LOCUS       NM_001001450             957 bp    mRNA    linear   ROD 04-AUG-2023
DEFINITION  Mus musculus SSX member B2 (Ssxb2), transcript variant 1, mRNA.
ACCESSION   NM_001001450 XM_486613
VERSION     NM_001001450.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 957)
  AUTHORS   Chen YT, Alpen B, Ono T, Gure AO, Scanlan MA, Biggs WH 3rd, Arden
            K, Nakayama E and Old LJ.
  TITLE     Identification and characterization of mouse SSX genes: a multigene
            family on the X chromosome with restricted cancer/testis expression
  JOURNAL   Genomics 82 (6), 628-636 (2003)
   PUBMED   14611804
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC048441.1 and AY244793.1.
            
            On Aug 21, 2008 this sequence version replaced NM_001001450.3.
            
            Transcript Variant: This variant (1) represents the longer
            transcript and encodes the longer isoform (1).
            
            ##Evidence-Data-START##
            Transcript exon combination :: AY244793.1, AK076879.1 [ECO:0000332]
            RNAseq introns              :: partial sample support SAMN00849384
                                           [ECO:0000350]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-8                 BC048441.1         1-8
            9-766               AY244793.1         10-767
            767-957             BC048441.1         590-780
FEATURES             Location/Qualifiers
     source          1..957
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 3.83 cM"
     gene            1..957
                     /gene="Ssxb2"
                     /note="SSX member B2"
                     /db_xref="GeneID:387132"
                     /db_xref="MGI:MGI:2446771"
     exon            1..123
                     /gene="Ssxb2"
                     /inference="alignment:Splign:2.1.0"
     exon            124..300
                     /gene="Ssxb2"
                     /inference="alignment:Splign:2.1.0"
     CDS             248..745
                     /gene="Ssxb2"
                     /note="isoform 1 is encoded by transcript variant 1;
                     synovial sarcoma, X member B, breakpoint 2; synovial
                     sarcoma, X member B2"
                     /codon_start=1
                     /product="synovial sarcoma, X member B, breakpoint 2
                     isoform 1"
                     /protein_id="NP_001001450.1"
                     /db_xref="CCDS:CCDS29998.1"
                     /db_xref="GeneID:387132"
                     /db_xref="MGI:MGI:2446771"
                     /translation="MMQCTVLQNGDLNSLKRRTFGFVLEEDKIVSFQNHPDMETVSSC
                     EKNPMEVLYEPKNICKAFQDISTYFSDEEWGKLTQWQKSAYVYMKRNYIRMTDLGVTV
                     NQPVFMRGKEQDKQSLVEGIEVHDSDETSGIRVNVWSHRLRERKYRVIYEEISDPEEE
                     EDDDY"
     exon            301..427
                     /gene="Ssxb2"
                     /inference="alignment:Splign:2.1.0"
     exon            428..542
                     /gene="Ssxb2"
                     /inference="alignment:Splign:2.1.0"
     exon            543..632
                     /gene="Ssxb2"
                     /inference="alignment:Splign:2.1.0"
     exon            633..749
                     /gene="Ssxb2"
                     /inference="alignment:Splign:2.1.0"
     exon            750..929
                     /gene="Ssxb2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agttacctga ggaattcaaa gggtttggct gccctggttg ctgagtctct agcaacagct
       61 gaatccgggt gcttatttgg gtctcttctt ggataaacac tcctttgtcc cttcctgtct
      121 gagctcagca tcgccatata gccatttcct aggtccctgg aaaccatcag ttgggacagg
      181 gggactatta aatctgtggc aatcctctca ccaagtatat attggacaca ccacaaaaga
      241 tctacacatg atgcagtgca ctgtactaca aaatggtgat ctaaattcct taaaacgcag
      301 gacatttggt tttgtgcttg aagaagacaa gattgtgtct tttcaaaatc accctgacat
      361 ggaaacagtg agttcctgtg aaaagaaccc catggaagtg ctttatgaac caaagaatat
      421 ctgcaaggcc ttccaggata tttctacata cttctctgat gaagagtggg gaaagctgac
      481 tcaatggcag aaaagtgcct acgtgtacat gaaaagaaac tacatcagaa tgactgacct
      541 aggggtcacc gtgaaccaac cggttttcat gcgtggtaag gagcaggaca agcaatccct
      601 ggttgaaggc attgaagttc atgacagtga tgaaactagt ggcattcggg tcaatgtttg
      661 gagccaccgg ctgcgagaga ggaagtatcg agtgatatat gaagagatta gtgatcctga
      721 agaggaagaa gacgatgatt actgaaccaa cagtcgaaat aagcccacgg tggaagaagg
      781 atggagtggc gattcaacat cacagctaca gctttgaaag actaaatatc agcagtatag
      841 atacatacat ttatttatat atttattgat gatatacact tatacctata tttatttatt
      901 tataaaagtc tactggaatt ctgagttaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa
//
