LOCUS       NM_001081565             518 bp    mRNA    linear   ROD 04-AUG-2023
DEFINITION  Mus musculus SSX member B8 (Ssxb8), mRNA.
ACCESSION   NM_001081565 XM_001006623 XM_904834 XM_919009 XM_919014
VERSION     NM_001081565.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 518)
  AUTHORS   Chen YT, Alpen B, Ono T, Gure AO, Scanlan MA, Biggs WH 3rd, Arden
            K, Nakayama E and Old LJ.
  TITLE     Identification and characterization of mouse SSX genes: a multigene
            family on the X chromosome with restricted cancer/testis expression
  JOURNAL   Genomics 82 (6), 628-636 (2003)
   PUBMED   14611804
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL844482.6.
            
            On Aug 21, 2008 this sequence version replaced NM_001081565.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AY244799.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384, SAMN01164132
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-74                AL844482.6         35497-35570         c
            75-189              AL844482.6         34927-35041         c
            190-279             AL844482.6         34538-34627         c
            280-329             AL844482.6         34013-34062         c
            330-405             AL844482.6         33328-33403         c
            406-518             AL844482.6         30057-30169         c
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 3.94 cM"
     gene            1..518
                     /gene="Ssxb8"
                     /note="SSX member B8"
                     /db_xref="GeneID:631002"
                     /db_xref="MGI:MGI:2446777"
     exon            1..74
                     /gene="Ssxb8"
                     /inference="alignment:Splign:2.1.0"
     CDS             6..518
                     /gene="Ssxb8"
                     /note="synovial sarcoma, X member B family member;
                     synovial sarcoma, X member B8"
                     /codon_start=1
                     /product="synovial sarcoma, X member B, breakpoint 8"
                     /protein_id="NP_001075034.3"
                     /db_xref="CCDS:CCDS40848.1"
                     /db_xref="GeneID:631002"
                     /db_xref="MGI:MGI:2446777"
                     /translation="METVSFCEKVPMEVLYEPKNICKAFQDISTYFSDEEWGKLTQWQ
                     KSAYVYMKRNYIRMTDLGVTVNQPVFMSGKEQDKQSLVEGIEVHDSEDECFEGSFGVT
                     PIKQMKLTPVTISIHNVEGSLASGENNSNLAETSGIQVNVWSHRLRERKYRVIYEEIS
                     DPEEEEDDDY"
     exon            75..189
                     /gene="Ssxb8"
                     /inference="alignment:Splign:2.1.0"
     exon            190..279
                     /gene="Ssxb8"
                     /inference="alignment:Splign:2.1.0"
     exon            280..329
                     /gene="Ssxb8"
                     /inference="alignment:Splign:2.1.0"
     exon            330..405
                     /gene="Ssxb8"
                     /inference="alignment:Splign:2.1.0"
     exon            406..518
                     /gene="Ssxb8"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctgacatgga aacagtgagt ttctgtgaaa aggtccccat ggaagtgctt tatgaaccaa
       61 agaatatctg caaggccttc caggatattt ctacatactt ctctgatgaa gagtggggaa
      121 agctgactca atggcagaaa agtgcctacg tgtacatgaa aagaaactac atcagaatga
      181 ctgacctagg ggtcaccgtg aaccaaccag ttttcatgag tggcaaggag caggacaagc
      241 aatccctggt cgaaggcatt gaagttcatg acagtgaaga tgaatgcttt gaaggatctt
      301 ttggtgtgac accgataaaa caaatgaagc tgacaccagt gacaataagt attcataatg
      361 tagaaggaag ccttgcatct ggagagaata attccaactt ggcagaaact agtggcattc
      421 aggtcaatgt ttggagccac cggctgcgag agaggaagta tcgagtgata tatgaagaga
      481 ttagtgatcc tgaagaggaa gaagacgatg attactga
//
