LOCUS       XM_011238390            2881 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus staufen double-stranded RNA binding protein
            2 (Stau2), transcript variant X10, mRNA.
ACCESSION   XM_011238390
VERSION     XM_011238390.3
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000067.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Aug 8, 2019 this sequence version replaced XM_011238390.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2881
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="1"
     gene            1..2881
                     /gene="Stau2"
                     /note="staufen double-stranded RNA binding protein 2;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 27 ESTs, 351 long SRA reads, 7 Proteins,
                     and 99% coverage of the annotated genomic feature by
                     RNAseq alignments, including 25 samples with support for
                     all annotated introns"
                     /db_xref="GeneID:29819"
                     /db_xref="MGI:MGI:1352508"
     CDS             288..1853
                     /gene="Stau2"
                     /codon_start=1
                     /product="double-stranded RNA-binding protein Staufen
                     homolog 2 isoform X4"
                     /protein_id="XP_011236692.1"
                     /db_xref="GeneID:29819"
                     /db_xref="MGI:MGI:1352508"
                     /translation="MANPKEKTPVCLVNELARFHSIQPQYKLLNESGPAHSKMFSVQL
                     SLGEQTWESEGSSIKKAQQAVANKALTESTLPKPVQKPPKSNVNNNPGSITPTVELNG
                     LAMKRGEPAIYRPLDPKPFPNYRANYNFRGMYNQRYHCPMPKIFYVQLTVGNNEFFGE
                     GKTRQAARHNAAMKALQALQNEPIPEKSPQNGESGKEMDDDKDANKSEISLVFEIALK
                     RNMPVSFEVIKESGPPHMKSFVTRVSVGEFSAEGEGNSKKLSKKRAATTVLQELKKLP
                     PLPVVEKPKLFFKKRPKTIVKAGPDYGQGMNPISRLAQIQQARKEKEPDYILLSERGM
                     PRRREFVMQVKVGNEVATGTGPNKKIAKKNAAEAMLLQLGYKASTSLQDPLDKTGENK
                     GWSGPKPGFPEPTNNTPKGILHLSPDVYQEMEASRHRVTSGTTLSYLSPKDMNQPSSS
                     FFSVSPSSTSSATVARELLMNGTSPTAEAIGLKGSSPTSPCSSVQPSKQLEYLARIQG
                     FQTSQASAGESRQ"
ORIGIN      
        1 gagctggcgc gggggcgcgc ggcgtggcgc gggcgcggcg gcgcaggcgg gggcgcgcgg
       61 cgcgggcccg ggagggcgcg gcgggagcgc agggcggcag gcggaggcgg ggggcgggag
      121 ccgaggaggg agcaggcggc gtcggcggag ctctggagcg ctcgcccatg tggagccgtc
      181 tgccgggcgt ccgtggcccg cagttttgtg gagctgtgag ggatacggaa gtttgatcaa
      241 tattgtctta acatgcttca gataaatcag cttctctcca cgataaaatg gcaaacccca
      301 aagagaaaac tccagtgtgt ctggtaaatg agttagcccg tttccatagc atccaacccc
      361 agtataagct tctgaatgaa agcgggcctg ctcattcgaa gatgttttcg gtgcagctga
      421 gtcttggcga gcagacatgg gaatccgaag ggagcagtat aaagaaggcc caacaagctg
      481 ttgctaacaa agctttgact gaatctacgc ttcccaaacc agttcagaaa ccacctaaaa
      541 gtaatgtcaa taataaccca ggtagtataa ctccaactgt ggaactgaat gggctcgcta
      601 tgaaaagggg agagcctgcc atctacaggc cactagatcc aaagccattc ccaaattata
      661 gagctaacta caacttccgg ggcatgtaca atcagaggta tcattgccca atgcccaaga
      721 tcttttatgt tcagttaact gtaggaaata atgaattctt tggtgaaggg aagactcgac
      781 aagctgccag acacaatgct gcgatgaaag cgcttcaagc cctacagaat gagccaattc
      841 cagaaaagtc tccccagaat ggtgaatcag gaaaagaaat ggatgacgat aaagatgcaa
      901 ataaatctga aataagctta gtgtttgaga ttgcgctgaa gagaaatatg cctgtcagtt
      961 ttgaggttat taaagaaagt ggaccaccac atatgaagag ttttgtaact cgggtgtcag
     1021 tgggagaatt ttctgcagaa ggagagggaa atagcaaaaa actctccaag aagcgtgccg
     1081 caaccactgt cttacaggag cttaaaaaac tcccacctct tcctgtggta gagaagccaa
     1141 aactattttt taaaaaacgc cctaaaacaa tagtaaaggc tggacccgac tatggtcaag
     1201 gaatgaaccc cattagccgc ctggctcaga tccagcaagc cagaaaggaa aaggagcctg
     1261 attacatcct actctcagaa cgaggaatgc ctcgccgtcg agagttcgta atgcaggtca
     1321 aggtaggcaa tgaagttgcg actggaacag gacccaataa aaagatagcc aaaaaaaatg
     1381 ctgctgaagc aatgctgtta cagcttggct ataaagcgtc caccagtctt caggatccgc
     1441 tcgacaagac aggtgaaaac aaaggatgga gtggtccaaa gcctgggttt cctgaaccaa
     1501 caaataacac tccaaaagga attcttcatc tttctcctga tgtttatcaa gagatggaag
     1561 ctagccgcca cagagtgacc tctggcacaa ctctaagcta cttatctccc aaagatatga
     1621 accaaccttc aagctctttc ttcagtgtgt ctccctcatc aactagttca gccacagttg
     1681 ccagggaact ccttatgaat ggaacatctc ctactgctga agccataggt ttaaaaggaa
     1741 gttctcctac ttccccttgt tcttcagtac agccttcaaa acaactggaa tatttagcaa
     1801 ggattcaagg ctttcagaca agccaagcat ctgcgggaga aagcagacaa taaccaggcg
     1861 aagccggcct ccatctctca ggactgcaag aaatcaaagt cggccatcta gcagctccca
     1921 gaacccacgg ctgccactgc gtccgtataa acctgtcagc acgcacgagg gtgtctgtgt
     1981 tctaggaaac gaatgactaa tagcattatg agtcttatgt gaagacaaca ctattctaac
     2041 acaggagata atgtacttgg tactgtttat tcaactgggg gaaaataaaa ctttgagcat
     2101 ttcccttgga acttgagatc agatcataac tcacttgccc agaggcagca gaaatctgat
     2161 cctactactg gagcttaaaa ataacaatta atgaaaagtg ttagaaacaa ggctacagtt
     2221 ttaaaatggc ttggttctgt ccttgcaatt gctttgtcgt ggcaagtgtg ttgttctact
     2281 ctctcttgtt tgaaacaatg cttgacaatt cagaaattaa ccactgatgt gctgtggaat
     2341 gtgatgcttg tcctcatata gtctcagttt ctctttttat gcagatattt gtgaccttca
     2401 tcttgcacat acaaccaaat tattttaagg tgcatagcac aaagatgtat gcaaacaact
     2461 gttttaaatc aggtctgata actgatttaa atataaataa tactaggaac aagtagtttc
     2521 catatatttc ggaactttta aaaagacaaa atgaaacaaa accgagcagt tatgggtttt
     2581 gttctatagg atgccatcag ccatcgaggg ggcgtcttgc ctctgcccat cgctccagga
     2641 gtctacgctg tcgtggaaat tgtgcccacc cccatctgtg tgttgtagcc actcactgtt
     2701 cacatcgagt gtctctagta actgcctctg gactcggaac agtgagtagg atcaaaataa
     2761 atactgtaca tggtggggaa tggaatgcct gttggagaag cttctagcca atcacgctct
     2821 ggaccagcat gttggaatcc agtgtggggc aaatgcagta aagatttgtt ccgtttctgt
     2881 a
//
