LOCUS       XM_036156660            8978 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus slingshot protein phosphatase 2 (Ssh2),
            transcript variant X5, mRNA.
ACCESSION   XM_036156660
VERSION     XM_036156660.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000077.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8978
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="11"
     gene            1..8978
                     /gene="Ssh2"
                     /gene_synonym="mSSH-2L; SSH-2; SSH-2L"
                     /note="slingshot protein phosphatase 2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 mRNAs, 18 ESTs, 1325 long SRA reads, 1 Protein, and
                     99% coverage of the annotated genomic feature by RNAseq
                     alignments, including 10 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:237860"
                     /db_xref="MGI:MGI:2679255"
     CDS             21..4238
                     /gene="Ssh2"
                     /gene_synonym="mSSH-2L; SSH-2; SSH-2L"
                     /codon_start=1
                     /product="protein phosphatase Slingshot homolog 2 isoform
                     X5"
                     /protein_id="XP_036012553.1"
                     /db_xref="GeneID:237860"
                     /db_xref="MGI:MGI:2679255"
                     /translation="MALVTVQRSPTPSTTSSPCASSSYLEDSESAALLCCEYGESEIF
                     SDFNEADSGEEECRSQPRSISESFLTVKGAALFLPRGNGSSTPRVSHRRNKHAGDLQQ
                     HLQAMFILLRPEDNIRLAVRLESTYQNRTRYMVVVSTNGRQDTEESIVLGMDFSSNDR
                     SALQSLHKACEVARMHNYYPGSLFLTWVSYYESHINSDQSSVNEWNAMQDVQSHRPDS
                     PALFTDIPTERERTERLIKTKLREIMMQKDLENITSKEIRTELEMQMVCNLREFKEFI
                     DNEMIVILGQMDSPTQIFEHVFLGSEWNASNLEDLQNRGVRYILNVTREIDNFFPGVF
                     EYHNIRVYDEEATDLLAYWNDTYKFISKAKKHGSKCLVHCKMGVSRSASTVIAYAMKE
                     YGWNLDRAYDYVKERRTVTKPNPSFMRQLEEYQGILLASKQRHNKLWRSHSDSDLSDH
                     HEPICKPGLELNKKEMTTSADQIAEVKTVENLAAMPTVFMEHVVPQDANQKGLHTKER
                     VICLEFSSQEFRAGQIEDELNLNDINGCSSGCCLSESKLPLDNCHASKALLQPGQAPD
                     IANKFPDLAVEDLETDALKADMNVHLLPMEELTSRLKDLPMSPDLESPSPQASCQAAI
                     SDFSTDRIDFFSALEKFVELSQETRSRSFSHSRIEELGGGRSEGCRLSVIEVAASEMA
                     ADDQRSSSLSNTPHASEESSVDEDQSKAITELVSPDIIMQSHSENAISVKEIVTEIES
                     ISQGVGQVQLKGDILSNPCHTPKKSTIHELPLERVPAPESKPGHWEQDESFCSVQPEL
                     ARDSGKCAPEEGCLTTHSSTADLEEEEPVEGEHDWGPGMHSGAKWCPGSVRRATLEFE
                     ERLRQEQENHGTASAGPTLSNRKNSKNDSSVADLMPKWKSDETTPEHSFFLKEAEPSK
                     GKGKCSGSEAGSLSHCERNPTMPDCELLEHHSLPAPQDCLGSDSRSKKQEGDLKKQRA
                     VVPNQECDTQAILLPLPKKIEIIEYTPTVTSLGHTEPGGEATPSKEGEKQGLRKVKME
                     QSITMFCALDENLNRTLEPSQVSLHPQVLPLPHSSSECDRPADPNPMLSSPQDKGDCP
                     STPFKTAAPFVSCSTQGASFSLDYLLPHSVVHLEGCTEQSSATDNELSPEQASWEDSR
                     GHFLSSGSGMAHTSSPLTNEDLSLINKLGDSVGVLQKKLDPSPEACRIPHSSSSENIR
                     DLSHSRGVVKEHAKEIESRVIFQAGFSKTSQMKRSASLAKLGYLDLCKDYLPDRELVS
                     SESPHLKLLQPFLRTDSGMHALMAHEPSESAGAQQNPQPTKYSVEQLKTSECIVQSKP
                     VERPSVQYAKEFGYSQQCLLPKARPELTSSEGGLPLLQTQGLQYTGPSPGLAVAPRQQ
                     HGRTHPLRRLKRANDKKRTTNPFYNTM"
ORIGIN      
        1 aacaacccag cagcacctag atggctttgg tcacggtcca gcggtcgcct acccccagca
       61 ccacctccag cccttgcgcc tcgagctctt atttggaaga cagtgaatca gcagcattac
      121 tttgctgtga atatggagaa tcagaaatct ttagtgattt caatgaggcc gacagtgggg
      181 aggaggaatg ccggtcacag cccagaagca tcagcgagag cttcttaact gtcaaaggtg
      241 ctgccctttt tctaccacga gggaatggct cgtctacacc aagagtcagc cacagacgca
      301 acaagcatgc aggtgatctc caacagcatc ttcaagcaat gttcatatta ctccgcccag
      361 aagacaacat aaggctggct gtaagactgg aaagtactta ccaaaaccga acacgctata
      421 tggtcgtggt ttcaactaat ggtagacaag acactgaaga aagcattgtc ctgggaatgg
      481 atttttcttc taatgacagg tctgcactac agagtttgca caaggcttgt gaagtggcca
      541 gaatgcataa ctactatcca ggcagccttt ttctcacttg ggtgagttat tacgagagcc
      601 atatcaactc agatcagtcc tcagtcaatg agtggaatgc tatgcaggat gtgcagtctc
      661 atcggcctga ctctccagcc ctcttcacag acataccaac tgaacgtgag cgaacagaaa
      721 ggcttattaa gactaaatta agggagatca tgatgcaaaa ggatttggag aatatcacct
      781 ccaaagagat acgcacggag ctggagatgc agatggtgtg caacttgcga gaatttaagg
      841 aattcataga taatgaaatg atcgtgatcc ttggtcagat ggacagtccc acacagatat
      901 ttgagcatgt attcctgggc tcagaatgga atgcctcgaa cttagaggac ttgcagaacc
      961 gaggggtacg gtatatcttg aatgttactc gagagataga taacttcttc cctggagtct
     1021 ttgagtatca taacattcga gtatatgatg aagaagcaac agatctcctg gcttactgga
     1081 atgacactta caaattcatc tctaaagcaa agaaacatgg atctaaatgt cttgtgcact
     1141 gcaaaatggg ggtgagtcgc tcagcctcca ctgtgattgc ctatgcaatg aaggagtatg
     1201 gatggaatct ggatcgagcc tatgactatg tgaaggaaag acgaacggtg accaagccta
     1261 accccagctt catgagacaa ctggaagaat accaagggat cttgctggcc agcaaacagc
     1321 ggcataacaa actctggaga tctcattcag atagtgacct ttcagaccac cacgaaccca
     1381 tctgtaaacc tgggctcgag ctcaacaaga aggagatgac cacgtcagca gaccagatcg
     1441 ctgaggtgaa gactgtggag aaccttgctg ccatgcctac cgtctttatg gaacatgtgg
     1501 tcccacaaga tgcaaatcag aaaggactac acaccaaaga aagagtcatc tgcttggagt
     1561 tttcttcaca agagtttcgt gccggacaga ttgaagatga attaaattta aatgacatca
     1621 atggatgctc atcagggtgt tgtctcagtg aatcaaaact ccctcttgac aactgccatg
     1681 cgtctaaagc cttactccaa cctggacagg ccccagacat tgccaacaag ttcccagact
     1741 tagctgtgga agatctggag acagacgcac tgaaagcaga catgaatgtc cacctactgc
     1801 caatggaaga gttgacatct cgactgaaag acctccccat gtcacctgat ctggagtcac
     1861 caagccccca agccagttgc caagctgcca tctcagattt tagtacagat cgtattgact
     1921 tttttagtgc cctggagaaa tttgtagagc tttctcaaga aacccggtct cggtcttttt
     1981 ctcactcaag gatagaagaa ttaggtggag gaaggagtga gggctgtcgt ttgtcagtga
     2041 tagaagtggc agcttcagaa atggcagctg atgaccagag aagcagctct ttgagtaata
     2101 cgccccacgc ctctgaagag tcttctgtgg atgaggacca gtcgaaggca atcaccgaac
     2161 ttgtcagccc agacatcatc atgcaatctc actcagaaaa tgcaatttca gtcaaagaaa
     2221 ttgtgactga aattgagtcc attagtcaag gagttgggca ggttcagtta aaaggagaca
     2281 tcctctctaa cccatgccac acaccaaaga agagcaccat tcatgagctg cccctggaga
     2341 gggtgccagc ccctgagagc aaacctggac attgggagca ggatgagagt ttctgtagtg
     2401 tccagccaga actagctaga gactcaggga agtgtgcccc ggaggaaggc tgtctgacca
     2461 cacactcatc cacagcagac ttggaagaag aagaaccagt tgagggggaa catgactggg
     2521 gcccagggat gcactctggt gctaagtggt gccctgggtc tgtgaggcga gccaccctgg
     2581 agtttgaaga gcgcttgcga caagagcaag agaaccatgg tacagcctct gcaggcccca
     2641 cattatccaa tcgcaaaaac tctaagaatg attcttctgt ggcagactta atgccaaaat
     2701 ggaaaagtga tgaaactacc ccagaacatt catttttcct caaagaagcc gagccgagca
     2761 agggtaaagg gaaatgcagt ggttctgaag ccggatcact atcccactgt gagcgtaatc
     2821 ccaccatgcc agactgtgag ctgctggagc atcattcctt gccggctcct caggactgcc
     2881 tagggtcaga tagtagaagt aagaagcagg aaggagacct aaagaagcag agggctgtgg
     2941 ttccaaacca ggaatgtgac acacaggcca tccttctccc ccttcccaag aaaatagaaa
     3001 tcattgagta tacgccgaca gttacatcac tgggtcacac cgagccagga ggtgaggcga
     3061 cacccagcaa agagggtgag aaacaaggac tgaggaaagt gaagatggag cagtctatca
     3121 ctatgttttg tgcgctggat gaaaatctga acaggactct ggagcccagt caagtttctc
     3181 tgcatcccca agtgctacct ctgcctcatt cttcctcaga gtgtgacagg cccgctgacc
     3241 caaaccctat gttaagtagc ccgcaagaca aaggggactg cccatccaca cccttcaaga
     3301 cagcagcacc ttttgtcagc tgcagtaccc agggagcatc tttcagcttg gattatttgc
     3361 ttccccactc tgtggttcac ctggaaggct gcacagagca aagcagtgcc actgacaatg
     3421 aactgtctcc agagcaggct agctgggagg acagccgggg gcatttcctc tccagtggta
     3481 gtggaatggc acacacatcc tccccattaa ctaacgaaga cctaagttta attaacaaac
     3541 ttggtgacag tgttggtgtg ttacagaaaa aactggaccc gtcacctgaa gcctgtagaa
     3601 tcccacatag ctctagtagt gaaaatataa gagatctcag ccacagccgt ggtgtggtga
     3661 aggagcatgc taaagaaatt gagtctcgag tgatcttcca ggcagggttt tccaaaacat
     3721 cccaaatgaa gcgctcagct tcccttgcca agttgggtta cctggacctt tgtaaagact
     3781 acttaccaga tagagagctt gtctcctcag aatcccctca tctcaaattg cttcagccct
     3841 tcctcagaac agactcaggc atgcatgcct tgatggccca tgagccctca gaaagcgcag
     3901 gtgcccagca gaacccacag cccaccaagt attctgtaga gcaactcaaa acatcagagt
     3961 gtattgtgca gagcaaacca gtggagaggc ccagtgtgca gtatgccaaa gagtttggtt
     4021 acagtcagca gtgtttgctc cccaaggcaa gaccagaatt gactagttct gaaggaggcc
     4081 ttcctttgct acagacacag ggtctgcagt acacaggccc ctctccaggg ctggctgtgg
     4141 cgccccgtca gcaacatggc agaactcacc cccttagaag actgaaaaga gcaaatgata
     4201 aaaaacggac aaccaacccc ttctataaca ccatgtgatc ctgagcccac acacgtgatt
     4261 ttctaagaaa atgtttgtta aaaaggtggt gtaatatgta aggaacatgc actttattgg
     4321 ttaattttat aatatttttg gtcattttac tgttcctggc tcatgcaggg tttgggtttt
     4381 tccatgtgtg tacgtgcatg tatgtatgtg tgtgtgtatg tgtgtgtgtg tgtgtgtgtg
     4441 cgcgcgcacg cacatgcacg catgctgtat gtatgtatgt atgtgtactg atttggatgg
     4501 caagatcatt ttattatttt tattttttta aaaattcaaa cctcaaaaaa atttttttta
     4561 aaagagcacc tttatcaaag gcaaattgct gtttttcaat caactgccac ctgtctcttc
     4621 tcattttgcc ctctgagaaa agacatgcct gcttcgttga gggaaagaaa cagatggggt
     4681 aggtggcact gaagctggga actggagatg ctcacccagg cctgaggcga cctatctgct
     4741 gaagggcaga gggaagtcac tgctctcagc cttctccaag ctctcttttg gagtctgtga
     4801 agttgtaggc tctgctttgc tttaccaggc agttgagact cccatttctt ctgatattcc
     4861 aaaaggcatc gatcattaca gaaaaaaagg agtggtaatt ggcctattgt gaagcaaata
     4921 attttcccca agaaaacaat ctgaaaaggg aaccctaatc gaaattcaag gtcatctgta
     4981 gagaaatgca ttaagagaga aggtggaaat gcagcccctg cgttgctgtg ggggccagtg
     5041 gactccaccc aggtgaatcc tggcactgcc tgccggatcc ccgtctgccg gatgacatgc
     5101 tctgccacag cctcccaact aaagacctgg aaacaggctt gaaaaacagc aaagtcagtg
     5161 tgttcttgta aaatgaatac atactgtggg gttttaaccc tgttacttga atactctgtg
     5221 ggccttctga gtttaatggc cgtggttttc caattgattt cttctctctt gctgttttcc
     5281 catccttccc ttttcttaat ttcacaaatt atattttgtt acattacata catagaacct
     5341 attaacactt gacacaagtt ttttccccta atttttccta ggtttgtcgt ttctctacag
     5401 ttcatacaca gtatttatgt acataatgtc actttttaaa tgtttcatgg ttgatattgt
     5461 gggtcttttg atttattctt gttaaggagt agagttgcaa ctggaaaaga aagagacacc
     5521 agaaataaac tggtagtttc tggtagaaat ctttatttgt tttaaatgaa aacttgtcat
     5581 tgccagctcc tgccaaatta agtacttcct cttaagaaac ccctgcaggc tcccactaga
     5641 tcacactgaa cgctggcttc tgtttgaggc tgaagtccca gatcactgtt tgccagtaat
     5701 tgaagcgcag ccagatatgt gtcttcgctg cccaaactag tagactcccc gtgtgcggct
     5761 gagaggctgg ggcagctcag ccaagagcac agatcccact taggatacca ttgctttgtt
     5821 gctggcctgc tgctcttaaa cactggccta tctactgcaa atatgcctct gagaatagta
     5881 cagaaaacat ctggagataa ccaacacagc tcagcaaaac tgaagaggtc tacaaatttg
     5941 cttcctgctt gcttttgttg atgtcggaat tgctgaggat tgtctgagta ggagccaggg
     6001 acttaggttt ttgattcatc atagccctag ttagaaataa acagacacac agattaatta
     6061 tcattagagg cagactttgg agggagcagg tagtaggata caggagaagt agactgcagc
     6121 cattttcaag tgctccagag ctgggagtcc acttgccatt aaaaaaaaaa aaaaaaaaaa
     6181 aaaaagtggt tggttctgac attactgcca ggaagcagtt agcgaccacc tgcggaaata
     6241 tgtggtatag aagttatata tacctgtgct gtctttcggt agtttcttta aatgttacat
     6301 ctttgtgcat cttggatatt tgtgtgttgt ctcgttaggt ggtatgtttc attgtgagga
     6361 aggcttggga ggcaagatgg tggattccag gacccatctg ctaaagaatc ctgtctacca
     6421 gtgtgacgga aggacgagaa gttatgatag ggtgaggagt gtttacatca aggttgagag
     6481 agtgcatcac caaaaataat aataaaagct gggtgtagtg gctcacatct gtagtcccag
     6541 cacttgggag gctgaggcag gaggatcact atgagctgga cgctaacttc ggctaaagag
     6601 tgagaccctg tctcaaaaaa agtagcatcc atatgccaca cattatcacc aatggacact
     6661 gctctctcat ctcccggtgt agaatatcct cactgcatct ctcttagcag agactgagaa
     6721 aatgcccaat gagggcactg gggagcggac ggacaaatga caacacctga ttttgttttc
     6781 aagatttaaa gaatggaaga aaccatcttc tgctgtcttc cttcttaatt gtatttccta
     6841 tcatttaact cacctgccta ggtatcttcc acacagggtc tataattcag ctatgccaaa
     6901 gggtcttgcc agccctccaa accccaacac ttgggttgtt cctaagtcat gcttatggct
     6961 aaggcaggtg cataataagc tgttgaagac tttttacttt agcatttgat aatttcagat
     7021 tgtctgtctg tttttttttc tgttcatgga aagcctggac ctaactctga cgaactgtta
     7081 agcaggaaaa atcttgacct cctgactagt gcttaacctc ttgctcaatg cctctgtctc
     7141 tctttactgt ttttaagacc acagtagtcc tgtcagtagg tctggaaaag tgtataagca
     7201 tacatgtggg cacttagaca gaggagctga catttcagtg cctgggctaa cagccccagg
     7261 agcaggcagg attggagcta cagcctgact acattgagct atacctgact atagggagag
     7321 gaccctagcc ctttgttgtt tttggaaaca gcagcagtgg gtggtgtggg cacagtatag
     7381 tagggagcac ttcatctcag tttagttgcc tcttgttctt cttaacatat tcgttcctgt
     7441 tcctgcatcc ccacctcttc agcatcttag tgttttcctg ctctgtacct ttgtctctac
     7501 tgctatttcc ttctttctca ttctgagaac taccaagagc tccagggaca gcctggggac
     7561 acatcccagg ttccaaggtc tcctgctcct gagcccagat gtttcctctg aaggcctctg
     7621 acagtggctc acaggattct gcacctgagg ttctctttca gtaaagatgt tctgtgggag
     7681 ttgggttttt tggggttttt tgtttttgtt tttttctaag cattatgcaa aaagttttaa
     7741 gggcatttta aagaaaagcc agtttttctt ggcttttcca aacaactatc tgtggatact
     7801 ttgtttactt tgtgagtatt aaaatatgca tcatcgctgt ggcctcaggc tctgaagcca
     7861 tggttgtcct atgagtcctc ccccagagaa aatgccatat tattgtcagc ccttgtggat
     7921 aagtgggtca gctgtggagc cgatctcctt ctgtgtcctg cactcgcatc cagcagtcct
     7981 ttcttagtgc tgatgtgtct ccatagtgat ggtcgtgatg gtgaatggat agtatgattg
     8041 tttggttttt gatttttaac ggtagacaag gtgacattcc gttgtttcag caccaatcca
     8101 acttaaaaga tcatagactt cgttatccct tccaaactaa aagatcaagc atgtattgga
     8161 cataagtgta tgcgttgcct cgactcatct ggcacccata ttaggaaaag gcctgccacc
     8221 aaagcaggaa gctgcacgct gctctcccca gggctttggg acctcttgat gccatgaaga
     8281 gctattgcaa ggtgcttctg tactgctcca gcctgaagca gaggtgacta ggcctgcttc
     8341 tgctaggaag agaaccagcc tcatctcagt gccccagaga tctaggacag gatttctaaa
     8401 ctggaatcac ctcttaccaa cttgaagagc cccaccccac cccaggtata gggctggtgc
     8461 tgccatcggc cttcacagcg aagctggtgg cagcatcctg tctacagaga gcaaataccc
     8521 caaatggaaa gctgagaaac tgacatgtgt cctagtcagt aagcccactg ggaaatgatg
     8581 ggttttgttt tatttgattg atttgcttgg cgtagcaaag gtgcctttcc caccctcctc
     8641 cctttaaact ttgttttgta agacttgttt gaaacccaaa caagtccaaa agactcgcac
     8701 tgactgttac ctttgtccag gctatcccaa acttctctat gctctcattt tattaaaagc
     8761 aggtgctccc tggaatctct gggacctttc tgaggcattc aaagcagaat ataaagagtg
     8821 gtctcatctc cttccttaat cctggtggtt gggatgtccc acttgtatca tagttgtttt
     8881 tattattact gatgtgctcc gctgttttta aatgtgaact tgtgcgcaga ttcaatgttc
     8941 ttgttacaga ttgaataaat ttttattttg aagacaaa
//
