LOCUS       NM_026588               1205 bp    mRNA    linear   ROD 10-FEB-2025
DEFINITION  Mus musculus syntaxin 19 (Stx19), mRNA.
ACCESSION   NM_026588
VERSION     NM_026588.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1205)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 1205)
  AUTHORS   Roy,T.A., Bubier,J.A., Dickson,P.E., Wilcox,T.D., Ndukum,J.,
            Clark,J.W., Sukoff Rizzo,S.J., Crabbe,J.C., Denegre,J.M.,
            Svenson,K.L., Braun,R.E., Kumar,V., Murray,S.A., White,J.K.,
            Philip,V.M. and Chesler,E.J.
  TITLE     Discovery and validation of genes driving drug-intake and related
            behavioral traits in mice
  JOURNAL   Genes Brain Behav 23 (1), e12875 (2024)
   PUBMED   38164795
  REMARK    Publication Status: Available-Online prior to print
REFERENCE   3  (bases 1 to 1205)
  AUTHORS   Jones,M.R., Lingampally,A., Ahmadvand,N., Chong,L., Wu,J.,
            Wilhem,J., Vazquez-Armendariz,A.I., Ansari,M., Herold,S.,
            Ornitz,D.M., Schiller,H.B., Chao,C.M., Zhang,J.S., Carraro,G. and
            Bellusci,S.
  TITLE     FGFR2b signalling restricts lineage-flexible alveolar progenitors
            during mouse lung development and converges in mature alveolar type
            2 cells
  JOURNAL   Cell Mol Life Sci 79 (12), 609 (2022)
   PUBMED   36445537
  REMARK    Publication Status: Online-Only
REFERENCE   4  (bases 1 to 1205)
  AUTHORS   Dickinson,M.E., Flenniken,A.M., Ji,X., Teboul,L., Wong,M.D.,
            White,J.K., Meehan,T.F., Weninger,W.J., Westerberg,H., Adissu,H.,
            Baker,C.N., Bower,L., Brown,J.M., Caddle,L.B., Chiani,F., Clary,D.,
            Cleak,J., Daly,M.J., Denegre,J.M., Doe,B., Dolan,M.E., Edie,S.M.,
            Fuchs,H., Gailus-Durner,V., Galli,A., Gambadoro,A., Gallegos,J.,
            Guo,S., Horner,N.R., Hsu,C.W., Johnson,S.J., Kalaga,S., Keith,L.C.,
            Lanoue,L., Lawson,T.N., Lek,M., Mark,M., Marschall,S., Mason,J.,
            McElwee,M.L., Newbigging,S., Nutter,L.M., Peterson,K.A.,
            Ramirez-Solis,R., Rowland,D.J., Ryder,E., Samocha,K.E.,
            Seavitt,J.R., Selloum,M., Szoke-Kovacs,Z., Tamura,M., Trainor,A.G.,
            Tudose,I., Wakana,S., Warren,J., Wendling,O., West,D.B., Wong,L.,
            Yoshiki,A., MacArthur,D.G., Tocchini-Valentini,G.P., Gao,X.,
            Flicek,P., Bradley,A., Skarnes,W.C., Justice,M.J., Parkinson,H.E.,
            Moore,M., Wells,S., Braun,R.E., Svenson,K.L., de Angelis,M.H.,
            Herault,Y., Mohun,T., Mallon,A.M., Henkelman,R.M., Brown,S.D.,
            Adams,D.J., Lloyd,K.C., McKerlie,C., Beaudet,A.L., Bucan,M. and
            Murray,S.A.
  CONSRTM   International Mouse Phenotyping Consortium; Jackson Laboratory;
            Infrastructure Nationale PHENOMIN, Institut Clinique de la Souris
            (ICS); Charles River Laboratories; MRC Harwell; Toronto Centre for
            Phenogenomics; Wellcome Trust Sanger Institute; RIKEN BioResource
            Center
  TITLE     High-throughput discovery of novel developmental phenotypes
  JOURNAL   Nature 537 (7621), 508-514 (2016)
   PUBMED   27626380
  REMARK    Erratum:[Nature. 2017 Nov 16;551(7680):398. doi:
            10.1038/nature24643.. PMID: 29144450]
REFERENCE   5  (bases 1 to 1205)
  AUTHORS   Koscielny,G., Yaikhom,G., Iyer,V., Meehan,T.F., Morgan,H.,
            Atienza-Herrero,J., Blake,A., Chen,C.K., Easty,R., Di Fenza,A.,
            Fiegel,T., Grifiths,M., Horne,A., Karp,N.A., Kurbatova,N.,
            Mason,J.C., Matthews,P., Oakley,D.J., Qazi,A., Regnart,J.,
            Retha,A., Santos,L.A., Sneddon,D.J., Warren,J., Westerberg,H.,
            Wilson,R.J., Melvin,D.G., Smedley,D., Brown,S.D., Flicek,P.,
            Skarnes,W.C., Mallon,A.M. and Parkinson,H.
  TITLE     The International Mouse Phenotyping Consortium Web Portal, a
            unified point of access for knockout mice and related phenotyping
            data
  JOURNAL   Nucleic Acids Res 42 (Database issue), D802-D809 (2014)
   PUBMED   24194600
REFERENCE   6  (bases 1 to 1205)
  AUTHORS   Wang,Y., Foo,L.Y., Guo,K., Gan,B.Q., Zeng,Q., Hong,W. and Tang,B.L.
  TITLE     Syntaxin 9 is enriched in skin hair follicle epithelium and
            interacts with the epidermal growth factor receptor
  JOURNAL   Traffic 7 (2), 216-226 (2006)
   PUBMED   16420529
  REMARK    GeneRIF: Syntaxin 9 interacts specifically with the epidermal
            growth factor receptor.
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC023414.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC023414.1, AK076337.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849381, SAMN00849387
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1205
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="16"
                     /map="16 36.43 cM"
     gene            1..1205
                     /gene="Stx19"
                     /gene_synonym="A030009B12Rik"
                     /note="syntaxin 19"
                     /db_xref="GeneID:68159"
                     /db_xref="MGI:MGI:1915409"
     exon            1..275
                     /gene="Stx19"
                     /gene_synonym="A030009B12Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            276..1188
                     /gene="Stx19"
                     /gene_synonym="A030009B12Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             289..1167
                     /gene="Stx19"
                     /gene_synonym="A030009B12Rik"
                     /note="syntaxin 9"
                     /codon_start=1
                     /product="syntaxin-19"
                     /protein_id="NP_080864.1"
                     /db_xref="CCDS:CCDS28262.1"
                     /db_xref="GeneID:68159"
                     /db_xref="MGI:MGI:1915409"
                     /translation="MKDRLQELKQKTKEIELSRDGQVFVEEEQGVLVQQAVIYEREPV
                     AERHLHEIQKLQENINSFVDDVQRFGQQQKSLVASMRRFSLLKRDSTIAKEIKIQAEH
                     INRALGDVVKEVKKSEVENGPSSVVTRILKSQYAAMFRRFQQTMFLYNDTIALKQEKC
                     KTFIVRQLEVAGKEVSEEEVNDMLHHGKWEVFNESLLTETSITKAQLSEIEQRHKELV
                     NLENQVKDLRDLFIQISLLVEEQGESINSIEVMVNSTKDYVNNTKEKFGLAVKYKKRN
                     PCRALCCCCCPRCGSK"
ORIGIN      
        1 ggaacaggtg aggagcaggc agaacctgat tctccaggtg tgaggtaagc agtctgtgcc
       61 tctcacttca tagttacagc aaatggacaa ctttatcgcc gacttatttg acttcactgt
      121 ttggctttca attaactgta tgagaaccat aaagggagcc tgtggcttag actgatttag
      181 cattgggcca ggcattacac tccatggcac ttggattttc tctcggacta aggactctca
      241 caccccaggt gggaaaacaa gaacaagaca cccagggggt aaaggaagat gaaagaccga
      301 cttcaagaat taaaacagaa aaccaaggaa atagaactct ctcgggacgg tcaggtgttt
      361 gtggaagagg aacaaggggt gctcgtccag caagctgtca tttatgaaag agagcctgta
      421 gctgagaggc acctacatga gatccaaaaa ctgcaggaga atattaacag ttttgtggat
      481 gatgttcaac gatttggaca gcaacagaaa agtctagtgg cttccatgag aaggtttagt
      541 ctacttaaaa gagactctac cattgcaaag gagataaaaa tccaagcaga acacataaac
      601 agggcactgg gtgacgtagt caaagaagtg aaaaagtcag aggttgaaaa tggtccatca
      661 tcagtggtca caaggatact gaagtctcag tatgctgcga tgttccgccg cttccagcaa
      721 accatgtttc tatacaatga cacaatagct ttaaagcaag aaaaatgcaa aacgtttatt
      781 gttcgtcagc ttgaagtggc cggaaaagaa gtttctgaag aagaagtgaa tgacatgctt
      841 caccatggaa aatgggaagt tttcaacgaa agcttactta cagaaaccag tatcactaaa
      901 gcacagctct cggaaattga acagagacac aaggaacttg tgaatttgga gaaccaagtg
      961 aaggacctcc gggacctttt cattcagata tctcttctgg tagaggaaca gggagagagc
     1021 atcaacagca ttgaggtgat ggtgaacagc acaaaagatt atgttaacaa caccaaagag
     1081 aaatttggac tggctgtaaa atacaaaaaa agaaacccct gccgggccct gtgctgttgc
     1141 tgttgcccac gctgtggctc caaataaaga tgctacttta gaaacgttaa aaaaaaaaaa
     1201 aaaaa
//
