LOCUS       NM_001126491             540 bp    mRNA    linear   ROD 07-AUG-2023
DEFINITION  Mus musculus SSX member B15 (Ssxb15), mRNA.
ACCESSION   NM_001126491 XM_620949
VERSION     NM_001126491.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 540)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     INFERRED REFSEQ: This record is predicted by genome sequence
            analysis and is not yet supported by experimental evidence. The
            reference sequence was derived from BX890578.6.
            
            On May 8, 2008 this sequence version replaced XM_620949.4.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMN00849384
                              [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            inferred exon combination :: based on alignments, homology
            RefSeq Select criteria    :: based on expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-96                BX890578.6         29104-29199         c
            97-211              BX890578.6         28535-28649         c
            212-301             BX890578.6         28147-28236         c
            302-351             BX890578.6         27623-27672         c
            352-427             BX890578.6         21716-21791         c
            428-540             BX890578.6         18297-18409         c
FEATURES             Location/Qualifiers
     source          1..540
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 3.86 cM"
     gene            1..540
                     /gene="Ssxb15"
                     /gene_synonym="Gm14459"
                     /note="SSX member B15"
                     /db_xref="GeneID:546263"
                     /db_xref="MGI:MGI:3650385"
     CDS             1..540
                     /gene="Ssxb15"
                     /gene_synonym="Gm14459"
                     /note="novel synovial sarcoma, X member B family member"
                     /codon_start=1
                     /product="synovial sarcoma, X member B family member"
                     /protein_id="NP_001119963.1"
                     /db_xref="CCDS:CCDS52992.1"
                     /db_xref="GeneID:546263"
                     /db_xref="MGI:MGI:3650385"
                     /translation="MVSFQNNTNMETVSSCEKIPMEVLCEPKNICKAFQDISTYFSDE
                     EWGKLTEWQKSAYVYMKRNYIRMTDLGVTVNQPVFMRGKDQDKQCLVEGIEVHDSNDE
                     CFEGSFGVTPRKRMKLTSVTISIHNVEERLASGEYDSNLAETGGIQVNVWSHRLRERK
                     YRVIYSEISDPEEEEDDYY"
     exon            1..96
                     /gene="Ssxb15"
                     /gene_synonym="Gm14459"
                     /inference="alignment:Splign:2.1.0"
     exon            97..211
                     /gene="Ssxb15"
                     /gene_synonym="Gm14459"
                     /inference="alignment:Splign:2.1.0"
     exon            212..301
                     /gene="Ssxb15"
                     /gene_synonym="Gm14459"
                     /inference="alignment:Splign:2.1.0"
     exon            302..351
                     /gene="Ssxb15"
                     /gene_synonym="Gm14459"
                     /inference="alignment:Splign:2.1.0"
     exon            352..427
                     /gene="Ssxb15"
                     /gene_synonym="Gm14459"
                     /inference="alignment:Splign:2.1.0"
     exon            428..540
                     /gene="Ssxb15"
                     /gene_synonym="Gm14459"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggtgtctt ttcaaaataa caccaatatg gaaacagtga gctcctgtga aaagatcccc
       61 atggaagttc tttgtgaacc aaagaatatc tgcaaggcct tccaggatat ttctacatac
      121 ttctctgatg aagagtgggg aaagctgact gaatggcaga aaagtgccta cgtgtacatg
      181 aaaagaaact acatcagaat gactgaccta ggggtcaccg tgaaccaacc agttttcatg
      241 cgtggcaagg atcaggacaa gcaatgcctg gtcgaaggca ttgaagttca tgacagtaat
      301 gatgaatgct ttgaaggatc ttttggtgtg acaccgagaa aacgaatgaa gctgacatcg
      361 gtgacaataa gtattcataa tgtagaagaa agacttgcct ctggagagta tgattccaac
      421 ttggcagaaa ctggtggcat tcaggtcaat gtttggagcc accggctgcg agagaggaag
      481 tatcgagtga tatattcaga gattagtgat cctgaagagg aagaagacga ttattactga
//
