LOCUS       NM_009220               1285 bp    mRNA    linear   ROD 07-OCT-2024
DEFINITION  Mus musculus spermiogenesis specific transcript on the Y 1 (Ssty1),
            mRNA.
ACCESSION   NM_009220 XM_888250
VERSION     NM_009220.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1285)
  AUTHORS   Comptour,A., Moretti,C., Serrentino,M.E., Auer,J., Ialy-Radio,C.,
            Ward,M.A., Toure,A., Vaiman,D. and Cocquet,J.
  TITLE     SSTY proteins co-localize with the post-meiotic sex chromatin and
            interact with regulators of its expression
  JOURNAL   FEBS J 281 (6), 1571-1584 (2014)
   PUBMED   24456183
  REMARK    GeneRIF: SSTY proteins interact with SLY protein and its X-linked
            homolog SLX/SLXL1, and may be required for localization of SLX/SLY
            proteins in the spermatid nucleus and sex chromatin.
REFERENCE   2  (bases 1 to 1285)
  AUTHORS   Toure,A., Grigoriev,V., Mahadevaiah,S.K., Rattigan,A.,
            Ojarikre,O.A. and Burgoyne,P.S.
  TITLE     A protein encoded by a member of the multicopy Ssty gene family
            located on the long arm of the mouse Y chromosome is expressed
            during sperm development
  JOURNAL   Genomics 83 (1), 140-147 (2004)
   PUBMED   14667817
  REMARK    GeneRIF: Ssty1 is expressed in spermatids and the protein is absent
            from spermatids of mice that lack Yq.
REFERENCE   3  (bases 1 to 1285)
  AUTHORS   Conway,S.J., Mahadevaiah,S.K., Darling,S.M., Capel,B.,
            Rattigan,A.M. and Burgoyne,P.S.
  TITLE     Y353/B: a candidate multiple-copy spermiogenesis gene on the mouse
            Y chromosome
  JOURNAL   Mamm Genome 5 (4), 203-210 (1994)
   PUBMED   7516747
REFERENCE   4  (bases 1 to 1285)
  AUTHORS   Burgoyne,P.S., Mahadevaiah,S.K., Sutcliffe,M.J. and Palmer,S.J.
  TITLE     Fertility in mice requires X-Y pairing and a Y-chromosomal
            'spermiogenesis' gene mapping to the long arm
  JOURNAL   Cell 71 (3), 391-398 (1992)
   PUBMED   1423603
REFERENCE   5  (bases 1 to 1285)
  AUTHORS   Bishop,C.E. and Hatat,D.
  TITLE     Molecular cloning and sequence analysis of a mouse Y chromosome RNA
            transcript expressed in the testis
  JOURNAL   Nucleic Acids Res 15 (7), 2959-2969 (1987)
   PUBMED   3562242
REFERENCE   6  (bases 1 to 1285)
  AUTHORS   Bishop,C.E., Boursot,P., Baron,B., Bonhomme,F. and Hatat,D.
  TITLE     Most classical Mus musculus domesticus laboratory mouse strains
            carry a Mus musculus musculus Y chromosome
  JOURNAL   Nature 315 (6014), 70-72 (1985)
   PUBMED   2986012
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            X05260.1 and AC134865.3.
            
            On Sep 5, 2007 this sequence version replaced NM_009220.1.
            
            ##Evidence-Data-START##
            CDS exon combination :: GATP01000017.1, AV268362.1 [ECO:0000331]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-631               X05260.1           1-631
            632-632             AC134865.3         127217-127217
            633-1285            X05260.1           633-1285
FEATURES             Location/Qualifiers
     source          1..1285
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="Y"
                     /map="Y"
     gene            1..1285
                     /gene="Ssty1"
                     /gene_synonym="Smy; Ssty"
                     /note="spermiogenesis specific transcript on the Y 1"
                     /db_xref="GeneID:20611"
                     /db_xref="MGI:MGI:1314663"
     exon            1..140
                     /gene="Ssty1"
                     /gene_synonym="Smy; Ssty"
                     /inference="alignment:Splign:2.1.0"
     exon            141..327
                     /gene="Ssty1"
                     /gene_synonym="Smy; Ssty"
                     /inference="alignment:Splign:2.1.0"
     exon            328..1285
                     /gene="Ssty1"
                     /gene_synonym="Smy; Ssty"
                     /inference="alignment:Splign:2.1.0"
     CDS             468..1166
                     /gene="Ssty1"
                     /gene_synonym="Smy; Ssty"
                     /codon_start=1
                     /product="Y-linked testis-specific protein 1"
                     /protein_id="NP_033246.2"
                     /db_xref="CCDS:CCDS85867.1"
                     /db_xref="GeneID:20611"
                     /db_xref="MGI:MGI:1314663"
                     /translation="MSSLMKKRRRKSSSNTLRNIVSCRISHSWKEGNEPVTQWKAIVL
                     DQLPTNPSLYLVKYDGIDSIYVLELYSDDRILNLKVLPPIVVFPQVRDAHLARALVGR
                     AVQHKFERKDGSEVNWRGVVLAQVPIMKDLFYITYKKDPALYAYQLLDDYKEGNLHMI
                     PDTPPAEERSGDDSDVLIGNWVEYTRKDGSKKFGKVVYQVLANPSVYFIKFHGDIHIY
                     VYTMVPKILEVEKS"
     polyA_site      1285
                     /gene="Ssty1"
                     /gene_synonym="Smy; Ssty"
                     /note="pot. polyA signal"
ORIGIN      
        1 tgcctagaag gtgtgtccac tattttccca gtggtctgtg aaaggcaagc cagctcctga
       61 actccaactt gttcctcaag cttttgtggc ctggtctgta tcaaaagaca gaatcttgac
      121 gactaagaca ttttctttgg aagatgtaac ttctaaatgg ctgatattgc ctggacttgt
      181 tgaggccgga gttgcagtgg caaataatca ccaaataatc ctgaggctgg gtcaggtaac
      241 acaatacaga aggccagtgg tgtgctgtgt ccctgggata tttgtgaata ttgccaccta
      301 tttcacagct tgcaggtaca agagagggca atatcttcaa tccaaggcaa tgggcaagta
      361 tatttgaaca cagaatgata gccacaagac atctgcctgg gtttggtgtg gtataccaca
      421 gcaaggctac agccatgtag aagaaaacac ctttgaagag gcttagcatg tcatccctca
      481 tgaagaagag gaggaggaag tcttcttcca acaccctgag gaatattgtc agctgcagaa
      541 tttctcacag ttggaaggaa ggtaatgagc ctgtcaccca atggaaggcc atagttctag
      601 atcaactgcc aacaaaccct tctctttact tggtgaagta tgatggaatt gacagcatct
      661 acgtactgga gctctacagt gatgacagga ttttaaacct taaggttttg cctcccatag
      721 tagtatttcc tcaggtgagg gatgcccacc tcgccagagc cctggttggc agagcggtac
      781 aacacaaatt tgagaggaaa gatggctctg aggtcaactg gaggggggtg gtgctagccc
      841 aggtgccaat catgaaggat ttgttttaca ttacctacaa gaaggatcca gctctctatg
      901 cttatcagct cctggatgac tacaaggaag gtaacctcca catgattcca gacactcctc
      961 cggctgagga gagatcagga gatgacagtg atgtgttgat tggtaactgg gtggagtaca
     1021 ccagaaaaga tggttccaaa aagttcggaa aggttgttta ccaagttcta gccaatcctt
     1081 ccgtgtactt tatcaagttt catggtgaca tccatatcta tgtctatact atggtgccaa
     1141 agattcttga agttgaaaaa tcataaagta cagaaacgta aacatatagg actggaagaa
     1201 aaaaaaagtt ttttttttcc tgtgttggct acataagggt ctttgataat cccagtatct
     1261 ttgccaataa aatgtgtttt gttct
//
