LOCUS       NM_009133               1136 bp    mRNA    linear   ROD 07-MAY-2024
DEFINITION  Mus musculus stathmin-like 3 (Stmn3), mRNA.
ACCESSION   NM_009133
VERSION     NM_009133.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1136)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 1136)
  AUTHORS   Bedogni,F. and Hevner,R.F.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 1136)
  AUTHORS   Kiyama,T., Chen,C.K., Wang,S.W., Pan,P., Ju,Z., Wang,J., Takada,S.,
            Klein,W.H. and Mao,C.A.
  TITLE     Essential roles of mitochondrial biogenesis regulator Nrf1 in
            retinal development and homeostasis
  JOURNAL   Mol Neurodegener 13 (1), 56 (2018)
   PUBMED   30333037
  REMARK    Publication Status: Online-Only
REFERENCE   4  (bases 1 to 1136)
  AUTHORS   Cui,W., Dai,X., Marcho,C., Han,Z., Zhang,K., Tremblay,K.D. and
            Mager,J.
  TITLE     Towards Functional Annotation of the Preimplantation Transcriptome:
            An RNAi Screen in Mammalian Embryos
  JOURNAL   Sci Rep 6, 37396 (2016)
   PUBMED   27869233
  REMARK    Publication Status: Online-Only
REFERENCE   5  (bases 1 to 1136)
  AUTHORS   Sone,K., Tsuda,M. and Mori,N.
  TITLE     Position-dependent effect of a neural-restrictive silencer-like
            element present in the promoter downstream of the SCG10-like
            protein gene
  JOURNAL   J Biochem 150 (4), 451-460 (2011)
   PUBMED   21705344
  REMARK    GeneRIF: The determined the genomic and promoter structures of the
            SCLIP gene, and found that the gene retained an NRS-like element
            that functioned as a negative regulator in non-neuronal cells.
REFERENCE   6  (bases 1 to 1136)
  AUTHORS   Ballif,B.A., Villen,J., Beausoleil,S.A., Schwartz,D. and Gygi,S.P.
  TITLE     Phosphoproteomic analysis of the developing mouse brain
  JOURNAL   Mol Cell Proteomics 3 (11), 1093-1101 (2004)
   PUBMED   15345747
REFERENCE   7  (bases 1 to 1136)
  AUTHORS   Ding,H., Schertzer,M., Wu,X., Gertsenstein,M., Selig,S.,
            Kammori,M., Pourvali,R., Poon,S., Vulto,I., Chavez,E., Tam,P.P.,
            Nagy,A. and Lansdorp,P.M.
  TITLE     Regulation of murine telomere length by Rtel: an essential gene
            encoding a helicase-like protein
  JOURNAL   Cell 117 (7), 873-886 (2004)
   PUBMED   15210109
REFERENCE   8  (bases 1 to 1136)
  AUTHORS   Charbaut,E., Curmi,P.A., Ozon,S., Lachkar,S., Redeker,V. and
            Sobel,A.
  TITLE     Stathmin family proteins display specific molecular and tubulin
            binding properties
  JOURNAL   J Biol Chem 276 (19), 16146-16154 (2001)
   PUBMED   11278715
REFERENCE   9  (bases 1 to 1136)
  AUTHORS   Matsuo,N., Kawamoto,S., Matsubara,K. and Okubo,K.
  TITLE     A novel SCG10-related gene uniquely expressed in the nervous system
  JOURNAL   Gene 215 (2), 477-481 (1998)
   PUBMED   9714847
REFERENCE   10 (bases 1 to 1136)
  AUTHORS   Ozon,S., Byk,T. and Sobel,A.
  TITLE     SCLIP: a novel SCG10-like protein of the stathmin family expressed
            in the nervous system
  JOURNAL   J Neurochem 70 (6), 2386-2396 (1998)
   PUBMED   9603203
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AK032737.1.
            
            On Apr 6, 2007 this sequence version replaced NM_009133.2.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK032737.1, BC057017.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164131, SAMN01164132
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1136              AK032737.1         2-1137
FEATURES             Location/Qualifiers
     source          1..1136
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 103.63 cM"
     gene            1..1136
                     /gene="Stmn3"
                     /gene_synonym="9330161A03Rik; Sclip"
                     /note="stathmin-like 3"
                     /db_xref="GeneID:20262"
                     /db_xref="MGI:MGI:1277137"
     exon            1..307
                     /gene="Stmn3"
                     /gene_synonym="9330161A03Rik; Sclip"
                     /inference="alignment:Splign:2.1.0"
     CDS             289..831
                     /gene="Stmn3"
                     /gene_synonym="9330161A03Rik; Sclip"
                     /note="SCG10-like protein; SCG10-related protein HiAT3;
                     hippocampus abundant transcript 3; Scgn10 like-protein"
                     /codon_start=1
                     /product="stathmin-3"
                     /protein_id="NP_033159.1"
                     /db_xref="CCDS:CCDS17207.1"
                     /db_xref="GeneID:20262"
                     /db_xref="MGI:MGI:1277137"
                     /translation="MASTVSAYKEKMKELSVLSLICSCFYSQPHPNTIYQYGDMEVKQ
                     LDKRASGQSFEVILKSPSDLSPESPVLSSPPKRKDASLEELQKRLEAAEERRKTQEAQ
                     VLKQLAERREHEREVLHKALEENNNFSRLAEEKLNYKMELSKEIREAHLAALRERLRE
                     KELHAAEVRRNKEQREEMSG"
     exon            308..403
                     /gene="Stmn3"
                     /gene_synonym="9330161A03Rik; Sclip"
                     /inference="alignment:Splign:2.1.0"
     exon            404..579
                     /gene="Stmn3"
                     /gene_synonym="9330161A03Rik; Sclip"
                     /inference="alignment:Splign:2.1.0"
     exon            580..771
                     /gene="Stmn3"
                     /gene_synonym="9330161A03Rik; Sclip"
                     /inference="alignment:Splign:2.1.0"
     exon            772..1136
                     /gene="Stmn3"
                     /gene_synonym="9330161A03Rik; Sclip"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agttgctgcc agcgtttgtt cgtccactgt ctgtcggatc tgtctctctc tccctcttct
       61 ctctccttct ccctccctcc cgcccttcct ctctcctttc ctctctttct tcctctcccc
      121 tccccttcct tccaccccca ctcctccatc catccctcgc tccctccccc tcttgccgcg
      181 cccgcccttc ctccctcccc tccacagcat tgcagcattc gcagactgca gctcccagac
      241 accgcccgca tccctccggc ctccgaagcc ccagccgccg ccagcaccat ggccagcacc
      301 gtatctgcct acaaggagaa gatgaaggag ttatctgtgc tgtcgctcat ttgctcctgc
      361 ttctactctc agcctcaccc gaacaccatc taccagtatg gagatatgga agtgaagcag
      421 ctggataagc gggcctctgg ccagagcttc gaggtcatcc tcaagtctcc ttctgaccta
      481 tctccagaga gccctgtgct ctcttctcct cccaagagga aggatgcttc cttggaagag
      541 ctgcagaagc ggctggaggc agctgaggag cggaggaaga ctcaggaggc tcaggtgctg
      601 aagcagctgg cagagcggcg tgagcatgaa cgggaggtgc tgcacaaggc gcttgaagaa
      661 aacaataact ttagccgcct ggcggaggag aagctcaact acaagatgga gctgagcaag
      721 gagatccgcg aggcgcactt ggcagcgctg cgcgagcggc tgcgcgagaa ggagctgcac
      781 gctgctgagg tgcgcaggaa caaggagcag cgggaggaaa tgtctggcta aggagtattg
      841 gacccagcgg cgacaagaac gttttcgggt tttgtttttg ttttcaattc tgtctagatg
      901 cgaattttgt gcctgctcct atctgctccc ctgtacccct cagcttcctg cttttttccc
      961 acactctgaa ctgtccagtc cttgtaacgt gtctgacctt gggctcttcc tgaaggagct
     1021 ccttaggcag gagatatggt cccctattca gacactaggc caggtgtggc tggggctctc
     1081 ttagtggccc tcttagtgga tgtgttggca accttaataa atctagtggc agtggc
//
