LOCUS       XM_030252467            4135 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus signal transducer and activator of
            transcription 1 (Stat1), transcript variant X2, mRNA.
ACCESSION   XM_030252467
VERSION     XM_030252467.2
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000067.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_030252467.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4135
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="1"
     gene            1..4135
                     /gene="Stat1"
                     /gene_synonym="2010005J02Rik"
                     /note="signal transducer and activator of transcription 1;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 62 ESTs, 394 long SRA reads, 15 Proteins,
                     and 99% coverage of the annotated genomic feature by
                     RNAseq alignments, including 44 samples with support for
                     all annotated introns"
                     /db_xref="GeneID:20846"
                     /db_xref="MGI:MGI:103063"
     CDS             260..2509
                     /gene="Stat1"
                     /gene_synonym="2010005J02Rik"
                     /codon_start=1
                     /product="signal transducer and activator of transcription
                     1 isoform X1"
                     /protein_id="XP_030108327.1"
                     /db_xref="GeneID:20846"
                     /db_xref="MGI:MGI:103063"
                     /translation="MSQWFELQQLDSKFLEQVHQLYDDSFPMEIRQYLAQWLEKQDWE
                     HAAYDVSFATIRFHDLLSQLDDQYSRFSLENNFLLQHNIRKSKRNLQDNFQEDPVQMS
                     MIIYNCLKEERKILENAQRFNQAQEGNIQNTVMLDKQKELDSKVRNVKDQVMCIEQEI
                     KTLEELQDEYDFKCKTSQNREGEANGVAKSDQKQEQLLLHKMFLMLDNKRKEIIHKIR
                     ELLNSIELTQNTLINDELVEWKRRQQSACIGGPPNACLDQLQSWFTIVAETLQQIRQQ
                     LKKLEELEQKFTYEPDPITKNKQVLSDRTFLLFQQLIQSSFVVERQPCMPTHPQRPLV
                     LKTGVQFTVKLRLLVKLQELNYNLKVKVSFDKDVNEKNTVKGFRKFNILGTHTKVMNM
                     EESTNGSLAAEFRHLQLKEQKNAGNRTNEGPLIVTEELHSLSFETQLCQPGLVIDLET
                     TSLPVVVISNVSQLPSGWASILWYNMLVTEPRNLSFFLNPPCAWWSQLSEVLSWQFSS
                     VTKRGLNADQLSMLGEKLLGPNAGPDGLIPWTRFCKENINDKNFSFWPWIDTILELIK
                     KHLLCLWNDGCIMGFISKERERALLKDQQPGTFLLRFSESSREGAITFTWVERSQNGG
                     EPDFHAVEPYTKKELSAVTFPDIIRNYKVMAAENIPENPLKYLYPNIDKDHAFGKYYS
                     RPKEAPEPMELDDPKRTGYIKTELISVSEVHPSRLQTTDNLLPMSPEEFDEMSRIVGP
                     EFDSMMSTV"
ORIGIN      
        1 actttcggtt ttcagcgccg agtctgtcaa agctccctgg agacctccgg gaccgcgccc
       61 ctcagaccca cttgggacac tgctgagcgg cgcagagaga tttgcccaga ctcgagctcc
      121 tgcgtgcagt gatcgtttca gctctgctcc ataccctgag ccggcgccac gccgccgcgc
      181 atgcaactgg catataactt gctgtgtgtg gtgattgctt gtgttgaatc ccgaacctgc
      241 acccggagac agcccaagga tgtcacagtg gttcgagctt cagcagctgg actccaagtt
      301 cctggagcag gtccaccagc tgtacgatga cagtttcccc atggaaatca gacagtacct
      361 ggcccagtgg ctggaaaagc aagactggga gcacgctgcc tatgatgtct cgtttgcgac
      421 catccgcttc catgacctcc tctcacagct ggacgaccag tacagccgct tttctctgga
      481 gaataatttc ttgttgcagc acaacatacg gaaaagcaag cgtaatctcc aggataactt
      541 ccaagaagat cccgtacaga tgtccatgat catctacaac tgtctgaagg aagaaaggaa
      601 gattttggaa aatgcccaaa gatttaatca ggcccaggag ggaaatattc agaacactgt
      661 gatgttagat aaacagaagg agctggacag taaagtcaga aatgtgaagg atcaagtcat
      721 gtgcatagag caggaaatca agaccctaga agaattacaa gatgaatatg actttaaatg
      781 caaaacctct cagaacagag aaggtgaagc caatggtgtg gcgaagagcg accaaaaaca
      841 ggaacagctg ctgctccaca agatgttttt aatgcttgac aataagagaa aggagataat
      901 tcacaaaatc agagagttgc tgaattccat cgagctcact cagaacactc tgattaatga
      961 cgagctcgtg gagtggaagc gaaggcagca gagcgcctgc atcgggggac cgcccaacgc
     1021 ctgcctggat cagctgcaaa gctggttcac cattgttgca gagaccctgc agcagatccg
     1081 tcagcagctt aaaaagctgg aggagttgga acagaaattc acctatgagc ccgaccctat
     1141 tacaaaaaac aagcaggtgt tgtcagatcg aaccttcctc ctcttccagc agctcattca
     1201 gagctccttc gtggtagaac gacagccgtg catgcccact cacccgcaga ggcccctggt
     1261 cttgaagact ggggtacagt tcactgtcaa gctgagactg ttggtgaaat tgcaagagct
     1321 gaactataac ttgaaagtga aagtctcatt tgacaaagat gtgaacgaga aaaacacagt
     1381 taaaggattt cggaagttca acatcttggg tacgcacaca aaagtgatga acatggaaga
     1441 atccaccaac ggaagtctgg cagctgagtt ccgacacctg caactgaagg aacagaaaaa
     1501 cgctgggaac agaactaatg aggggcctct cattgtcacc gaagaacttc actctcttag
     1561 ctttgaaacc cagttgtgcc agccaggctt ggtgattgac ctggagacca cctctcttcc
     1621 tgtcgtggtg atctccaacg tcagccagct ccccagtggc tgggcgtcta tcctgtggta
     1681 caacatgctg gtgacagagc ccaggaatct ctccttcttc ctgaaccccc cgtgcgcgtg
     1741 gtggtcccag ctctcagagg tgttgagttg gcagttttca tcagtcacca agagaggtct
     1801 gaacgcagac cagctgagca tgctgggaga gaagctgctg ggccctaatg ctggccctga
     1861 tggtcttatt ccatggacaa ggttttgtaa ggaaaatatt aatgataaaa atttctcctt
     1921 ctggccttgg attgacacca tcctagagct cattaagaag cacctgctgt gcctctggaa
     1981 tgatgggtgc attatgggct tcatcagcaa ggagcgagaa cgcgctctgc tcaaggacca
     2041 gcagccaggg acgttcctgc ttagattcag tgagagctcc cgggaagggg ccatcacatt
     2101 cacatgggtg gaacggtccc agaacggagg tgaacctgac ttccatgccg tggagcccta
     2161 cacgaaaaaa gaactttcag ctgttacttt cccagatatt attcgcaact acaaagtcat
     2221 ggctgccgag aacataccag agaatcccct gaagtatctg taccccaata ttgacaaaga
     2281 ccacgccttt gggaagtatt attccagacc aaaggaagca ccagaaccga tggagcttga
     2341 cgaccctaag cgaactggat acatcaagac tgagttgatt tctgtgtctg aagtccaccc
     2401 ttctagactt cagaccacag acaacctgct tcccatgtct ccagaggagt ttgatgagat
     2461 gtcccggata gtgggccccg aatttgacag tatgatgagc acagtataaa cacgaatttc
     2521 tctctggcga catttttttc ccatctgtga ttccttcctg ctactgttcc ttcatatgca
     2581 gtatttctag ggaaatgcaa gaaagaaaga gcatcacatt tgctgagcac tgctggtaga
     2641 aagtggatat ttctctaatt agaaacctgt tactctgaag gacttcatgc atcttactga
     2701 aggtgaaatg gaaagtcact taacacaaaa tggattttgt aaacaaagac caagagatcc
     2761 acccaagcac caggactaga gtgcgagtat ttggggcaag gtgaggagaa cggtcacttt
     2821 agtaatggtc tgtaatcagt gcccaagtgc tgcacatcac tggaaagaga catacttatg
     2881 ggggaggggc cttcttgatg gaggaatgtt tctgtcccgg gagacattgg cacttcccct
     2941 ctcctggatg gccggaagtc ttccactgtt ttacatatgg cacagttcaa agtcaacttt
     3001 agatccaatg ctctatcaaa ctatagtggg catccttcat gtgagtggga agaaaacaac
     3061 cgtgctcctt actgcagctt ctgccaaggc atggttgctc tcctcaggga ctagctttgt
     3121 tggtggcaat ggctacacaa aactaaacac caacagaagt aagaccattt tcatgagtac
     3181 tccatcaagt taaagggttt ttgttgtctt tttggtcatg gattgaataa aattgtcttt
     3241 gcacatccat taagggggcc agctttctta aagcaatttt tctttttttt taactaaaat
     3301 tagatatagg tgaactcatg ttttttagtg ggctgaactt atcggtttta gctggttgtc
     3361 ttaattagcc ataaacttgg agaaagcagt gacttcttga atccttagcc aaatatgagt
     3421 atcagataat tttattattt ttttttcgag acagggtttc tctgtgtagc cctggctatt
     3481 ctggaactca ctctgtagat caggctggcc tggaactcag aaatccgcct gtctctgcct
     3541 cccgagtgct gggattaaag gtgtgcacca ccaatgcctg gtgagataac tttaaagaac
     3601 tccctataaa tgcatgagaa ccactgttac tgatgaatgt ggttttttga caactacatt
     3661 cacaaatggc ctgtcttgtg ttttgtcacc gttttgaggg atgatgtttt gtggcacgtg
     3721 tgtgatcaca gcctgatggt tctggtcgtg ggttggttct tctgggccag ctttcacaga
     3781 ctgctgcgca gctgcaccta cagtgctgcc ccataatact gtttcacttt ggtgaagatc
     3841 agcccacctt acaccccgag tgcaggtgtg aaccacggta agtgtgcaca gtccttaggg
     3901 aaaacaggga cgcagaggcc tgcctcctct cttttccatg ccaaaatgaa atgaccaaga
     3961 aacaaaacat ttaaaaagtt gtttctaaat gctgagacct aaccattgct tatatactgt
     4021 tgtctgttga aacagtttgt tacaatttca ttctgttgaa ctaggtgaga ctttaagaaa
     4081 tgttgaaatt atgttaattt cctattatta tttaatataa agatatttaa aatgt
//
