LOCUS       XM_030252189            1086 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus Sad1 and UNC84 domain containing 5 (Sun5),
            transcript variant X3, mRNA.
ACCESSION   XM_030252189
VERSION     XM_030252189.2
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000068.8) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_030252189.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1086
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="2"
     gene            1..1086
                     /gene="Sun5"
                     /gene_synonym="1700021O15Rik; Spag4l; SPAG4L-2; SRG4"
                     /note="Sad1 and UNC84 domain containing 5; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 8 ESTs, 2 long SRA reads, 2 Proteins, and 91% coverage
                     of the annotated genomic feature by RNAseq alignments,
                     including 1 sample with support for all annotated introns"
                     /db_xref="GeneID:76407"
                     /db_xref="MGI:MGI:1923657"
     CDS             118..1062
                     /gene="Sun5"
                     /gene_synonym="1700021O15Rik; Spag4l; SPAG4L-2; SRG4"
                     /codon_start=1
                     /product="SUN domain-containing protein 5 isoform X3"
                     /protein_id="XP_030108049.1"
                     /db_xref="GeneID:76407"
                     /db_xref="MGI:MGI:1923657"
                     /translation="MAEPAPANMTWLTYLACFLRTQTQQVFLNTCRCKLFCQKVMEKM
                     GLLVLCVFGFWMFSMHLPSKVEVWQDDSINGPLQSLRMYQEKVRHHTGEIQDLRGSMN
                     QLIAKLQKMEAISDEQKMAQKIMKMIQGDYIEKPDFALKSIGASIDFEHTSATYNHDK
                     ARSYWNWIRLWNYAQPPDVILEPNVTPGNCWAFASDRGQVTIRLAQKVYLSNITLQHI
                     PKTISLSGSLDTAPKDFVIYGLESLPREEVFLGAFQFQPENIIQTFQLQNLPPRSFAA
                     VKVKISSNWGNPRFTCMYRVRVHGSVTPPKDSHLEPLS"
ORIGIN      
        1 gtgtagaact ctcagctcct ccagcaccat gcatgcctgg atgctgccat gctcctgcct
       61 tgatgtcaat ggactgaact tctgatcctg ggcgtccaaa gaagctatat cagcagaatg
      121 gcagagccag ccccggcaaa catgacctgg ctcacctacc tagcctgctt cctgaggact
      181 cagacccagc aagttttcct taacacctgc agatgcaagt tgttctgcca gaaagtcatg
      241 gaaaagatgg gccttctggt cctctgtgtt tttggcttct ggatgttttc catgcactta
      301 ccatcaaaag tggaagtctg gcaggatgac agcataaatg gtccattgca gagcctgagg
      361 atgtaccagg agaaggtacg acatcacact ggggaaatcc aggacctacg aggtagcatg
      421 aaccagctca ttgccaaact ccagaagatg gaagccatat ctgatgagca aaaaatggcc
      481 cagaaaataa tgaagatgat tcaaggtgat tacattgaaa agccagactt tgccctgaag
      541 tccatagggg ccagcatcga cttcgagcac acgtcagcca cgtataacca cgacaaggct
      601 cgctcctact ggaactggat ccgactgtgg aactacgcgc agcccccgga tgtgatcctt
      661 gagccaaacg tgacacctgg gaactgctgg gcctttgcca gtgaccgcgg ccaggtgacc
      721 atccgtttgg cccagaaagt ctacctgtcc aacattacac tgcagcacat tcctaagaca
      781 atctcgttgt cgggaagcct ggacaccgca ccaaaggact ttgtcatcta tggcttggag
      841 agcctaccca gggaggaagt gttcctaggg gcattccagt ttcagccaga aaacatcatc
      901 caaacgtttc agctccagaa cctgccaccc aggagctttg ctgcagtcaa ggtgaagatc
      961 tccagcaact gggggaaccc tcgcttcacc tgcatgtacc gtgtgcgtgt gcacggctct
     1021 gtaacccctc ccaaagactc acacctagag cccctatcct agagtaaagt atattattca
     1081 gtccaa
//
