LOCUS       NM_011509                710 bp    mRNA    linear   ROD 03-JUN-2024
DEFINITION  Mus musculus SPT4B, DSIF elongation factor subunit (Supt4b), mRNA.
ACCESSION   NM_011509 XM_001476078
VERSION     NM_011509.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 710)
  AUTHORS   Chiang,P.W., Zhang,R., Stubbs,L., Zhang,L., Zhu,L. and Kurnit,D.M.
  TITLE     Comparison of murine Supt4h and a nearly identical expressed,
            processed gene: evidence of sequence conservation through gene
            conversion extending into the untranslated regions
  JOURNAL   Nucleic Acids Res 26 (21), 4960-4964 (1998)
   PUBMED   9776760
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            EL607674.1 and AC153729.1.
            
            On Jan 22, 2010 this sequence version replaced NM_011509.1.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript is intronless :: W30554.1, BY041647.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-397               EL607674.1         315-711             c
            398-398             AC153729.1         189070-189070       c
            399-687             EL607674.1         25-313              c
            688-710             AC153729.1         188758-188780       c
FEATURES             Location/Qualifiers
     source          1..710
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="10"
                     /map="10 17.4 cM"
     gene            1..710
                     /gene="Supt4b"
                     /gene_synonym="100041294; Gm3258; Supt4h1b; Supt4h2"
                     /note="SPT4B, DSIF elongation factor subunit"
                     /db_xref="GeneID:100041294"
                     /db_xref="MGI:MGI:1335090"
     exon            1..710
                     /gene="Supt4b"
                     /gene_synonym="100041294; Gm3258; Supt4h1b; Supt4h2"
                     /inference="alignment:Splign:2.1.0"
     CDS             271..624
                     /gene="Supt4b"
                     /gene_synonym="100041294; Gm3258; Supt4h1b; Supt4h2"
                     /note="transcription elongation factor SPT4 2; DSIF small
                     subunit 2; DRB sensitivity-inducing factor small subunit
                     2; suppressor of Ty 4 homolog 2; suppressor of Ty 4B"
                     /codon_start=1
                     /product="transcription elongation factor SPT4-B"
                     /protein_id="NP_035639.1"
                     /db_xref="GeneID:100041294"
                     /db_xref="MGI:MGI:1335090"
                     /translation="MALETVPKDLRHLRACLLCSLVKTIDQFEYDGCDNCDAYLQMKG
                     NREMVYDCTSSSFDGINAMMSPEDSWVSKWQRVSNFKPGVYAVSVTGRLPQGIVRELK
                     SRGVAYKSRDTAIKT"
     regulatory      612..617
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Supt4b"
                     /gene_synonym="100041294; Gm3258; Supt4h1b; Supt4h2"
                     /note="hexamer: AATAAA"
     polyA_site      655
                     /gene="Supt4b"
                     /gene_synonym="100041294; Gm3258; Supt4h1b; Supt4h2"
                     /note="major polyA site"
ORIGIN      
        1 taggtacaaa aagggatcaa taaaaattat ttttaaattg atttttttat taaactaatg
       61 aaatttactt aaaaatatac aactcagtat taacattttt aagtcatcaa aataatttat
      121 agtagttaaa tgcctcttaa atatacatga tatcttctga agctaagact aatacacact
      181 caaccagttt taaaaatcta tttggaacat taaacatgat agaagtagaa aaaagcggct
      241 ggaggaacct gtgttgtcgc atcggtgagg atggccctgg agacggtacc gaaggacctg
      301 cggcatctgc gggcttgttt gctgtgctcg ttagtcaaga ctatagacca gtttgaatat
      361 gatgggtgtg acaattgcga tgcataccta caaatgaagg gcaacagaga gatggtttat
      421 gactgcacca gctcttcatt tgatggaatc aatgcgatga tgagtccaga ggacagctgg
      481 gtctccaagt ggcagcgagt cagtaacttt aagccaggtg tatatgctgt gtccgtcact
      541 ggtcgcctgc cccaaggaat cgtgcgggag ctgaaaagtc gaggagtggc ctacaaatcc
      601 agagacacag caataaagac ctagctaggt gcaggccata gcatcttgtt cttcacttct
      661 gtacttgttt tcttgtggaa ctaaaccggt gggaccccaa agactccccg
//
