LOCUS       NM_028961               1772 bp    mRNA    linear   ROD 07-AUG-2024
DEFINITION  Mus musculus sperm tail PG rich repeat containing 3 (Stpg3),
            transcript variant 1, mRNA.
ACCESSION   NM_028961 XM_130141 XM_922687
VERSION     NM_028961.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1772)
  AUTHORS   Park,S., Shimada,K., Fujihara,Y., Xu,Z., Shimada,K., Larasati,T.,
            Pratiwi,P., Matzuk,R.M., Devlin,D.J., Yu,Z., Garcia,T.X.,
            Matzuk,M.M. and Ikawa,M.
  TITLE     CRISPR/Cas9-mediated genome-edited mice reveal 10 testis-enriched
            genes are dispensable for male fecundity
  JOURNAL   Biol Reprod 103 (2), 195-204 (2020)
   PUBMED   32561905
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL732309.9.
            
            On Jan 7, 2022 this sequence version replaced NM_028961.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC138006.1, AK029738.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-126               AL732309.9         107127-107252       c
            127-287             AL732309.9         106868-107028       c
            288-422             AL732309.9         106640-106774       c
            423-511             AL732309.9         106463-106551       c
            512-806             AL732309.9         105921-106215       c
            807-1772            AL732309.9         104839-105804       c
FEATURES             Location/Qualifiers
     source          1..1772
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 17.07 cM"
     gene            1..1772
                     /gene="Stpg3"
                     /gene_synonym="4933433C11Rik"
                     /note="sperm tail PG rich repeat containing 3"
                     /db_xref="GeneID:74472"
                     /db_xref="MGI:MGI:1921722"
     exon            1..126
                     /gene="Stpg3"
                     /gene_synonym="4933433C11Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             20..940
                     /gene="Stpg3"
                     /gene_synonym="4933433C11Rik"
                     /note="sperm-tail PG-rich repeat-containing protein 3"
                     /codon_start=1
                     /product="protein STPG3"
                     /protein_id="NP_083237.1"
                     /db_xref="CCDS:CCDS50525.1"
                     /db_xref="GeneID:74472"
                     /db_xref="MGI:MGI:1921722"
                     /translation="MNFDQKAVKFLANFYINGGKHWTRGPLSQKPLHPTQPSAAAVLW
                     WDQELETAWDEMWHPKMKRSSSGFRLRIGAPNESTPISTGTLRELWLERRPPILMDLD
                     VPGPAQYEVPNMSLREASPHPQYTIGRKYPVREGGGRRAWQTMWLQSESPFMQKTDFN
                     RETKWPSPAEYTPLSQPAFPAFSFGDRHRSVVKMPESRFRPGMLRARGPCSYTPLLPT
                     SKPSGEKRPSPNTYNILPGYRLQSTRSPAFSMSRSPAFASWVSSSGTPGPAAYYVEDC
                     YNSRFPSSPGVVIQGVRRPKRHDTGPFCTL"
     exon            127..287
                     /gene="Stpg3"
                     /gene_synonym="4933433C11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            288..422
                     /gene="Stpg3"
                     /gene_synonym="4933433C11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            423..511
                     /gene="Stpg3"
                     /gene_synonym="4933433C11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            512..806
                     /gene="Stpg3"
                     /gene_synonym="4933433C11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            807..1772
                     /gene="Stpg3"
                     /gene_synonym="4933433C11Rik"
                     /inference="alignment:Splign:2.1.0"
     polyA_site      1138
                     /gene="Stpg3"
                     /gene_synonym="4933433C11Rik"
                     /note="major polyA site"
     polyA_site      1218
                     /gene="Stpg3"
                     /gene_synonym="4933433C11Rik"
                     /note="major polyA site"
     regulatory      1749..1754
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Stpg3"
                     /gene_synonym="4933433C11Rik"
                     /note="hexamer: ACTAAA"
     polyA_site      1772
                     /gene="Stpg3"
                     /gene_synonym="4933433C11Rik"
                     /note="major polyA site"
ORIGIN      
        1 aaggagccca agccccagaa tgaactttga tcagaaggct gtgaaattcc tggcaaattt
       61 ttacatcaat ggaggcaaac actggactcg gggccccctg agtcagaaac ctcttcatcc
      121 cacccagccc agtgctgctg ctgtgttatg gtgggaccag gagctggaga ctgcctggga
      181 tgagatgtgg cacccaaaga tgaagagatc ctcaagtggc ttcaggttaa gaataggcgc
      241 ccccaatgag tccacaccta tcagcacagg gactctgaga gagctgtggc tcgagagacg
      301 tcctccaatc ctgatggacc tggatgtccc tggcccagcc cagtacgagg tgcccaatat
      361 gtctctgcga gaggcctctc cacaccccca atacaccatc ggtcgcaagt acccggttcg
      421 agagggtggt ggccgcaggg catggcagac catgtggctc caaagtgaaa gccccttcat
      481 gcagaagacc gacttcaacc gagagacaaa gtggccatca cccgccgagt acacgccgct
      541 gagccagcct gccttcccgg ccttcagctt tggagaccgc catcgctctg ttgtcaaaat
      601 gccggagagt cgcttccgcc cagggatgct ccgagcccga ggtccttgta gctatacccc
      661 actcttgcct acctcaaagc cctctggcga gaagcgaccc agccccaaca cctataacat
      721 ccttcctggg taccgtctgc agagcacacg ctcacctgcc ttctccatga gccggtctcc
      781 tgcgtttgca tcctgggtca gctcctccgg aaccccaggt ccagctgcct actacgtgga
      841 agactgctac aactcacgct tcccatcttc gcctggagta gttattcaag gagtgcgcag
      901 acccaagcgc cacgacacag gccctttctg cacactatag gcccatcggg tataggttgc
      961 aaagctgacc tctcttgagg cttaccaagg cttcctttgg aactctttgt ctatagccgg
     1021 ctttctgatc ctctagacac ccctcaccca ctcttctggc ttaggctgtc caacaagaag
     1081 agtcttccca gagtcccctt tcaccccact ataccaagat gcaaatgatt cttctgaact
     1141 gtggtctctg gtgtgcctgg ttgcccatcc tttgcccaat gggctgtctt gaatatgtgg
     1201 ctttctgctt ccctggtatt tctggctttc tctgttcctg cgtggtgttc ttttcttcag
     1261 gattgaaatg gcagtctggg aactaaccct aagctttctg acctaggata gaataggaaa
     1321 aggcaatgtg ggacaatcta atccactcac ctaaggtcca gcatctacct gaggatcagg
     1381 gatgcttgct gggctgagga actattggga tgggatggga agtcagaacc tggggtgcag
     1441 acacctgtct gcagacagcc ttgcctagcc cactgaggta ggacccaggg aatcagctca
     1501 ccagacactg gccctactcc cctggagcct tgacctgaag agtcaactgg gtttggtaac
     1561 ttgtgttctg agaacccacg cccaaagcct tcccacccta gcccctgccc aatgatggtt
     1621 ccctcagcac tgttgatctg ccttcctact tagaagtagc ccccttcagg agccttgccc
     1681 tgcagctagt aatagcaatt tctccagagc tctctccata ctttcttcca cacccagaca
     1741 cagatctcac taaagaacgt ttttaaaatg ta
//
