LOCUS       NM_016771               2410 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Mus musculus sulfotransferase family 1D, member 1 (Sult1d1), mRNA.
ACCESSION   NM_016771
VERSION     NM_016771.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2410)
  AUTHORS   Monien,B.H., Sachse,B., Meinl,W., Abraham,K., Lampen,A. and
            Glatt,H.
  TITLE     Hemoglobin adducts of furfuryl alcohol in genetically modified
            mouse models: Role of endogenous sulfotransferases 1a1 and 1d1 and
            transgenic human sulfotransferases 1A1/1A2
  JOURNAL   Toxicol Lett 295, 173-178 (2018)
   PUBMED   29908303
  REMARK    GeneRIF: Sult1d1 knockout did not influence furfuryl alcohol
            bioactivation or the formation of hemoglobin adducts.
REFERENCE   2  (bases 1 to 2410)
  AUTHORS   Mori,K., Nakamura,H., Kurooka,H., Miyachi,H., Tamada,K., Sugai,M.,
            Takumi,T. and Yokota,Y.
  TITLE     Id2 Determines Intestinal Identity through Repression of the
            Foregut Transcription Factor Irx5
  JOURNAL   Mol Cell Biol 38 (9), e00250-17 (2018)
   PUBMED   29463648
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 2410)
  AUTHORS   Sachse,B., Meinl,W., Glatt,H. and Monien,B.H.
  TITLE     The effect of knockout of sulfotransferases 1a1 and 1d1 and of
            transgenic human sulfotransferases 1A1/1A2 on the formation of DNA
            adducts from furfuryl alcohol in mouse models
  JOURNAL   Carcinogenesis 35 (10), 2339-2345 (2014)
   PUBMED   25053625
REFERENCE   4  (bases 1 to 2410)
  AUTHORS   Fossat,N., Tourle,K., Radziewic,T., Barratt,K., Liebhold,D.,
            Studdert,J.B., Power,M., Jones,V., Loebel,D.A. and Tam,P.P.
  TITLE     C to U RNA editing mediated by APOBEC1 requires RNA-binding protein
            RBM47
  JOURNAL   EMBO Rep 15 (8), 903-910 (2014)
   PUBMED   24916387
REFERENCE   5  (bases 1 to 2410)
  AUTHORS   Bendadani,C., Meinl,W., Monien,B., Dobbernack,G., Florian,S.,
            Engst,W., Nolden,T., Himmelbauer,H. and Glatt,H.
  TITLE     Determination of sulfotransferase forms involved in the metabolic
            activation of the genotoxicant 1-hydroxymethylpyrene using
            bacterially expressed enzymes and genetically modified mouse models
  JOURNAL   Chem Res Toxicol 27 (6), 1060-1069 (2014)
   PUBMED   24802129
REFERENCE   6  (bases 1 to 2410)
  AUTHORS   Teramoto,T., Sakakibara,Y., Inada,K., Kurogi,K., Liu,M.C.,
            Suiko,M., Kimura,M. and Kakuta,Y.
  TITLE     Crystal structure of mSULT1D1, a mouse catecholamine
            sulfotransferase
  JOURNAL   FEBS Lett 582 (28), 3909-3914 (2008)
   PUBMED   18977225
  REMARK    GeneRIF: Data obtained indicated that mSULT1D1 comprises of a
            single alpha/beta domain with a five-stranded parallel beta-sheet.
REFERENCE   7  (bases 1 to 2410)
  AUTHORS   Freimuth,R.R., Wiepert,M., Chute,C.G., Wieben,E.D. and
            Weinshilboum,R.M.
  TITLE     Human cytosolic sulfotransferase database mining: identification of
            seven novel genes and pseudogenes
  JOURNAL   Pharmacogenomics J 4 (1), 54-65 (2004)
   PUBMED   14676822
REFERENCE   8  (bases 1 to 2410)
  AUTHORS   Tsoi,C., Falany,C.N., Morgenstern,R. and Swedmark,S.
  TITLE     Identification of a new subfamily of sulphotransferases: cloning
            and characterization of canine SULT1D1
  JOURNAL   Biochem J 356 (Pt 3), 891-897 (2001)
   PUBMED   11389699
REFERENCE   9  (bases 1 to 2410)
  AUTHORS   Nagata,K. and Yamazoe,Y.
  TITLE     Pharmacogenetics of sulfotransferase
  JOURNAL   Annu Rev Pharmacol Toxicol 40, 159-176 (2000)
   PUBMED   10836131
  REMARK    Review article
REFERENCE   10 (bases 1 to 2410)
  AUTHORS   Sakakibara,Y., Yanagisawa,K., Takami,Y., Nakayama,T., Suiko,M. and
            Liu,M.C.
  TITLE     Molecular cloning, expression, and functional characterization of
            novel mouse sulfotransferases
  JOURNAL   Biochem Biophys Res Commun 247 (3), 681-686 (1998)
   PUBMED   9647753
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AI118913.1, AK133530.1 and BC066190.1.
            
            On May 15, 2008 this sequence version replaced NM_016771.2.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC066190.1, BC010752.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849380, SAMN01164135
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-504               AI118913.1         13-516
            505-1607            AK133530.1         424-1526
            1608-1814           BC066190.1         1561-1767
            1815-2410           BC066190.1         1769-2364
FEATURES             Location/Qualifiers
     source          1..2410
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="5"
                     /map="5 43.56 cM"
     gene            1..2410
                     /gene="Sult1d1"
                     /gene_synonym="5033411P13Rik; ST1d1; SULT-N; Sultn"
                     /note="sulfotransferase family 1D, member 1"
                     /db_xref="GeneID:53315"
                     /db_xref="MGI:MGI:1926341"
     exon            1..210
                     /gene="Sult1d1"
                     /gene_synonym="5033411P13Rik; ST1d1; SULT-N; Sultn"
                     /inference="alignment:Splign:2.1.0"
     exon            211..367
                     /gene="Sult1d1"
                     /gene_synonym="5033411P13Rik; ST1d1; SULT-N; Sultn"
                     /inference="alignment:Splign:2.1.0"
     CDS             220..1107
                     /gene="Sult1d1"
                     /gene_synonym="5033411P13Rik; ST1d1; SULT-N; Sultn"
                     /EC_number="2.8.2.9"
                     /note="N-sulfotransferase; amine N-sulfotransferase;
                     tyrosine-ester sulfotransferase; dopamine sulfotransferase
                     Sult1d1"
                     /codon_start=1
                     /product="sulfotransferase 1 family member D1"
                     /protein_id="NP_058051.3"
                     /db_xref="CCDS:CCDS39130.1"
                     /db_xref="GeneID:53315"
                     /db_xref="MGI:MGI:1926341"
                     /translation="MDNKLDVFRRELVDVEGIPLFWSIAEHWSQVESFEARPDDILIS
                     TYPKSGTTWVSEILDLIYNNGDAEKCKRDAIYKRVPFMELIIPGITNGVEMLNNMPSP
                     RIVKTHLPVQLLPSSFWKNDCKIIYVARNAKDVVVSYYYFYQMAKIHPEPGTWEEFLE
                     KFMAGQVSFGPWYDHVKSWWEKRKEYRILYLFYEDMKENPKCEIQKILKFLEKDIPEE
                     ILNKILYHSSFSVMKENPSANYTTMMKEEMDHSVSPFMRKGISGDWKNQFTVAQYEKF
                     EEDYVKKMEDSTLKFRSEI"
     exon            368..493
                     /gene="Sult1d1"
                     /gene_synonym="5033411P13Rik; ST1d1; SULT-N; Sultn"
                     /inference="alignment:Splign:2.1.0"
     exon            494..591
                     /gene="Sult1d1"
                     /gene_synonym="5033411P13Rik; ST1d1; SULT-N; Sultn"
                     /inference="alignment:Splign:2.1.0"
     exon            592..718
                     /gene="Sult1d1"
                     /gene_synonym="5033411P13Rik; ST1d1; SULT-N; Sultn"
                     /inference="alignment:Splign:2.1.0"
     exon            719..813
                     /gene="Sult1d1"
                     /gene_synonym="5033411P13Rik; ST1d1; SULT-N; Sultn"
                     /inference="alignment:Splign:2.1.0"
     exon            814..994
                     /gene="Sult1d1"
                     /gene_synonym="5033411P13Rik; ST1d1; SULT-N; Sultn"
                     /inference="alignment:Splign:2.1.0"
     exon            995..2394
                     /gene="Sult1d1"
                     /gene_synonym="5033411P13Rik; ST1d1; SULT-N; Sultn"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1774..1779
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Sult1d1"
                     /gene_synonym="5033411P13Rik; ST1d1; SULT-N; Sultn"
                     /note="hexamer: AATAAA"
     polyA_site      1792
                     /gene="Sult1d1"
                     /gene_synonym="5033411P13Rik; ST1d1; SULT-N; Sultn"
                     /note="major polyA site"
     regulatory      2371..2376
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Sult1d1"
                     /gene_synonym="5033411P13Rik; ST1d1; SULT-N; Sultn"
                     /note="hexamer: AATAAA"
     polyA_site      2394
                     /gene="Sult1d1"
                     /gene_synonym="5033411P13Rik; ST1d1; SULT-N; Sultn"
ORIGIN      
        1 gggagtttat actcatgggg cattttcagt aggtaaacag gggagcggcc ttagggaaat
       61 gaacattgtt catcatttct taagcttacc acaacttaat ttctttctca cattacgttg
      121 tgagctaccc agggacatca tccttttaaa gacttttcgg ttctgattct tcatctgaga
      181 aaactcattt aaagctccga gaatttaaag tctccccaaa tggataacaa actggatgtc
      241 ttcaggaggg agttagtgga tgttgaaggt atccctctct tttggagcat tgctgagcat
      301 tggtcccaag tagagtcatt tgaagcccgg cctgatgaca ttttgatctc cacatatccc
      361 aaatctggaa caacttgggt cagtgaaata ctggatttga tctacaacaa tggggatgca
      421 gagaaatgta aaagggatgc aatctacaaa cgagtaccat tcatggagct tataattcct
      481 gggataacaa atggagttga aatgctgaac aacatgccgt ctcctcgaat agtgaaaaca
      541 caccttcctg ttcagctgct tccttcctca ttctggaaaa atgactgcaa gattatttat
      601 gtggcacgga atgccaaaga tgtggttgtt tcttactatt atttctatca aatggcaaaa
      661 atccacccag agcctggcac ctgggaagag ttcctagaga aattcatggc tggacaagtg
      721 agctttggtc cctggtatga tcatgtgaag agctggtggg aaaaaagaaa agaatatcgg
      781 atcctttacc tgttttatga agatatgaaa gaaaatccaa agtgtgaaat tcaaaaaata
      841 ttaaagtttc tagaaaagga cataccagaa gaaattttaa ataaaatact ctaccatagc
      901 tctttcagtg taatgaagga gaatcctagt gcaaattaca ctactatgat gaaagaagag
      961 atggaccact ctgtgtctcc tttcatgaga aagggaattt caggcgattg gaagaatcag
     1021 ttcactgtag cccagtatga gaaatttgaa gaagattatg tcaagaaaat ggaagattca
     1081 acactgaagt ttagatcaga gatctaggga gagttggttt cttctcagtc tcttttgtca
     1141 ggcactaaca ttagagaaaa agcacattca tggttcagtc aaagaaaatg ttgtatatta
     1201 tttttctata cttactaaaa ctcttggtct tgaaatgtac agatatcagg taataattct
     1261 cttctaatta tcttccttac agaaaggttc atatagtagt ttccctttta ctttatgtta
     1321 tcaaaataat acaattttaa gaggctttat aacacagtat atttttagtt ttagttccta
     1381 atagcttcct gtctgaaata gtctcagtgg cctcctagag gaagattaca tttcattaat
     1441 taattcaact tcatctgtgg tgattttgca ttttaaaata ttatgttgtt aacattgcca
     1501 aattatttag attcattatg tcagaatatc ctgttttctc ttaaacctta tttagaaata
     1561 ttaaatttta atgaaaaaat caataaaacc cattttatag atttaaatta agaaaattag
     1621 agatctaatt attttatcct tcatttccta tattgaagct attgtgaaat ttattacaga
     1681 aaatgttgag gcttattcaa aatactccaa attattattc tattgtctat tttatgtcca
     1741 cttaggatca ctttttaaag gaaaactctg tacaataaac taatttccat aatctctctt
     1801 cttttttttt ttttattggg ttttggatca caccagggtc attttcatcc tcctgaaatt
     1861 aatcattcct gagtgagata aatactcatt tttgaactat cacgaaatat gaattcaaat
     1921 ccctttacat ttgacttcag gaactaatgt ttagtgaaaa atgaaaactt aaaaataaat
     1981 gaataaagta ctgtatgatt acattcaatg tataacattc ttgacatgag aaaattgttg
     2041 aagtggacag ctagttaatg gtaacataat ttaatgaaga actttaaagg acatgatagg
     2101 agtcacagaa cagcaacctg ggcaatattg ctgtagaaca agtagtctgt aatatattaa
     2161 tattctggca ttaataaaat gttataggct taccagatgt tactactgga gaaaatgtgc
     2221 taaaattata atttctgacc atttcatgct gattgtctca aattttacca ttatgtttaa
     2281 tgaatgtctt actattttta atttttttct aaagccaagg taattttaag taacaacacc
     2341 agtaatgact gtctaaaata aacatcctta aataaattca acaatgaatt aataaaaaaa
     2401 aaaaaaaaaa
//
