LOCUS       NM_029951               3340 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Mus musculus STING1 ER exit protein 1 (Steep1), mRNA.
ACCESSION   NM_029951 XM_895881 XM_921229
VERSION     NM_029951.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3340)
  AUTHORS   Verkerk,A.J.M.H., Zeidler,S., Breedveld,G., Overbeek,L., Huigh,D.,
            Koster,L., van der Linde,H., de Esch,C., Severijnen,L.A., de
            Vries,B.B.A., Swagemakers,S.M.A., Willemsen,R., Hoogeboom,A.J.M.,
            van der Spek,P.J. and Oostra,B.A.
  TITLE     CXorf56, a dendritic neuronal protein, identified as a new
            candidate gene for X-linked intellectual disability
  JOURNAL   Eur J Hum Genet 26 (4), 552-560 (2018)
   PUBMED   29374277
REFERENCE   2  (bases 1 to 3340)
  AUTHORS   Cox,B.J., Vollmer,M., Tamplin,O., Lu,M., Biechele,S.,
            Gertsenstein,M., van Campenhout,C., Floss,T., Kuhn,R., Wurst,W.,
            Lickert,H. and Rossant,J.
  TITLE     Phenotypic annotation of the mouse X chromosome
  JOURNAL   Genome Res 20 (8), 1154-1164 (2010)
   PUBMED   20548051
REFERENCE   3  (bases 1 to 3340)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BB622061.1, AK035825.1, AK036910.1 and D18428.1.
            
            On or before Jan 25, 2008 this sequence version replaced
            XM_921229.3, XM_895881.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK035825.1, AK141615.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849375, SAMN00849380
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-601               BB622061.1         2-602
            602-1301            AK035825.1         591-1290
            1302-3050           AK036910.1         1223-2971
            3051-3333           AK036910.1         2973-3255
            3334-3340           D18428.1           216-222
FEATURES             Location/Qualifiers
     source          1..3340
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 21.23 cM"
     gene            1..3340
                     /gene="Steep1"
                     /gene_synonym="C330007P06Rik; STEEP"
                     /note="STING1 ER exit protein 1"
                     /db_xref="GeneID:77644"
                     /db_xref="MGI:MGI:1924894"
     exon            1..238
                     /gene="Steep1"
                     /gene_synonym="C330007P06Rik; STEEP"
                     /inference="alignment:Splign:2.1.0"
     CDS             115..783
                     /gene="Steep1"
                     /gene_synonym="C330007P06Rik; STEEP"
                     /note="UPF0428 protein CXorf56 homolog"
                     /codon_start=1
                     /product="STING ER exit protein"
                     /protein_id="NP_084227.1"
                     /db_xref="CCDS:CCDS53050.1"
                     /db_xref="GeneID:77644"
                     /db_xref="MGI:MGI:1924894"
                     /translation="MPKVVSRSVVCSDTRDREEYDDGEKPLHVYYCLCGQMVLVLDCQ
                     LEKLPMRPRDRSRVIDAAKHAHKFCNTEDEETTYLRRPEGIERQYRKKCAKCGLPLFY
                     QSQPKNAPVTFIVDGAVVKFGQGFGKTNIYTQKQEPPKKVMMTKRTKDMGKFSSVTVS
                     TIDEEEEEIEAREVADSYAQNAKVIEKQLERKGMSKRRLQELAELEAKKAKMKGTLID
                     NQFK"
     exon            239..356
                     /gene="Steep1"
                     /gene_synonym="C330007P06Rik; STEEP"
                     /inference="alignment:Splign:2.1.0"
     exon            357..398
                     /gene="Steep1"
                     /gene_synonym="C330007P06Rik; STEEP"
                     /inference="alignment:Splign:2.1.0"
     exon            399..537
                     /gene="Steep1"
                     /gene_synonym="C330007P06Rik; STEEP"
                     /inference="alignment:Splign:2.1.0"
     exon            538..627
                     /gene="Steep1"
                     /gene_synonym="C330007P06Rik; STEEP"
                     /inference="alignment:Splign:2.1.0"
     exon            628..720
                     /gene="Steep1"
                     /gene_synonym="C330007P06Rik; STEEP"
                     /inference="alignment:Splign:2.1.0"
     exon            721..3340
                     /gene="Steep1"
                     /gene_synonym="C330007P06Rik; STEEP"
                     /inference="alignment:Splign:2.1.0"
     regulatory      3313..3318
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Steep1"
                     /gene_synonym="C330007P06Rik; STEEP"
                     /note="hexamer: AATAAA"
     polyA_site      3340
                     /gene="Steep1"
                     /gene_synonym="C330007P06Rik; STEEP"
                     /note="major polyA site"
ORIGIN      
        1 aatccggtgt caacacgtga tcaagtggag aaacggtctg gcgcgagtgt ctgtgacgcc
       61 atctcggcgc gactcttcat tttctgggag ttttctggct gctctgccgg agctatgccg
      121 aaagtcgtgt cgcggtcggt ggtctgctca gacacccggg accgcgagga atatgatgat
      181 ggcgagaagc ccctccatgt ctactactgt ttatgtggcc agatggtcct ggtgctggat
      241 tgccagttag agaaattgcc catgaggccc cgggaccggt ctcgcgtgat cgatgctgcc
      301 aaacatgctc acaagttttg taacacagaa gatgaggaga ctacttatct tcggaggcct
      361 gagggcattg aacgtcagta caggaagaag tgtgcaaagt gtggactgcc gctcttctac
      421 caatcccagc cgaagaatgc tcctgtgacc ttcattgtgg atggagcagt agtgaaattt
      481 ggccaaggct ttgggaaaac caatatatat actcagaaac aagagcctcc taagaaggtt
      541 atgatgacca aaaggactaa agacatgggc aagttcagct ctgttactgt gtctaccatt
      601 gatgaagaag aagaggagat agaggctagg gaagttgctg actcttacgc gcagaatgcc
      661 aaagtgattg aaaagcagct ggagcgcaaa ggcatgagca agaggaggct gcaggagttg
      721 gctgaattgg aagccaagaa agcaaaaatg aaggggaccc tgatcgacaa tcagttcaaa
      781 taatcaagat ctttctgggt tcagactgga ggcagcagtt agatgaggaa gagtagcttc
      841 aagatgtgtt ttcgtttctg tttctcccag aagggttttc tgaccatcct attggttttc
      901 tgacactttt tcttttcttc cattgaagtc cttgactcca tttcacttgc tttctaggag
      961 gtagattgtt tgtaaaatct ctgtatatat gttttctgtc tttcttgtct ttgagatcag
     1021 gtcttgttac ataccagagt atggccttga actttgtgag cctcctctcc tgtcttagtc
     1081 tctctctctc tctctctctc tctctctctc tctctctgct gaagttccag gaccacacca
     1141 ccacacctgg cttctgtagc agtcctcttt tcttttgacg tatacttctt ttgcaatgta
     1201 gctagtacta gtaagcattt gactttctct agtgtctgac atagatgtct tttcttcttc
     1261 aaagttattg cagtttttaa aggttttttt tgttgttttt ttttttaaat atggtatgag
     1321 aggaaggtga ccaaaattaa gtttaaaata cagccaggta gatcctttta agaaacactg
     1381 tctctgatct ttgaactgtt cttagaattg actatggtct atggtttgaa tctttctcct
     1441 atcagtagag atcagttaga aacaccaaac ctgcagaaat acttccttac tcaaaatctt
     1501 agaattctag gtgaaccatg ctatgtcaga cttcagaata aaagaaggaa aagccatgtg
     1561 gctgggggtg tagctcagta gtggaatgca tgctaggcat gtgtgaggac agccccagca
     1621 ccaaaacaaa aaacaaacaa acaggaaagc cagatcacag atgcagggct aggatggctc
     1681 aggtcggatt taaatatggc cttgctaagt aacccaaagg agttagtcag tcagctggga
     1741 gaatactcta tgagtacaca gaagggggca tagtgagagg agcttatctg ttgttgggca
     1801 tcttgtttta tgtttgctct ttgctgaaga gcgtctgaaa tgtgtcattc tccttcaatt
     1861 atgtcagcat ccatgtgatt cttccatata gttctctgtt tgcctgtctt gcaaggccca
     1921 aggagacact gaatgtgttg tcttcctcgt gctatctatg atggattgca ctttttaaat
     1981 actcaaggct tgttggtgag gtgttgccag gaaatagttt tcttcgcctt ttttctgatt
     2041 tctgtttctg cgggggaaag ccacttagag gagaggtaca gttgagctag caatgactgg
     2101 actgatgtgg gttagcgatc ctgggaattg gaagaatggg gctatgttac caccttccca
     2161 gttattctgt agacagcagg gtcttcctat agctaagtct tcacctcatt ttctgtccta
     2221 gttgtgagac agaattaaaa ttaacatttg tgaatggtca aatatgtcca ggcaatgacc
     2281 tctacctttc cgccacttta tccccaaatt cttatgtgta cagcttggat atacacagac
     2341 caccatagaa attcaggctt ctattctctg gccacagcct gtagctgttt ctagtctcac
     2401 aagctcccat ccttttagac ctttttaggt gtgactttcg atttgagggg tgattatttt
     2461 gctaataata atgaaacata attgtcgtaa cagtaacatt aatactcatt agtctccatt
     2521 gagtacttgg ttggagaaag cactttagag gtatgagctc acgcttagca cctcctagga
     2581 gataagttaa ctgttgccat cactgtttta caaagcactc ggaaactcgg aattttcctt
     2641 tcccaagatc cactagcctt tggtaaagcc agaagactga cttgaaaact caagctcttt
     2701 cctatgctga actgctgctt ctatggaatt ttgtatcatt cgattagaac ataatttcat
     2761 tttgaaaaaa aaaaaaaaaa ccactgaatt gcaatgtaaa aatattaagc tagagaactc
     2821 cctaaagcaa ttctgtagtt atgcttgtac atattttatg aaataactcg ctctaaccat
     2881 ttgaatatct gacacaagtt acacatttta ctgcttctaa caataatgaa atattacgtc
     2941 attagtagca agtaagtaca tacttctcat tatattttac tttctaccag aagttattag
     3001 aacaagatgt actttctcta ttctttatta acttccagtg attttttttt agcaaatgtg
     3061 ttttaatatt aataaaaaga gccatattga catttgggaa agtcataagt ctgcaagtga
     3121 tcagctgtga gaaaattatg aaaatgttat aaaatattct tactctaata gttggtgaca
     3181 tttggcattg taactatcac ttaagaaaaa ttaaaaggct ttttaaaagc taacctgttt
     3241 tgttgggggt gctgacatgt atgaatagtt ctgagtgtca taccaagcaa aactctcttc
     3301 aaaatgaaat aaaataaata acagaatgga atgaactaaa
//
