LOCUS       NM_199066                877 bp    mRNA    linear   ROD 07-AUG-2023
DEFINITION  Mus musculus SSX member B9 (Ssxb9), mRNA.
ACCESSION   NM_199066 XM_001004602
VERSION     NM_199066.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 877)
  AUTHORS   Chen YT, Alpen B, Ono T, Gure AO, Scanlan MA, Biggs WH 3rd, Arden
            K, Nakayama E and Old LJ.
  TITLE     Identification and characterization of mouse SSX genes: a multigene
            family on the X chromosome with restricted cancer/testis expression
  JOURNAL   Genomics 82 (6), 628-636 (2003)
   PUBMED   14611804
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BX890632.7.
            
            On May 15, 2009 this sequence version replaced NM_199066.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AY244800.1 [ECO:0000332]
            RNAseq introns              :: partial sample support SAMN00849384
                                           [ECO:0000350]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-124               BX890632.7         63272-63395
            125-251             BX890632.7         65836-65962
            252-366             BX890632.7         66416-66530
            367-456             BX890632.7         66830-66919
            457-506             BX890632.7         67395-67444
            507-582             BX890632.7         68057-68132
            583-699             BX890632.7         70984-71100
            700-877             BX890632.7         71505-71682
FEATURES             Location/Qualifiers
     source          1..877
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 3.79 cM"
     gene            1..877
                     /gene="Ssxb9"
                     /note="SSX member B9"
                     /db_xref="GeneID:387131"
                     /db_xref="MGI:MGI:2446778"
     exon            1..124
                     /gene="Ssxb9"
                     /inference="alignment:Splign:2.1.0"
     exon            125..251
                     /gene="Ssxb9"
                     /inference="alignment:Splign:2.1.0"
     CDS             138..695
                     /gene="Ssxb9"
                     /note="synovial sarcoma, X member B9"
                     /codon_start=1
                     /product="synovial sarcoma, X member B, breakpoint 9"
                     /protein_id="NP_951021.2"
                     /db_xref="CCDS:CCDS29996.2"
                     /db_xref="GeneID:387131"
                     /db_xref="MGI:MGI:2446778"
                     /translation="MLEEDKIVSFQNHTDMETVSSCEKVPMEVLYEPKNICKAFQDIS
                     TYFSDEEWGKLTQWQKSAYVYMKRNYIRMTDLGVTVNQPVFMRGKEQDKQSLVEGIED
                     HDSDDECFEGSFGVTPRKRMKLTSVTISIHNVEGSLASVKNDSNLAETSGIRVNVWSH
                     RLRERKYRVIYEEISDPEEEEDDDY"
     exon            252..366
                     /gene="Ssxb9"
                     /inference="alignment:Splign:2.1.0"
     exon            367..456
                     /gene="Ssxb9"
                     /inference="alignment:Splign:2.1.0"
     exon            457..506
                     /gene="Ssxb9"
                     /inference="alignment:Splign:2.1.0"
     exon            507..582
                     /gene="Ssxb9"
                     /inference="alignment:Splign:2.1.0"
     exon            583..699
                     /gene="Ssxb9"
                     /inference="alignment:Splign:2.1.0"
     exon            700..877
                     /gene="Ssxb9"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cagtttcctg aggaattcaa agggtttggc tgccctggtt gctgagtctc tagcaacagc
       61 tgaatcaagg tgcatatttg ggtctcttct tggataaaca cttctttgtc ccttcctgtc
      121 tgaggacatt tggttttatg cttgaagaag ataagattgt gtcttttcaa aatcacactg
      181 acatggaaac agtgagttcc tgtgaaaagg tccccatgga agtgctttat gaaccaaaga
      241 atatctgcaa ggccttccag gatatttcta catacttctc tgatgaagag tggggaaagc
      301 tgactcaatg gcagaaaagt gcctacgtgt acatgaaaag aaactacatc agaatgactg
      361 acctaggggt caccgtgaac caaccagttt tcatgcgtgg caaggagcag gacaagcaat
      421 ccctggtcga aggcattgaa gatcatgaca gtgatgatga atgctttgaa ggatcttttg
      481 gtgtgacacc gagaaaacga atgaagctga catcagtgac aataagtatt cataatgtag
      541 aaggaagcct tgcctctgta aagaatgatt ccaacttggc agaaactagt ggcattcggg
      601 tcaatgtttg gagccaccgg ctgcgagaga ggaagtatcg agtgatatat gaagagatta
      661 gtgatcctga agaggaagaa gatgatgatt actgaactga cagttgaaat aaggccacgg
      721 tggaagaagg atggagtggc aattcaacat tacagctcca gctttgaaag actaaatatc
      781 agcagtatag atacatacat ttatttatat atttattgat tatatacatt tatacctata
      841 tttatttatt tataaaagtc tactagaatt ctgagtt
//
