LOCUS       NM_199063                604 bp    mRNA    linear   ROD 07-AUG-2023
DEFINITION  Mus musculus SSX member B13 (Ssxb13), mRNA.
ACCESSION   NM_199063 XM_356318
VERSION     NM_199063.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 604)
  AUTHORS   Chen YT, Alpen B, Ono T, Gure AO, Scanlan MA, Biggs WH 3rd, Arden
            K, Nakayama E and Old LJ.
  TITLE     Identification and characterization of mouse SSX genes: a multigene
            family on the X chromosome with restricted cancer/testis expression
  JOURNAL   Genomics 82 (6), 628-636 (2003)
   PUBMED   14611804
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AL844482.6.
            
            On Nov 17, 2006 this sequence version replaced NM_199063.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AY244795.1, SRR5189685.30189.1
                                           [ECO:0000332]
            RNAseq introns              :: partial sample support SAMN00849384
                                           [ECO:0000350]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-115               AL844482.6         93156-93270
            116-230             AL844482.6         93726-93840
            231-320             AL844482.6         94140-94229
            321-370             AL844482.6         94704-94753
            371-446             AL844482.6         95365-95440
            447-563             AL844482.6         98752-98868
            564-604             AL844482.6         99273-99313
FEATURES             Location/Qualifiers
     source          1..604
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 3.97 cM"
     gene            1..604
                     /gene="Ssxb13"
                     /gene_synonym="Ssx9; Ssxb4"
                     /note="SSX member B13"
                     /db_xref="GeneID:382206"
                     /db_xref="MGI:MGI:2446773"
     exon            1..115
                     /gene="Ssxb13"
                     /gene_synonym="Ssx9; Ssxb4"
                     /inference="alignment:Splign:2.1.0"
     CDS             47..559
                     /gene="Ssxb13"
                     /gene_synonym="Ssx9; Ssxb4"
                     /note="synovial sarcoma, X member B, breakpoint 4;
                     synovial sarcoma, X breakpoint 9; synovial sarcoma, X 9"
                     /codon_start=1
                     /product="SSX member B13"
                     /protein_id="NP_951018.1"
                     /db_xref="CCDS:CCDS30000.1"
                     /db_xref="GeneID:382206"
                     /db_xref="MGI:MGI:2446773"
                     /translation="METLRSCEKIPMEVLYEPKNICKAFQDISTYYSDEEWGKLTQWQ
                     KSAYVYMKRNYIRMTDLGVTMNQPVFMRGKEQAKQSLFEGIEVHDSDVECFEGSFGVI
                     PRKRMKLTLVTISIRNVEERLASGEHDSNLAETGGIQVNVWSNRLRERKYRVIYSEIS
                     YPEEEEDDDY"
     exon            116..230
                     /gene="Ssxb13"
                     /gene_synonym="Ssx9; Ssxb4"
                     /inference="alignment:Splign:2.1.0"
     exon            231..320
                     /gene="Ssxb13"
                     /gene_synonym="Ssx9; Ssxb4"
                     /inference="alignment:Splign:2.1.0"
     exon            321..370
                     /gene="Ssxb13"
                     /gene_synonym="Ssx9; Ssxb4"
                     /inference="alignment:Splign:2.1.0"
     exon            371..446
                     /gene="Ssxb13"
                     /gene_synonym="Ssx9; Ssxb4"
                     /inference="alignment:Splign:2.1.0"
     exon            447..563
                     /gene="Ssxb13"
                     /gene_synonym="Ssx9; Ssxb4"
                     /inference="alignment:Splign:2.1.0"
     exon            564..604
                     /gene="Ssxb13"
                     /gene_synonym="Ssx9; Ssxb4"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tttgcttgaa gaagacaaga ttgggacttt tctaaattac actgacatgg aaacactgag
       61 atcctgtgaa aagatcccca tggaagtgct ttatgaacca aagaatatct gcaaggcctt
      121 ccaggatatt tctacatact actctgatga agagtgggga aagctgactc aatggcagaa
      181 aagtgcctac gtgtacatga aaagaaacta catcagaatg actgacctag gtgtcaccat
      241 gaaccaacca gttttcatgc gtggcaagga gcaggccaag caatccctgt tcgaaggcat
      301 tgaagttcat gacagtgatg ttgaatgctt tgaaggatct tttggtgtga taccgagaaa
      361 acgaatgaag ctgacattgg tgacaataag tattcgtaat gtagaagaaa gacttgcctc
      421 tggagagcat gattccaact tggcagaaac tggtggcatt caggtcaatg tttggagcaa
      481 ccggctgcga gagaggaaat atcgagtgat atattcagag attagttatc ctgaagagga
      541 agaagatgat gattactgaa cttacagtcg aaataagccc acagtggaag aaggagggag
      601 tggc
//
