LOCUS       NM_026794                588 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Mus musculus SS18, nBAF chromatin remodeling complex subunit like 2
            (Ss18l2), mRNA.
ACCESSION   NM_026794
VERSION     NM_026794.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 588)
  AUTHORS   Narayanan,R., Pirouz,M., Kerimoglu,C., Pham,L., Wagener,R.J.,
            Kiszka,K.A., Rosenbusch,J., Seong,R.H., Kessel,M., Fischer,A.,
            Stoykova,A., Staiger,J.F. and Tuoc,T.
  TITLE     Loss of BAF (mSWI/SNF) Complexes Causes Global Transcriptional and
            Chromatin State Changes in Forebrain Development
  JOURNAL   Cell Rep 13 (9), 1842-1854 (2015)
   PUBMED   26655900
REFERENCE   2  (bases 1 to 588)
  AUTHORS   Francia,G., Mitchell,S.D., Moss,S.E., Hanby,A.M., Marshall,J.F. and
            Hart,I.R.
  TITLE     Identification by differential display of annexin-VI, a gene
            differentially expressed during melanoma progression
  JOURNAL   Cancer Res 56 (17), 3855-3858 (1996)
   PUBMED   8752144
REFERENCE   3  (bases 1 to 588)
  AUTHORS   Tehrani,M.A., Mumby,M.C. and Kamibayashi,C.
  TITLE     Identification of a novel protein phosphatase 2A regulatory subunit
            highly expressed in muscle
  JOURNAL   J Biol Chem 271 (9), 5164-5170 (1996)
   PUBMED   8617797
REFERENCE   4  (bases 1 to 588)
  AUTHORS   Takahashi,M., Yoshida,M.C., Satoh,H., Hilgers,J., Yaoita,Y. and
            Honjo,T.
  TITLE     Chromosomal mapping of the mouse IL-4 and human IL-5 genes
  JOURNAL   Genomics 4 (1), 47-52 (1989)
   PUBMED   2563351
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC027548.1.
            
            On Jun 19, 2003 this sequence version replaced NM_026794.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC027548.1, EH099453.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..588
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="9"
                     /map="9 72.56 cM"
     gene            1..588
                     /gene="Ss18l2"
                     /gene_synonym="1110020I04Rik; Deb1"
                     /note="SS18, nBAF chromatin remodeling complex subunit
                     like 2"
                     /db_xref="GeneID:26901"
                     /db_xref="MGI:MGI:1349474"
     exon            1..83
                     /gene="Ss18l2"
                     /gene_synonym="1110020I04Rik; Deb1"
                     /inference="alignment:Splign:2.1.0"
     exon            84..160
                     /gene="Ss18l2"
                     /gene_synonym="1110020I04Rik; Deb1"
                     /inference="alignment:Splign:2.1.0"
     exon            161..517
                     /gene="Ss18l2"
                     /gene_synonym="1110020I04Rik; Deb1"
                     /inference="alignment:Splign:2.1.0"
     regulatory      497..502
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Ss18l2"
                     /gene_synonym="1110020I04Rik; Deb1"
                     /note="hexamer: AATAAA"
     polyA_site      517
                     /gene="Ss18l2"
                     /gene_synonym="1110020I04Rik; Deb1"
                     /note="major polyA site"
ORIGIN      
        1 tttttttttg cagcatgtct gtcatcttcg ctcctgactg gctacgcggc aaagccaagg
       61 tcaatcaaga gacaatccag cggctcctgg aggagaatga ccagctgatc cgctgtatcg
      121 tggagtatca gaataagggc cgagcgaacg agtgcgtcca gtatcagcat gtgttacata
      181 gaaatctcat ttatttagct accatcgcag acgccaacac aagcagtctc acaaaggcag
      241 tggagtagtt ttccagaagg ctgtaatgag gactgattgg aacccatctc ctgggaatca
      301 gagagctgct cagaacatgg gcaaaaagtc ccattcattt tagactgtga agaaactcgc
      361 taccaactct actgtattct gactataaat atttattaat aaaacagatc ccacggtaga
      421 acctgaggac ctgcgaggac ctgaggtgta tgacagcggt gtcattgtca acaatagtga
      481 ttatctgatg acatgtaata aatgatacac gtccgtcaaa aaaaaaaaaa aaaaaaaaaa
      541 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//
