LOCUS       NM_023546               1216 bp    mRNA    linear   ROD 24-FEB-2022
DEFINITION  Mus musculus spermiogenesis specific transcript on the Y 2 (Ssty2),
            mRNA.
ACCESSION   NM_023546 XM_006536375 XM_904724 XM_918981 XR_390011
VERSION     NM_023546.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1216)
  AUTHORS   Cortez D, Marin R, Toledo-Flores D, Froidevaux L, Liechti A, Waters
            PD, Grutzner F and Kaessmann H.
  TITLE     Origins and functional evolution of Y chromosomes across mammals
  JOURNAL   Nature 508 (7497), 488-493 (2014)
   PUBMED   24759410
REFERENCE   2  (bases 1 to 1216)
  AUTHORS   Cantu C, Valenta T, Hausmann G, Vilain N, Aguet M and Basler K.
  TITLE     The Pygo2-H3K4me2/3 interaction is dispensable for mouse
            development and Wnt signaling-dependent transcription
  JOURNAL   Development 140 (11), 2377-2386 (2013)
   PUBMED   23637336
REFERENCE   3  (bases 1 to 1216)
  AUTHORS   Toure A, Grigoriev V, Mahadevaiah SK, Rattigan A, Ojarikre OA and
            Burgoyne PS.
  TITLE     A protein encoded by a member of the multicopy Ssty gene family
            located on the long arm of the mouse Y chromosome is expressed
            during sperm development
  JOURNAL   Genomics 83 (1), 140-147 (2004)
   PUBMED   14667817
REFERENCE   4  (bases 1 to 1216)
  AUTHORS   Prado VF, Lee CH, Zahed L, Vekemans M and Nishioka Y.
  TITLE     Molecular characterization of a mouse Y chromosomal repetitive
            sequence that detects transcripts in the testis
  JOURNAL   Cytogenet Cell Genet 61 (2), 87-90 (1992)
   PUBMED   1395731
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC137982.3 and BC117086.1.
            
            On or before Jan 5, 2014 this sequence version replaced
            XM_006536375.1, XR_390011.1, NM_023546.2.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR5189685.204049.1 [ECO:0000332]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-111               AC137982.3         56593-56703
            112-898             AC137982.3         57818-58604
            899-1129            BC117086.1         594-824
            1130-1216           AC137982.3         58836-58922
FEATURES             Location/Qualifiers
     source          1..1216
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="Y"
                     /map="Y"
     gene            1..1216
                     /gene="Ssty2"
                     /gene_synonym="1700029H17Rik; pc11"
                     /note="spermiogenesis specific transcript on the Y 2"
                     /db_xref="GeneID:70009"
                     /db_xref="MGI:MGI:1917259"
     exon            1..111
                     /gene="Ssty2"
                     /gene_synonym="1700029H17Rik; pc11"
                     /inference="alignment:Splign:2.1.0"
     exon            112..1216
                     /gene="Ssty2"
                     /gene_synonym="1700029H17Rik; pc11"
                     /inference="alignment:Splign:2.1.0"
     CDS             393..1076
                     /gene="Ssty2"
                     /gene_synonym="1700029H17Rik; pc11"
                     /codon_start=1
                     /product="spermiogenesis specific transcript on the Y 2"
                     /protein_id="NP_076035.3"
                     /db_xref="CCDS:CCDS85893.1"
                     /db_xref="GeneID:70009"
                     /db_xref="MGI:MGI:1917259"
                     /translation="MTSLKKKSRRKHSSQALGNIVGCRISHGWKEGNEPVTHWKAIIL
                     GQLPTNPSLYLVKYDGIDSVYGQELHSDERILNLKVLPHKVDFPQVREVHLAGALVGR
                     EVQHKFEGKDGSEDNWSGMVLAQVPFLQDYFYISYKKDPVLYVYQLLDDYKEGNLHII
                     PETPLAGVRSGDDNDFLIGSWVQYTRDDGSKKFGKVVYKVLANPTVYFIKFLGDLHIY
                     VYTLVSNIT"
ORIGIN      
        1 tgagttcact atcttcacag tggtgtgtca aagccaggtc attttttccc acaggctttt
       61 ggtgcctggt ctgtatcagg agatcttgac gactaggata tttttctatg ggagctcaaa
      121 tctgtttagc ataatcttct tcacctgctc agaagttctc ttagagaaga gtcttggtcc
      181 agcattcact ctcaacccat aaccattgcc catcaggaat tcatatatat gacagaggca
      241 acagcattgt gtctggttta aacgggcaag atcttcagtc ccaggcaatg agcaagtatg
      301 atatttgaag ggaatggaag ccacaagaca gtgtgatcta ccacaacagg tctacagcca
      361 ggtagaagac aatacatctg aagagtctga gcatgacatc actcaagaag aagagtagga
      421 ggaagcattc ttcccaggcc ctggggaata ttgttggctg cagaatttct cacgggtgga
      481 aggaaggtaa tgagcctgtc acccattgga aggccatcat tctaggtcaa ctgccaacaa
      541 acccttctct ttatttggtg aagtatgacg gaattgacag tgtctacgga caggagctcc
      601 acagcgatga gaggatttta aatcttaagg tcttgcctca caaagtagat tttcctcagg
      661 tgagggaggt ccacctcgca ggcgcactgg ttggcagaga ggtacaacac aaatttgagg
      721 ggaaagatgg ctctgaggac aactggagtg ggatggtgct agcccaggtg ccattcttac
      781 aggactattt ttacatttcc tacaagaagg atccggtcct ctacgtctat cagctcctgg
      841 atgactacaa ggaaggtaac ctccacatca ttccagagac ccctctggct ggggtgagat
      901 caggtgatga caatgacttc ttaataggtt cctgggtgca gtacaccaga gatgatggat
      961 ccaaaaagtt cggaaaggtt gtttacaaag ttctagccaa tcctactgtg tactttatca
     1021 aatttctcgg tgacctccat atctatgtct atactctggt gtcaaatatc acttaaattg
     1081 aaaaaaatca caaagtacag aaatgtaaac ttataggatt gaaaaaaaaa tgtttgtttt
     1141 cctgtgttgg gtacctatgg gtctttgaca acctcagtat ctttgtcaat aaaatttgtt
     1201 ttgttctaaa aattaa
//
