LOCUS       NM_001205108             522 bp    mRNA    linear   ROD 07-AUG-2023
DEFINITION  Mus musculus SSX member B6 (Ssxb6), mRNA.
ACCESSION   NM_001205108 XM_001474364 XM_001481250
VERSION     NM_001205108.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 522)
  AUTHORS   Chen YT, Alpen B, Ono T, Gure AO, Scanlan MA, Biggs WH 3rd, Arden
            K, Nakayama E and Old LJ.
  TITLE     Identification and characterization of mouse SSX genes: a multigene
            family on the X chromosome with restricted cancer/testis expression
  JOURNAL   Genomics 82 (6), 628-636 (2003)
   PUBMED   14611804
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AY244797.1 and BX890578.6.
            
            On or before Mar 25, 2011 this sequence version replaced
            XM_001481250.2, XM_001474364.2.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AY244797.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-421               AY244797.1         2-422
            422-522             BX890578.6         46849-46949         c
FEATURES             Location/Qualifiers
     source          1..522
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="BALB/c"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 3.87 cM"
     gene            1..522
                     /gene="Ssxb6"
                     /note="SSX member B6"
                     /db_xref="GeneID:668976"
                     /db_xref="MGI:MGI:2446775"
     exon            1..74
                     /gene="Ssxb6"
                     /inference="alignment:Splign:2.1.0"
     CDS             6..518
                     /gene="Ssxb6"
                     /note="synovial sarcoma, X member B6"
                     /codon_start=1
                     /product="synovial sarcoma, X member B, breakpoint 6"
                     /protein_id="NP_001192037.1"
                     /db_xref="CCDS:CCDS81099.1"
                     /db_xref="GeneID:668976"
                     /db_xref="MGI:MGI:2446775"
                     /translation="METVSSCEKIPMEVLYEPKNICKAFQDISTYFSDEEWVKLTQWQ
                     KSAYVYMKRNYIRMTDLGVTVNQPVFMRGKEQAKQSLVEGIEIHDSDDECFEGSFGVT
                     PIKRMKLTSVTISIHNVEGSHDSGENDSNLAETGGIQVNVWSHRLRERKYRVIYSEIS
                     DPEEEEDDDY"
     exon            75..189
                     /gene="Ssxb6"
                     /inference="alignment:Splign:2.1.0"
     exon            190..279
                     /gene="Ssxb6"
                     /inference="alignment:Splign:2.1.0"
     exon            280..329
                     /gene="Ssxb6"
                     /inference="alignment:Splign:2.1.0"
     exon            330..405
                     /gene="Ssxb6"
                     /inference="alignment:Splign:2.1.0"
     exon            406..522
                     /gene="Ssxb6"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctgacatgga aacagtgagt tcctgtgaaa agatccccat ggaagtgctt tatgaaccaa
       61 agaatatctg caaggcattc caggatattt ctacatactt ctctgatgaa gagtgggtaa
      121 agctgactca atggcagaaa agtgcctatg tgtacatgaa aagaaactac atcagaatga
      181 ctgacctagg tgtcactgtg aaccaaccag ttttcatgcg tggcaaggag caggccaagc
      241 aatccctggt cgaaggcatt gaaattcatg acagtgatga tgaatgcttt gaaggatctt
      301 ttggtgtgac accgataaaa cgaatgaagc tgacatcagt gacaataagt attcataatg
      361 tagaaggaag ccatgactct ggagagaatg attcaaactt ggcagaaact ggtggcattc
      421 aggtcaatgt ttggagccac cggctgcgag agaggaagta tcgagtgata tattcagaga
      481 ttagtgatcc tgaagaggaa gaagatgatg attactgaac cg
//
