LOCUS       NM_013515               2816 bp    mRNA    linear   ROD 02-MAY-2024
DEFINITION  Mus musculus stomatin (Stom), mRNA.
ACCESSION   NM_013515
VERSION     NM_013515.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2816)
  AUTHORS   Zhu,Z., Guo,Z., Gao,X., Chen,Y., Huang,J., Li,L. and Sun,B.
  TITLE     Stomatin promotes neutrophil degranulation and vascular leakage in
            the early stage after severe burn via enhancement of the
            intracellular binding of neutrophil primary granules to F-actin
  JOURNAL   Burns 50 (3), 653-665 (2024)
   PUBMED   38185615
  REMARK    GeneRIF: Stomatin promotes neutrophil degranulation and vascular
            leakage in the early stage after severe burn via enhancement of the
            intracellular binding of neutrophil primary granules to F-actin.
REFERENCE   2  (bases 1 to 2816)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   3  (bases 1 to 2816)
  AUTHORS   Kim,J.H., Rhee,J.K., Ahn,D.G., Kim,K.P. and Oh,J.W.
  TITLE     Interaction of stomatin with hepatitis C virus RNA polymerase
            stabilizes the viral RNA replicase complexes on detergent-resistant
            membranes
  JOURNAL   J Microbiol Biotechnol 24 (12), 1744-1754 (2014)
   PUBMED   25262680
REFERENCE   4  (bases 1 to 2816)
  AUTHORS   Moshourab,R.A., Wetzel,C., Martinez-Salgado,C. and Lewin,G.R.
  TITLE     Stomatin-domain protein interactions with acid-sensing ion channels
            modulate nociceptor mechanosensitivity
  JOURNAL   J Physiol 591 (22), 5555-5574 (2013)
   PUBMED   23959680
REFERENCE   5  (bases 1 to 2816)
  AUTHORS   Wang,S.Z., Ou,J., Zhu,L.J. and Green,M.R.
  TITLE     Transcription factor ATF5 is required for terminal differentiation
            and survival of olfactory sensory neurons
  JOURNAL   Proc Natl Acad Sci U S A 109 (45), 18589-18594 (2012)
   PUBMED   23090999
REFERENCE   6  (bases 1 to 2816)
  AUTHORS   Gallagher,P.G., Turetsky,T. and Mentzer,W.C.
  TITLE     Genomic organization and 5'-flanking DNA sequence of the murine
            stomatin gene (Epb72)
  JOURNAL   Genomics 34 (3), 410-412 (1996)
   PUBMED   8786142
REFERENCE   7  (bases 1 to 2816)
  AUTHORS   Gallagher,P.G., Romana,M., Lieman,J.H. and Ward,D.C.
  TITLE     cDNA structure, tissue-specific expression, and chromosomal
            localization of the murine band 7.2b gene
  JOURNAL   Blood 86 (1), 359-365 (1995)
   PUBMED   7540886
REFERENCE   8  (bases 1 to 2816)
  AUTHORS   Pilz,A., Woodward,K., Povey,S. and Abbott,C.
  TITLE     Comparative mapping of 50 human chromosome 9 loci in the laboratory
            mouse
  JOURNAL   Genomics 25 (1), 139-149 (1995)
   PUBMED   7774911
REFERENCE   9  (bases 1 to 2816)
  AUTHORS   Pilz,A., Prohaska,R., Peters,J. and Abbott,C.
  TITLE     Genetic linkage analysis of the Ak1, Col5a1, Epb7.2, Fpgs, Grp78,
            Pbx3, and Notch1 genes in the region of mouse chromosome 2
            homologous to human chromosome 9q
  JOURNAL   Genomics 21 (1), 104-109 (1994)
   PUBMED   8088777
REFERENCE   10 (bases 1 to 2816)
  AUTHORS   Rowe,L.B., Nadeau,J.H., Turner,R., Frankel,W.N., Letts,V.A.,
            Eppig,J.T., Ko,M.S., Thurston,S.J. and Birkenmeier,E.H.
  TITLE     Maps from two interspecific backcross DNA panels available as a
            community genetic mapping resource
  JOURNAL   Mamm Genome 5 (5), 253-274 (1994)
   PUBMED   8075499
  REMARK    Erratum:[Mamm Genome 1994 Jul;5(7):463]
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AL773523.4.
            
            On Nov 17, 2006 this sequence version replaced NM_013515.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: U17297.1, AK139242.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164134, SAMN01164135
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-151               AL773523.4         180936-181086       c
            152-255             AL773523.4         170498-170601       c
            256-328             AL773523.4         169391-169463       c
            329-411             AL773523.4         167741-167823       c
            412-615             AL773523.4         165560-165763       c
            616-750             AL773523.4         164408-164542       c
            751-2816            AL773523.4         158067-160132       c
FEATURES             Location/Qualifiers
     source          1..2816
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 23.53 cM"
     gene            1..2816
                     /gene="Stom"
                     /gene_synonym="Epb7.2"
                     /note="stomatin"
                     /db_xref="GeneID:13830"
                     /db_xref="MGI:MGI:95403"
     exon            1..151
                     /gene="Stom"
                     /gene_synonym="Epb7.2"
                     /inference="alignment:Splign:2.1.0"
     exon            152..255
                     /gene="Stom"
                     /gene_synonym="Epb7.2"
                     /inference="alignment:Splign:2.1.0"
     exon            256..328
                     /gene="Stom"
                     /gene_synonym="Epb7.2"
                     /inference="alignment:Splign:2.1.0"
     exon            329..411
                     /gene="Stom"
                     /gene_synonym="Epb7.2"
                     /inference="alignment:Splign:2.1.0"
     exon            412..615
                     /gene="Stom"
                     /gene_synonym="Epb7.2"
                     /inference="alignment:Splign:2.1.0"
     exon            616..750
                     /gene="Stom"
                     /gene_synonym="Epb7.2"
                     /inference="alignment:Splign:2.1.0"
     exon            751..2816
                     /gene="Stom"
                     /gene_synonym="Epb7.2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agagcttgag ccccttcgtt gctaacggct ctcagtaaag ctccggcttt gggaactgac
       61 gagtttttga gcgactctga ctccagcact atgtctgaca aacggcagtc cagccatgtc
      121 cagtctcagc ggatccctga gtccttcaga gaaaattcca agacagaact gggagcttgt
      181 ggatggattt tggtggctgc ctcgttcttt ttcgtaatta taaccttccc aatatcaata
      241 tggatttgca taaagattgt aaaagagtat gagagagtca tcatctttag actgggtcgc
      301 attttgcaag gaggcgccaa aggaccaggt ttgtttttta tcctgccgtg cactgacagc
      361 ctcatcaagg tggacatgag gaccatctcc tttgacattc ctccgcagga ggtcctcact
      421 aaggactcgg tgacaatcag tgtggatggt gtggtctact accgtgttca gaacgcaacc
      481 ctggctgtgg ccaatatcac caatgcagat tcagcaaccc gtcttttggc acaaactacc
      541 ctcaggaatg cgctgggcac caagaacctg tctcaaatcc tctctgacag agaagagatt
      601 gcacaccaca tgcagagtac gctggacgat gccacggatg actgggggat caaggtggag
      661 cgggtggaga ttaaggacgt gaagctgcca gtgcagctcc agagagccat ggctgcagag
      721 gcagaagccg cccgggaggc tagggccaag gtgattgcag ctgaagggga aatgaatgcg
      781 tccagagctc tgaaagaagc gtccatggtt atcaccgagt ctcctgccgc ccttcagctt
      841 cgataccttc aaaccctgac cactatcgct gcagagaaaa actccaccat tgtcttccct
      901 ctgcccgtcg acatgttgca gggcatcatg ggttctaatc actgagctgt ccaggtctat
      961 ggagagctgt gctgaatcct tcccagggta aagtggggac aaagttagcc tttaactcac
     1021 agggagatta gccagaaact tgactgtccc cctccctctt ctttcctgta tgttcactag
     1081 aggggctttt agaatggata gaaatcataa aggcagatga gggactcact ctggagccag
     1141 gagtgtagct cagtagcaga ggacttgctt agcatgcctg gacttaatcc tcagcaccaa
     1201 aacagagaca tgttggcttg taaataacga gagaatgaga tggctggctt atgcacagtt
     1261 ctcttactct ttaagtttgc gtcttttttc ttaagtagtt gaggccaact tctgacttcc
     1321 tttaactcat tctgaaccat gaatgagcag gcaagtcagg gcaagggaca cagcctagac
     1381 atgccacctg agcccaggta gatgttccat gacactgaag aattgtgcca cccacttctc
     1441 tggccacctg tgcattcatt cccttgagag gatattttgg attgttttgt tttgttttgt
     1501 tttgagacag ggtttctctg agtggccttg gctgtcctgg ccttgctctc agagatcccc
     1561 ttgcctctac ccccgcccca cccgagtgcc accaccacca cctcgcctta aggaagggta
     1621 tttccccaaa gttcatccac ccagtctaag cccagagctt gtttgggagg gatcctctcc
     1681 ttcctcctgc ttgatcctgt aggagccaac agagaggccc acgctgaccc ttccgaggcc
     1741 gaaggtcact cctgccatag tccttttgaa aatagtaggt gcacttttaa aaaaaccttc
     1801 ttgggcctcc cctccctgac ttgatgaccc ctctgtgtgt ggcctttaaa gcagctaatt
     1861 cctgtcacag aagtgctctt tctcacttgt gcctattctc atggatcagg tttttacatc
     1921 atcttgattt ttaaaaataa cttggagttc tatcaataaa tttttatgtc catttgatta
     1981 gcttaagtac tgaagtacct ttaaattttt taaagaaagc atcatacttt gctctgtaca
     2041 tactattaac tgttgtatac tgtggtatgt tttaattact aaccctacct aagtagcata
     2101 aggaatccct aacacaagag cttgtgattg acctgtgcag acgcccctgc tgagccctcc
     2161 gtgcacaggg agaatgctta tgtttgattc attttgtggg gttttctttc tcatataaaa
     2221 ccagtagagg atcacagttc cttattgtga catccttccc ttggcctgga aagcttggtg
     2281 gtggcttttg caacagcttg aggggggggg gggattcttg actcagctgg aggagcctgg
     2341 aagaatggtt ccctgtcaca gtagtactgt tgacacctgc cctgagctgt tcactgccag
     2401 gcccacgtgg agcccatgac agacactctg tccctaagcc ttgagcccag cagggttttc
     2461 tagaggtgta tagagcactt ccacctggac tcaagttgca tttacatttt gagtttaaaa
     2521 agatgttttt ttttaatctg tttatagaag tagctcacct tccactgagg accaggaaac
     2581 cctgtgtcct ggtaaaacac cttggagaca ggaaacaatg cccctggttt tctaaatttc
     2641 ctgtccagac accaactggc ctttgcttct gtgccttgtg aattagtaat ccagtaggct
     2701 aaaactcagt cacagggagg ggaggagaag agcaagccta gaggaagggg tgctggtggg
     2761 agggtttcca cgcattcccc ccttcagctg tgtacaataa agtgcgtgcc ctgtga
//
