LOCUS       XM_030245100           10403 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus synapsin III (Syn3), transcript variant X7,
            mRNA.
ACCESSION   XM_030245100
VERSION     XM_030245100.2
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000076.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_030245100.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10403
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="10"
     gene            1..10403
                     /gene="Syn3"
                     /note="synapsin III; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 EST, 100 long SRA
                     reads, 1 Protein, and 85% coverage of the annotated
                     genomic feature by RNAseq alignments, including 1 sample
                     with support for all annotated introns"
                     /db_xref="GeneID:27204"
                     /db_xref="MGI:MGI:1351334"
     CDS             9260..10099
                     /gene="Syn3"
                     /codon_start=1
                     /product="synapsin-3 isoform X4"
                     /protein_id="XP_030100960.1"
                     /db_xref="GeneID:27204"
                     /db_xref="MGI:MGI:1351334"
                     /translation="MNFLRRRLSDSSFVANLPNGYMPDLQRPESSSSSPASPATERRH
                     PQPLAASFSSPGSSLFSSFSGAMKQTPQAPSGLMEPPTPVTPVVQRPRILLVIDDAHT
                     DWSKYFHGKKVNGDIEIRVEQAEFSELNLAAYVTGGCMVDMQVVRNGTKIVRSFKPDF
                     ILVRQHAYSMALAEDYRSLVIGLQYGGLPAVNSLYSVYNFCSKPWVFSQLIKIFHSLG
                     PEKFPLVEQTFFPNHKPMSPASIGSMESSSPCGALVVRTNFGPHVPGTSPHPALHQEK
                     TVM"
ORIGIN      
        1 gatcatggga gcactgggtc tggccactgt gattcaggac tgcatggtcc agtctcttta
       61 gaatgctgcc gctgtcattg tcaccctgag cagcctcctg tacaatctat cttcttcttt
      121 tgttactatt ggttgagtga gcattctgtc ctaaggattg gaggtgaatg gcagatggga
      181 caaactgtgg aagattctgt cccggggaat agtcaggctt tcacgcagtg aaaattaacc
      241 atcaaaaaga tggagagata cagggagtgg agatatggtt cagtggttaa gagtatgcac
      301 tgcccttgca ggaggcctga gttcagttct aagcacccag gtgtaacccc tgctccaggc
      361 aggtcccttt ctctgatctc tgcatctcta caggaacctg tactcatgtt cacaagccta
      421 catacacata attaaaaata agtaactcat ttttaaaata tatggaagta aaaaataaat
      481 gacattttct agaaagcaat cctttagctg gtgctcagct tgctgctgct gatggttgag
      541 aagcaatgac ttggcatctt ctacctcaca agtccttgta caacctacag ggccaaaccc
      601 agagatttat gaaatcatct gctgtttctc cgaatttaaa cctttcaggt gagaacagta
      661 ggggcaaagg gattgcttct ccgggggctg attactgttt gtaggcctct ttcattattc
      721 aaggttcatg cacagaaata aaaatgctaa gtggcactga cctccagggc atgatggaag
      781 aataccatta atggaaaaac ccttggtgat gtatactgag cactgctcag caaacactga
      841 ccctgcattg aatctgcacc ttttcttata tatagtgcaa tcaaacataa gtactcgtgc
      901 agtaatttgc ctggcttctc ttctaaacct ttgtccaact ccttccttcc ttagaaacgg
      961 aaggttcttt agaattcttg tcctggcaag aattcccctt ccatttttcc aagtactttt
     1021 tctgtgcacc tttaacacca gtggtgtttt ttttttaaat aactacattt ataggtcttt
     1081 atattgcagc tagaaatgga tgtggtgtca cgtgtctttt aactcagcac tcaagagaca
     1141 gaggcaggtg gacctctatg agtttgaggc cagcctggtc tacatagtga gttccaggcc
     1201 agccagaact acatagagaa accctgtctc taaaatcaaa ccaaatactg gaggacagag
     1261 agccttaaag gagacctgct ttgaatttct gagggacctt gaggcataga agtgacacat
     1321 gagacaggga cctgccaaat atcctcccat tctgtgctgg ttaagctttt caattgcctt
     1381 attttccaat ctgtaatttc ttttaacctt gtagtcttaa ttctcatctc acaaatctcc
     1441 tctatggaga ggcctggcat agtcccgaca tcccttttgt gttctcatta cacatctcta
     1501 tcagtttaca gcaagctgac attatctttt gtttgtgcac ttgtatgtaa ccaactcctc
     1561 ctcatgccat ccccagccag ggtaagagct tagctccttg tgcttgtact cctatgacat
     1621 ttgctgacag ctgactcact ggtctctcag aagctcctac taaggcccag ggaagtcagg
     1681 tgactttctc caagctggct tcctaggata ctgaactgca ttattcacac tccctgaggg
     1741 gcatctcaat cctcctggga tgaagaaaga tcgtccactt ggccacttga ggccagcaac
     1801 agcaaagctt gcttgctcta gcaactttcc ctacctggct ggcgagggaa agcctagaga
     1861 ctgagaaagg aggggcttga ggggcgggcc tggatgcagg gcccctgttg gcccagccaa
     1921 tgggctctcc ggcgtaggga gaccagtctg cccagaggag gcgctcacgt actgtgcagg
     1981 gcagaggcag agcgcgcaag ctgcagcgct cccgcagatc ctgtaattgg cggcgccagt
     2041 ccgaggtaca cacgggccac cgtagctggc actgtcggta agccaaggca aagtggagta
     2101 ggtgggtttt ctggccttag ggagcactca ccccgaatcc gagctgttgg tgcgtcctcg
     2161 ggcagtgcta cttccccata agctctctct tttgttagcc gaatgttgat gctgcatgtt
     2221 ggtggggtgc aggtgctccg tgagcccgga gtgccaccct ccggtcccag gctgctgctg
     2281 ccggtcccta gcactggtcc ctgtagagta ccggaaccct ggggccctca aagctatgac
     2341 tactgaggta ttcaacccaa catccagacc tgtcccggaa aagagcttcc tctgggaagc
     2401 tgagaccaca acagatactg gtgctctgca ctggatccca gcacctgctc taggcaggtc
     2461 cctcaggacc tgttgccttg ggtctggggc tcagatctgt tgcgcagtct tctatttcca
     2521 gctatcctga gacgaaggaa aaaaccttgg agggttttcc tggccaggct aagactaaca
     2581 ctgctggagc gccctggtta tttattcatg acttacttgg ctgtaagcca gacactatgc
     2641 tctcagctct agcggcctta aaggaatctc aggagttgct ggggcctacc agggatgata
     2701 ggataggagg gattgcagtg tggtgtagtg cagacagcaa gaggtgggtg ggtcgtgatg
     2761 cagcctggaa gacacacaga gactggagag tttgccagcc tgagagctgt ggaatcagag
     2821 gcatcaggga caggaagaat ttcaggtaga ttttcccatg tgcagacgaa agaagtgaag
     2881 aactcagaat ctcagctaat caaacagcag attgcacagt agaaccagga cttgcagatg
     2941 ggacctaaac tgcaaggtag aaggggctag ccaaaaatgt acacaatcta gagatgcatg
     3001 cagcctgaca agtttatcct aggacacggg aggctgggaa agaattccag ctgatcccac
     3061 agccactctg ctagctctgt ggacagtgac tggagctggc atcttcaagc tagtaagttg
     3121 tgaaaagctg gttttcaggc aacgtggctg caaatactct ggccccttaa ggctgactat
     3181 ctgacagggg ctctgtaacc ctagcttctg ggcatgaatt caggcaggga gatgctgtca
     3241 tgtgatgctt gctcctgtca ttgtattgga agctgtggcc tctatcttgt catcggggat
     3301 agcccttggg gagttggata gagcatctgt gctcactttc tgatgcctgg tccctgtgtg
     3361 agaacttctg ccttacctgg gcttaccttt ctatcttcca gggccaaggg gctgctgttt
     3421 gggttgccat atagagactg gtatagcggc aataaaaaag gctcctagga agtgagacca
     3481 gaaagccact tcatctattt gccttaaaga catttttgac cttgtgggtc tctctctctc
     3541 tctctctctc tctctctctc tctctctctc tctgtgtgtg tgtgtgtgtg tgtgtgtgtg
     3601 tgtgtgtgtg tgaggagatt attttaccta gttgtcataa gcaaggttcc ttgtttaaaa
     3661 ggtcagagat gctaagctag tcacttttaa attgttaatt tgccttaacc tagaatgccc
     3721 aaggaataac atctcgatga gggattgatg tctagatgag actgccctgt acgtacatct
     3781 gtcagataat gcctttattt gtcagttgat tcatgggaag tcctagctca tggtgagcca
     3841 tgctcctctc tgatagtgag tcctggatgg tgtaggtatg gaggaaggac gctggacagt
     3901 aggcaagtgt ttattctttc tctgccttgc ttgtagctat gatccgctcc cacaagttcc
     3961 tgccagcttg acataccccc aaaatacggt ctgtagcctg aacttgtgaa ttaaaataaa
     4021 ccctttctta cccaagttgc tttgtgatat tttagcacgg cagctggaat ggacacagaa
     4081 ctggtgcatg tctgggtacc agtagttgct ctaccgttca agtgaataca cagtgggggt
     4141 agtggggcca ggcacaggta gacactggtc catgacggag gggaaaagca gattcaggct
     4201 accctctgag gctttcgaaa gccacactaa ccagccagta agtatggtgt gcccaccgag
     4261 gggttcaact taaggtgtcc cgtcagccaa acagtttcta aacagagaca catatatgag
     4321 ctataagcag tcagaactcc tggctgctgg acattaggag gtaacacgca tcttggtctt
     4381 gtggggagga cgtggatgtt tttctacgcc attgattctc tgtgtcactg tatgacattg
     4441 ggaaaaaaaa tgaggatggt ttggactggt cacttagaat gtttccctgg cttttgaatt
     4501 tctttactgc ctctgaaagt acatgctgag ctcggcgact tattactgtg agacatcttt
     4561 actaataacc ccagtgacta gagactccta ccgagtgctt gttaggtatg tgtgccctct
     4621 cccagttgcc ccacaacatg cggtgttatt ctccattttt aataaagaaa acacttttat
     4681 tctcagttgg tagccatctc agtgttttca agcccaatgg agtccctagg aaagtgagag
     4741 tgacagcacc catcatggca tgtcacttgt tacactttaa aagatgctct tattgatgag
     4801 tcactcatta atccaaccac ttggtaatcc aatcaatctg tttgggaggc tgtgccacac
     4861 agggagatac aggtctgtct gctaagggag ggagagtggt gtggtgagca ctgtggactt
     4921 taaaagaaaa tattgaagga tgggccgttg ctttgtatgg catataggag agaaagggtt
     4981 tttgtttttt gttttttgtt ttgatctccc ctgagtgact ctagttcaat gcagcctcct
     5041 tggaaagact accctgttgg aagtgaacac cttccttccc tttccttctc cctttacagc
     5101 actttttagt tttattcact tccctttatt gctcttcctc actacaccac agtctccagg
     5161 caatgcaaag ctgcttcatc cctgcagtcc agcactgtta agtgcatcct tcttcattgc
     5221 acgtatggat ggatggttga gctatggaaa ctgaacccag aaatccttcc atgctagata
     5281 catcacctac cctgagctat gcctccatcc cagcatgtat acccgtatat ctggaaggat
     5341 gaaatgaatg gtagatttgt ttcacaggat tatcagggaa ggtctctctc tctctctctc
     5401 tctctctctc tctctctctc tctctcacac acacacacac acacacactt tttctctctc
     5461 tctcttgctc tctcactctc tctctctccc ccctccttcc ctctttccct ccttctcaac
     5521 tcatgtctct gtgcctgtgc gtgatattta tgttgataca tgatactcag caaagctacg
     5581 atcaggaagc agaaaggata gcttgcctgt gaaccatgag gcagaggcag ctcactgtag
     5641 cggaaacatc actcaagggt tgcttcaagc cagttgagat gcatttgaag ttgcttggcc
     5701 ttggaggcat actgagtaca gatttactca aagcgcaacg aagctagtga aatattttaa
     5761 cccaagtaat gacctaatat aatataatgt tatgtgcttg ttgatatttt ttttttttgg
     5821 ccttgcctcc aagaggcgag ctctgtaaag aaagaggcca aggtactata gttaaatgaa
     5881 tgtatgatct agcttaagtt ttcacagtat cccaatagct acatctatat taaataatga
     5941 agtcttgaca ccaactagaa gttagggggt tactgaggta tgggcgtctt atgtaagcag
     6001 agggaaagag cagaaggatt tgaactatat tttgacagaa tggataggat ttgctgctat
     6061 agttgattgg agatatacag aaaaaagaaa cgtcatgact gttaggctta tggtttagga
     6121 ttggcttgat gaaagatctc tatcacaggg tgaatggatg gatgaagtgt gccatatgga
     6181 cacaatgaac tgttagtcag aaaataatca aagtaattat aatacatgct acggtataaa
     6241 tggacattgt cagcactgca aaaatataaa taaaagaagg cagacacagg gctggagaga
     6301 aagcttggtg ggtaaagtgc ttgctgccca agaatgagga gctgaggtcc gatcttcacc
     6361 catgtaaata ggctgagtgt ggtggcgtgc acctataaca ctgcattagc aggagagagc
     6421 aggagcttcc tggcgaggca gcctattaga agcagtgact ccagacttgg agaaagagtc
     6481 tgtctcaaaa ggtagcgaaa gccattacac cctctatcca tagcctatgt acatgcagtc
     6541 ctgagtaagt gtgcaaatac atgcctgcag acacacacac acacacacac acacacacac
     6601 acacagagag agagagagag agagagagag agagagagag agagagagag agagaacgtg
     6661 tacataaaaa gccagaagct gcacagtgcc accattgtcc atgtgtttat atccatagac
     6721 acaagaagga aaacagcatt tgacacaggc taaggatgag ccggagtggg tgaatggtgt
     6781 cctttttagc agtgatgagg ctttggaact aggtggagtt agggattttc tacagtatga
     6841 aggtgctaag tgccacaaaa tcatgttctt caaagtgctt agttgtgtgc catgtaagat
     6901 caacttttca aaggttagat ggatagtatg ggtgttttga cagtggggag accgggggaa
     6961 agcgggctgt ttggggttgg actactgaaa tgcaccacac atccatgagg agcatgcatt
     7021 taatgtgggt ctctggtcta gcagacaatc ctgggctggg atgtagaaaa cagttgtcag
     7081 ctcttagatg tcaaccatga aacacatgaa ttcttgtgac aaaggataca gaggaaaaca
     7141 ttaacatgct gggccatcct ttaatgtgat actcatggct tccctagaaa gaaggtactg
     7201 tggtcctttt ttcagacaaa ggaaacaaaa gtaaaactgc cacctcgatc aagatgacca
     7261 agatcagaca gttaactcat gtgggtccca ggcctccagc cttctgcctt tctcatccca
     7321 gcatgatgat ccgtttagaa cttccacaca agcctttccc tctggcccca ttctccctgt
     7381 caggcacgac tgagtattca tgcacggcag gccctgttct gagcatatgt gggtggaatg
     7441 ggtagacaca gctttaatag catcaagctg atccaggaaa caagcaagca cagttcccag
     7501 atgcaggacc caagaagcac ggagagagcg ccactctccc aggtttatat gtaggagagg
     7561 gattcctagg gaacttgtta gtgaggctga ggtttgcagt actagcagat ggaatgaact
     7621 tgagggagac aaggatttct agaacagctg gcagcctctg aaaatactct gtatgagaat
     7681 tcacttccag ttctctgttc ttctcaggct ctggcacttg aagctcatca actatatcaa
     7741 taatttctgg gatctagcag accatgctag acaaatgcaa aatgcaaatc acatggccaa
     7801 gcttaacttt aacttcatgc tgggcatagt ggttgaggcc tttagtccct gaagtcaagc
     7861 tagaggccgc tggatctctg tgagttccac agggaattaa gataaggtac gacagcctgg
     7921 ccttcaaagt gaaccccagc tcttgggcaa attacttagg ttttcttttt gtccagtgtt
     7981 aatgactgac ctgagacctc attccgggta ggttggtact ctaccatgga gcccagctgt
     8041 agcactcttt ttacctctta ttttcagaca tgatctcact ctgttctgaa ggttggtctt
     8101 gaacttcctc tgtacttcaa cctatccttg aacaagccat cttccttcct tggcctcctg
     8161 ggtagctgga atggcagacc tatgccagga ggcctggcta gaccttattt gtgaaaggag
     8221 agacataatg tccactgttc agagtaggac atgaatgaga agagccacca agtgttgagt
     8281 gtattatata agctcagaaa aaaaaatatc accacccttg gcaaagaaga gttctaggtg
     8341 cactgggtcc cctgtttttt ttatactgtt gaaatagata gccacatacc ctctaaaggt
     8401 tgtggtatgg ataatttgaa gtgtatcact ataaactatg tgtttaggat gcccttcaga
     8461 ggaatcagat ttaaaaaaag aaaacaagtt gaggaaacac tggtataaac caaatccttt
     8521 tgggtttgat aagtaggaaa gggttaagca tctagaaata ggattttgcc ttttagaaat
     8581 tattagccaa tgagggagct cactggtgat gtaatgcctg ggggcgggca ctccattggt
     8641 taaatgtatt gtttctctgg cttcactgag aagcagacct ggaacagagg ggttaatcat
     8701 tcttcctctc tctctctctc tctctctctc tctctctctc tctctctctc tctctctctc
     8761 tccctctctc tctctctcat attcctcctc tcctcagtgt gaagaaatag cagtgctcag
     8821 cacactgttg gcatttgctt tccaataaaa gccatactcg cctcctgcct ccctcccaag
     8881 tagagcacat gttccagtag tactacagag gaggacctag gagggggtgg gaagagtggg
     8941 aggtggagga ggaggaggag ttgttcttta gatgaaagag agcccctttg cagggctgta
     9001 gcctctccat gccacctggg atgggcacgg ctccacatgc ccccaaatga attgtttaac
     9061 agccaactgc ttctgagcat tgttcaacct ggagggatcc tcagaactag gagataaaca
     9121 gagtcctggg aagtccactt ctcatggtgc agaagctctc tctgacccca agcctccagc
     9181 tccccgtaac tggcaacctg agcttcaaac ctcatcgagt tgattctgtg tggaaggaga
     9241 attcccatct attgcagcca tgaacttcct ccggaggcgg ctgtctgaca gcagctttgt
     9301 ggccaacctg cccaatggct acatgccgga cctgcagcgc ccagagagct ccagtagctc
     9361 tccagcatcc ccggccacag agaggaggca cccccagccc ctggctgcct ccttctcatc
     9421 tccaggatcc agcctgttca gctccttctc cggtgccatg aaacagaccc cacaggctcc
     9481 ctcagggctg atggaaccac ccactcctgt cacacccgtg gttcagagac ccaggatctt
     9541 gttggttatc gatgacgccc atacagactg gtcaaagtat tttcatggga agaaagtgaa
     9601 tggcgacatt gagatccgag tggaacaggc tgagttctct gagctgaacc tggctgctta
     9661 tgttaccgga ggctgcatgg tggacatgca agttgtgaga aatggcacca aaattgtgcg
     9721 gtccttcaaa cctgacttca tcctggtccg acagcatgcc tacagcatgg ccctggctga
     9781 ggactaccgg agcctggtca tcggcctcca gtatggaggg cttcctgctg tcaactctct
     9841 ctactccgta tacaacttct gcagcaagcc ttgggtgttt tctcagctca ttaagatctt
     9901 ccattccttg ggtcctgaga aatttccact agtggagcaa acatttttcc ccaaccacaa
     9961 gccaatgagc ccagcaagca ttggctcaat ggaatctagc agcccatgtg gagccctggt
    10021 tgtcagaacc aactttggtc cacatgtccc tggaacaagc ccacaccctg ctcttcatca
    10081 ggagaagaca gtcatgtgac aacagcatag aacacagtgt ggcactgaaa gcaagagact
    10141 tagatgtcgc tgctgcaaga caaggaattc aacagatggc cagcaatcca ccagaagctc
    10201 agacatggcg cttctgactg tggcctcgcc aacttcatag gctcagactc ctatcctcca
    10261 gtcctgtaag acaataaacc cttgccattt taaactgctt ggtccatgat gtgtcactta
    10321 gagaaaaccc aatgagctca ggctaggagg atgagtcagt caataaagtg cttgccttgc
    10381 aaactcaagg acctaagact tat
//
