LOCUS       NM_029858               2983 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Mus musculus stonin 1 (Ston1), mRNA.
ACCESSION   NM_029858
VERSION     NM_029858.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2983)
  AUTHORS   Feutlinske,F., Browarski,M., Ku,M.C., Trnka,P., Waiczies,S.,
            Niendorf,T., Stallcup,W.B., Glass,R., Krause,E. and Maritzen,T.
  TITLE     Stonin1 mediates endocytosis of the proteoglycan NG2 and regulates
            focal adhesion dynamics and cell motility
  JOURNAL   Nat Commun 6, 8535 (2015)
   PUBMED   26437238
  REMARK    GeneRIF: Data establish Stonin1 as a specific adaptor for the
            endocytosis of NG2 and as an important factor for focal adhesion
            dynamics and cell migration.
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2983)
  AUTHORS   Yokoyama,S., Ito,Y., Ueno-Kudoh,H., Shimizu,H., Uchibe,K.,
            Albini,S., Mitsuoka,K., Miyaki,S., Kiso,M., Nagai,A., Hikata,T.,
            Osada,T., Fukuda,N., Yamashita,S., Harada,D., Mezzano,V., Kasai,M.,
            Puri,P.L., Hayashizaki,Y., Okado,H., Hashimoto,M. and Asahara,H.
  TITLE     A systems approach reveals that the myogenesis genome network is
            regulated by the transcriptional repressor RP58
  JOURNAL   Dev Cell 17 (6), 836-848 (2009)
   PUBMED   20059953
REFERENCE   3  (bases 1 to 2983)
  AUTHORS   Walther,K., Diril,M.K., Jung,N. and Haucke,V.
  TITLE     Functional dissection of the interactions of stonin 2 with the
            adaptor complex AP-2 and synaptotagmin
  JOURNAL   Proc Natl Acad Sci U S A 101 (4), 964-969 (2004)
   PUBMED   14726597
REFERENCE   4  (bases 1 to 2983)
  AUTHORS   Walther,K., Krauss,M., Diril,M.K., Lemke,S., Ricotta,D., Honing,S.,
            Kaiser,S. and Haucke,V.
  TITLE     Human stoned B interacts with AP-2 and synaptotagmin and
            facilitates clathrin-coated vesicle uncoating
  JOURNAL   EMBO Rep 2 (7), 634-640 (2001)
   PUBMED   11454741
  REMARK    Erratum:[EMBO Rep 2002 Feb;3(2):197]
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY334339.1, AK014958.1, CF729405.1 and CD349605.1.
            
            On Nov 2, 2007 this sequence version replaced NM_029858.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK014958.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-66                BY334339.1         2-67
            67-2163             AK014958.1         2-2098
            2164-2544           CF729405.1         368-748
            2545-2847           AK014958.1         2480-2782
            2848-2983           CD349605.1         200-335
FEATURES             Location/Qualifiers
     source          1..2983
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="17"
                     /map="17 58.1 cM"
     gene            1..2983
                     /gene="Ston1"
                     /gene_synonym="4921524J06Rik; Salf; Sblf"
                     /note="stonin 1"
                     /db_xref="GeneID:77057"
                     /db_xref="MGI:MGI:1924307"
     exon            1..308
                     /gene="Ston1"
                     /gene_synonym="4921524J06Rik; Salf; Sblf"
                     /inference="alignment:Splign:2.1.0"
     exon            309..2270
                     /gene="Ston1"
                     /gene_synonym="4921524J06Rik; Salf; Sblf"
                     /inference="alignment:Splign:2.1.0"
     CDS             356..2548
                     /gene="Ston1"
                     /gene_synonym="4921524J06Rik; Salf; Sblf"
                     /note="stoned B/TFIIA-alpha/beta-like factor; stoned
                     B-like factor"
                     /codon_start=1
                     /product="stonin-1"
                     /protein_id="NP_084134.2"
                     /db_xref="CCDS:CCDS50207.1"
                     /db_xref="GeneID:77057"
                     /db_xref="MGI:MGI:1924307"
                     /translation="MYSTNPGSWVTFDDDPAFQSSQKRKDFSLETQGVCRPNGLKLTL
                     PTLRDPPSTPSSASSTPLSSPMVDFYFSPGPPSNSPLSTPTKDFPGFPGIPKAGTHVL
                     YPIPECSSSSAPTTAGGVGPPLLLTKPDCSPHVSLPSSHSHTQPTPTLGFTEDAGPQR
                     VQSEARQFEYFQDHCAFSNPFWKDEGSASPFPLDSLASRKPFSPKDKEVPIGHKSLTQ
                     CSLDYICEKLEHLHSAETQDPLGDLSMQDPYAGDTVSFVPHSLFRSQPRAGWSFMLRI
                     PEKKNMMSSRQWGPIFLKVLPGGILQMYYEKGLEKPFKEFQLDPHCRLSEPKLENFSM
                     AGKIHTVKVEHVSYSEKRKYHAKTEVVHEPEVEQMLKLGSTEHRDFLEFLTTVEEELI
                     KLPATAKPKNKSYEEQEICLDIQDSLWGKVTKEGQLVESAVVTQICCLCFLNGPAECF
                     LALNDRELQKRDECYFEKEPEKKGIAILDYHFHTCVKAEEFEQSRIIKFVPLDACRFE
                     LMRFKTSYEAGELPFAVKSVVTVQGAYVELQAFVNMTPAAQGSPHAGALRSCNNIMIH
                     FPVPAQWIKALWTRNLQRQKSLKAKMNRRACLGSLQEPESEPVIQVTVGSAKYESAYR
                     AVVWKIDRLPDKNSSPDQPHCLSYKLELGSDQEVPSDWYPFATVQFSMLEACASRTEV
                     RSLGVESDAQPQKHVCQRACYNIQVEIEKKWIQVDGEDADKTGGCVTQ"
     exon            2271..2473
                     /gene="Ston1"
                     /gene_synonym="4921524J06Rik; Salf; Sblf"
                     /inference="alignment:Splign:2.1.0"
     exon            2474..2983
                     /gene="Ston1"
                     /gene_synonym="4921524J06Rik; Salf; Sblf"
                     /inference="alignment:Splign:2.1.0"
     polyA_site      2848
                     /gene="Ston1"
                     /gene_synonym="4921524J06Rik; Salf; Sblf"
                     /note="major polyA site"
ORIGIN      
        1 attgttacag agcaaaaagc cagagtcaga gaagttcagc cttggtaaga gcccagaggc
       61 tgaagcggga gtctgcctga ccatgacaat ggggtacagc tgatagcttc cagggatgga
      121 cggcttcagc gtctgtcctc ccccaacatc tggaatgtat ggaggagtat acattaggga
      181 ccatgtaaaa ggagtctgtt cctctccaca caccggcagt gacgtggaga caaagccaca
      241 aatgatccgg aatgtggctt taccagctga aggcccccga gtcggatttc aacaatcttc
      301 aggagatgag acaacgaccc tgactatttg accagaccac aagcccaccc tgaagatgta
      361 ttctacaaac ccgggcagct gggtcacctt tgatgatgac cctgcttttc aatcttctca
      421 gaaaagaaag gatttttctc tggagactca gggtgtttgt agaccaaacg gactgaagct
      481 gacccttcct accctccggg accctcccag caccccctcc tctgccagca gcacccccct
      541 gtcctctccc atggtggatt tttatttcag tccaggaccc ccaagcaact cccctctttc
      601 tacacccacc aaagacttcc cagggttccc tggcatccct aaagcaggga cacatgtgct
      661 ttatcctatt ccagagtgtt cttcaagcag tgcccccaca acggcgggag gagtgggtcc
      721 cccattatta cttactaagc cagactgctc cccccatgta tcgttaccca gtagccactc
      781 ccacactcag cccactccaa cactcggttt tacagaagac gctggccctc agcgggtcca
      841 aagcgaggct cggcagttcg aatattttca ggaccattgt gctttctcca acccattttg
      901 gaaagatgaa ggtagcgctt ccccgttccc ccttgactcc ctggcaagca gaaagccgtt
      961 ctcaccaaag gacaaggagg tacctattgg ccacaaaagc ctaacccagt gctcactgga
     1021 ctacatctgc gagaagctgg aacacttgca ctcagcggag acccaagacc ctcttggaga
     1081 tttgtctatg caggatccat atgcaggaga cacagtctcg tttgtcccac actccctctt
     1141 ccggagtcag cccagagctg gatggtcctt catgctgagg attcccgaga agaagaacat
     1201 gatgtcttcc cggcaatggg gacccatttt cctaaaggtt cttcctggag ggattctgca
     1261 gatgtactat gagaaggggc tagaaaaacc attcaaagag ttccagcttg acccacattg
     1321 caggctttct gagcccaaac tcgagaactt cagcatggca gggaaaatcc acaccgtgaa
     1381 ggtggaacac gtgtcttact cagagaaaag gaaataccat gccaagacag aggtggttca
     1441 cgagccggaa gtggagcaga tgctgaagct ggggtccacg gaacaccgtg acttcctcga
     1501 gtttctgact accgtcgaag aggagctaat aaagctgccg gctactgcca agcccaagaa
     1561 caaaagctac gaggaacaag aaatttgcct ggacattcag gacagccttt ggggtaaagt
     1621 aaccaaagag gggcagctgg tggaaagcgc cgtggtaact cagatctgct gcctctgctt
     1681 tctcaacggg cccgcggaat gtttcttagc cttaaacgac cgtgagctcc agaaacggga
     1741 cgaatgctat tttgagaaag aaccggaaaa aaaggggatt gctattcttg actaccattt
     1801 ccatacgtgt gtgaaggctg aagaatttga acagtccaga atcattaagt tcgtgcctct
     1861 ggatgcttgc cggtttgagc tgatgcgttt caaaacctcg tacgaagcgg gtgagctccc
     1921 ctttgcggtg aagtccgtag taactgtcca gggagcctat gtggagctgc aggcctttgt
     1981 caacatgacc ccagcagctc aggggtcacc ccatgccggt gccctgagga gctgtaacaa
     2041 tatcatgatt cattttcctg tcccagccca gtggatcaag gccctctgga ccaggaacct
     2101 tcagaggcag aagtccctga aagccaaaat gaaccgtcgg gcttgtctgg ggagtttaca
     2161 ggagcctgaa tctgaacctg tcattcaggt cactgtcggg tcagcaaaat atgagagcgc
     2221 ctaccgggct gtggtgtgga agatagaccg gcttccggat aaaaactcaa gtcctgatca
     2281 gccccattgt ctgtcataca aactagaact tgggtcagac caggaagttc cctcagattg
     2341 gtatccattt gctactgtcc agttttccat gcttgaagcc tgtgcctcaa ggacagaggt
     2401 gaggtctctg ggagtggaga gcgatgccca gcctcagaag cacgtgtgtc agcgagcttg
     2461 ctacaacatc caggttgaaa tagaaaagaa gtggattcaa gtagatggag aagacgcaga
     2521 taaaactggt ggctgtgtaa ctcaataaac acaaccccac ggttcaaaca cagaacctac
     2581 ccacagggca ggaagttctg ctactgtatg gtgggactga gaagcggcct taggccagag
     2641 atccagtggc gagtcccaaa gcaggccatc tgcgtgccac tcttctgatg ctctgcaatg
     2701 tgtccatgag tcgtaccatg agttacatca tgttgaaact tggaggcgct gctatctgat
     2761 gcaagacctg ctggccagtt tgactgaagg gtatctgggt ttggattcct cagcgacttt
     2821 gttttataat ctgggttttg tgattccaca tcgcttcttg ctttctgtgt ggaacggttc
     2881 gaatggatga gaagagttag gaggtacgac tttgttggag gaagtgtgtc actgggggtg
     2941 ggctttgagg ttgtaaaaac ccaagcttgg cctagtccct ccc
//
