LOCUS       XM_006512888            3921 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus syntaxin 11 (Stx11), transcript variant X3,
            mRNA.
ACCESSION   XM_006512888
VERSION     XM_006512888.5
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000076.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006512888.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3921
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="10"
     gene            1..3921
                     /gene="Stx11"
                     /gene_synonym="5830405C08Rik"
                     /note="syntaxin 11; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 3 mRNAs, 3 ESTs, 64 long
                     SRA reads, 5 Proteins, and 96% coverage of the annotated
                     genomic feature by RNAseq alignments, including 10 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:74732"
                     /db_xref="MGI:MGI:1921982"
     CDS             160..1023
                     /gene="Stx11"
                     /gene_synonym="5830405C08Rik"
                     /codon_start=1
                     /product="syntaxin-11 isoform X1"
                     /protein_id="XP_006512951.1"
                     /db_xref="GeneID:74732"
                     /db_xref="MGI:MGI:1921982"
                     /translation="MKDRLAELQELSRSYDQQFPDGDNDFDAPREDIVFETDHILESL
                     YRVIQDIQDENQLLLIDVRRLGRQNVRFLTSMRRLSSIKRDTNSIAKAIKTRGEGIHQ
                     KLRSMKELSEQAEARHGAHSAVARISHAQYSALARAFQQAMYEYNQAEMKQRDNCKIR
                     IQRQLEIMGKDMSGEQIEDMFEQGKWDVFSENLLADLKGARAALNEIESRHRELLRLE
                     GRIRDVHELFLQMAVLVEKQEDTLNVIELNVQKTLDYTGEAKAQVRKAVQYKKKNPCR
                     TICCFCCPCVN"
ORIGIN      
        1 atgacgtact agactggagc tcctcctagg tgctttggac gctgctttgc tcttcgcgcg
       61 gagaatgagg tgtcttcaca cacagctcct ttacagctct ggggaagcag tagagagcgt
      121 agaaccggtc tacaggcaga gtcctagaag cctggcaaaa tgaaggatcg gcttgcagag
      181 cttcaagaat tgtccaggag ctatgaccag caattcccag atggggacaa tgactttgac
      241 gctcctcggg aggacatagt gttcgagacc gaccacatcc tggagtcctt gtacagggtc
      301 atccaggaca tccaggatga aaaccagctg cttctgatag acgtgaggcg cctggggagg
      361 cagaacgtcc gcttcctcac gtccatgcgg cgcctcagca gcattaagcg cgacaccaac
      421 tccatcgcca aggccatcaa gacccgaggc gaaggcatcc accagaagct gcgctccatg
      481 aaggagctga gcgagcaggc cgaggcccgg cacggcgcgc actcggcggt ggctcgcatc
      541 tcacacgcgc agtacagcgc gctggcccgc gctttccagc aagccatgta cgagtacaac
      601 caggccgaga tgaaacagcg cgacaactgc aagatccgca tccagcggca gctggagatc
      661 atgggcaagg acatgtcggg cgagcagatt gaggacatgt tcgagcaggg caagtgggat
      721 gtattctccg agaacctgct ggccgacttg aagggcgcgc gggctgcgct caacgagatc
      781 gagagccgcc accgcgagct cctgcgcctg gagggtcgca ttcgcgatgt gcacgagctc
      841 ttcctacaga tggccgtgct agtggagaag caggaggaca cgctgaacgt catcgagctt
      901 aacgtgcaga agaccctcga ttacacgggc gaggccaagg cgcaggtgcg caaggcggtg
      961 cagtacaaga agaagaaccc ctgcaggacc atctgctgct tctgttgtcc ctgtgtcaac
     1021 tagccgctgg cttgagtctc cactgcacgt gccatgtggg aaacatgtcc aggatgccca
     1081 gccaaaggca tcttgcactg ggccgaggga gagggtccca ataccttgca gaattcagag
     1141 catagagaaa gtgggggttg ggatgcaaga tttggagtcc ggcacctgct gccttcaagg
     1201 aatagttgtt aatatccaat ggctacttaa tgtagacaga tttccactgg cgttgtgtga
     1261 tgtcattata aaatacatag cactcagcat cacggggagg aactaaggtc atttgctaag
     1321 atgtgtgtct tgaaaggagg aagccaagag aacaggatgc taatagtatg agtacattat
     1381 caaaagttgc ctttgtttat cctctctgga aagttccttg gtgctatatg gttttgaatg
     1441 acattcactt cagtattcat tacgtctgtt cattttcgtg gaactttgac cttgggtaaa
     1501 ttggctgcca ttcacttctg attatttatg ttgtgtgagc cctgcgtgaa ctccttccct
     1561 tggctcgctc ccactacaca gtaaccctca ctggacactg gctccttacc tctctcacct
     1621 tttatatcgt ccaccagctt atatatgaat atttttaaag caccaaatat tgaacaagca
     1681 ctcaagttga gctttatatt ggtcacattt tatggatttt tcacagataa catttattta
     1741 aaatttatct ttgtacttca tttcatatga atatgggtgt aattgtaaac taatctccat
     1801 tcctatgtgt acattaatgg ccaattagat tgactttgct tttggaaatt ctgtatataa
     1861 acaacaagag cagtttttgc tgtgtgccat tgtttgatga tcctgagtgt atttcatgcc
     1921 tgtctgcaca gtccagtttg ggtctaactt tattttgaac aactgtgtgc tgtcattaat
     1981 aaagagaagc gaggaagatt ggaaacttgt gaagcagcta gagatgctaa agtgaggttc
     2041 ttggggatag taatctacct tactccgagc cattcctttc tccattaaag cagagagact
     2101 tcaagtaaaa tcttgttttt caaataagtt taataaatat gaagttataa ctgtctctct
     2161 ttttatattt ctctcttgac ccactgaacc taaattgatt gtcttttccg attattgtta
     2221 aactatctcc cacctaacta taatgtctgc atggaactct aaacaaagtt tttacagtca
     2281 tttagaaatt gctgaggttt taaagatttg ctttcacttg aagatgttgg aaaccatgtt
     2341 ccagactgta gttaccacgc ctgtgtgtgc cttctgaatc cactctcagc tgctggtttt
     2401 taacacgcca gtgatttcag tggaaagtcc tatagcctga gtttataaga agacaaaaga
     2461 agagcaggaa ctctctgggg cccgttgatc tgcttatgag agagaagacc cagccttcgc
     2521 agtttttctt tgtgcagtcc gatatgaact gtacatgtgg agccctgcca ggctctcctt
     2581 acactttgcc cagctccttt attaccgaac tactgggatg ttcccctctc tctaagggag
     2641 aggttcccac acggccccag tgacctaatt tttattgtag agcagagtct gtctatggag
     2701 actagctatt ttctgcaaga aggaacagtc tgtaaattta acatacatga actctggaag
     2761 gactttcttt cttccttcct tccttccttc cttccttcct tccttccttc ctttctttct
     2821 ttctttctct ctttctctct ttctttcttt ctttctttct ctctttcttt ctctcttttt
     2881 ttagaaccaa tatgaaaata aataactttc tgtgtctgcg taattttctt ttgagacaca
     2941 gtctcactat atagccccag atgacttggt actcactata tagaccaggc tggtctcaaa
     3001 ctcacaggca tatcctcctg tctccgcctc ctgagagctg atattaaagt catgtgcccc
     3061 aacaccaggg tagaacactt ttgtcctaag taatcctggt gatgagtctg tgctaactat
     3121 tctatcctgc ttgcttctat tagactgttg ctccagcctg tcctgtcctg tcctgtcctg
     3181 tcctgtcctg cccaagacat gaatcataag ctccatgaag agttctggaa agtcatccag
     3241 gcctgcaaca cagacctcgg gggaaggcat cagttgcctg gaacctagga tagaaaaaag
     3301 aactgactcc tgcaaattgt acacacacac acatataaca cacacacaca cacacatcac
     3361 acacacacag ggagggtgat ttaaatatag actctgaata tgagaaaaag catgtgttgt
     3421 ttgtcttgct gactctggct tatttggatt ttgtttgttg tttgtttttc acagagtctc
     3481 attatgtggc cctgaatgtc ctcaaactca ctatgtagac caggctggcc ttaaattcac
     3541 aaagatttgc ctgtttctgc tttctgagtt ctggcctgag tctagtttat ttcatttagc
     3601 ataccaattt cttctgtcat ccattttcct aaaaaaaatt gaaacaaaat ttaaaaaatt
     3661 aaaaaagtca tgattttctt tttcttcatg actgaataaa atcccactgt gtgtagtgcc
     3721 acattttctt tatgtttgtc tattggtgga catctaggct ggatattttt ctggctattg
     3781 tgaacggtaa agcaacaaac acagacattc aagtatcgct gttcacttag agtgtgtgcc
     3841 ccgcggtggt ttaggtgggg gcaatggttg atcttggctg ttgacctcac tggatccaga
     3901 actaataaaa ataagacaag c
//
