LOCUS       NM_021403               3970 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Mus musculus serine/arginine repetitive matrix 3 (Srrm3),
            transcript variant 2, mRNA.
ACCESSION   NM_021403
VERSION     NM_021403.3
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3970)
  AUTHORS   Nakano,Y., Wiechert,S., Fritzsch,B. and Banfi,B.
  TITLE     Inhibition of a transcriptional repressor rescues hearing in a
            splicing factor-deficient mouse
  JOURNAL   Life Sci Alliance 3 (12), e202000841 (2020)
   PUBMED   33087486
  REMARK    GeneRIF: Inhibition of a transcriptional repressor rescues hearing
            in a splicing factor-deficient mouse.
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3970)
  AUTHORS   Nakano,Y., Wiechert,S. and Banfi,B.
  TITLE     Overlapping Activities of Two Neuronal Splicing Factors Switch the
            GABA Effect from Excitatory to Inhibitory by Regulating REST
  JOURNAL   Cell Rep 27 (3), 860-871 (2019)
   PUBMED   30995482
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC058385.1 and BC051947.1.
            
            On Oct 30, 2007 this sequence version replaced NM_021403.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC051947.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164131, SAMN01164132
                                           [ECO:0000348]
            ##Evidence-Data-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-396               BC058385.1         1-396
            397-3970            BC051947.1         4-3577
FEATURES             Location/Qualifiers
     source          1..3970
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="5"
                     /map="5 75.42 cM"
     gene            1..3970
                     /gene="Srrm3"
                     /gene_synonym="2900083I11Rik; SRm300-like; Srrm2l"
                     /note="serine/arginine repetitive matrix 3"
                     /db_xref="GeneID:58212"
                     /db_xref="MGI:MGI:1920309"
     exon            1..511
                     /gene="Srrm3"
                     /gene_synonym="2900083I11Rik; SRm300-like; Srrm2l"
                     /inference="alignment:Splign:2.1.0"
     exon            512..754
                     /gene="Srrm3"
                     /gene_synonym="2900083I11Rik; SRm300-like; Srrm2l"
                     /inference="alignment:Splign:2.1.0"
     exon            755..856
                     /gene="Srrm3"
                     /gene_synonym="2900083I11Rik; SRm300-like; Srrm2l"
                     /inference="alignment:Splign:2.1.0"
     exon            857..985
                     /gene="Srrm3"
                     /gene_synonym="2900083I11Rik; SRm300-like; Srrm2l"
                     /inference="alignment:Splign:2.1.0"
     exon            986..1066
                     /gene="Srrm3"
                     /gene_synonym="2900083I11Rik; SRm300-like; Srrm2l"
                     /inference="alignment:Splign:2.1.0"
     exon            1067..1096
                     /gene="Srrm3"
                     /gene_synonym="2900083I11Rik; SRm300-like; Srrm2l"
                     /inference="alignment:Splign:2.1.0"
     exon            1097..1159
                     /gene="Srrm3"
                     /gene_synonym="2900083I11Rik; SRm300-like; Srrm2l"
                     /inference="alignment:Splign:2.1.0"
     exon            1160..1195
                     /gene="Srrm3"
                     /gene_synonym="2900083I11Rik; SRm300-like; Srrm2l"
                     /inference="alignment:Splign:2.1.0"
     exon            1196..1246
                     /gene="Srrm3"
                     /gene_synonym="2900083I11Rik; SRm300-like; Srrm2l"
                     /inference="alignment:Splign:2.1.0"
     exon            1247..1351
                     /gene="Srrm3"
                     /gene_synonym="2900083I11Rik; SRm300-like; Srrm2l"
                     /inference="alignment:Splign:2.1.0"
     exon            1352..1529
                     /gene="Srrm3"
                     /gene_synonym="2900083I11Rik; SRm300-like; Srrm2l"
                     /inference="alignment:Splign:2.1.0"
     exon            1530..1876
                     /gene="Srrm3"
                     /gene_synonym="2900083I11Rik; SRm300-like; Srrm2l"
                     /inference="alignment:Splign:2.1.0"
     exon            1877..2101
                     /gene="Srrm3"
                     /gene_synonym="2900083I11Rik; SRm300-like; Srrm2l"
                     /inference="alignment:Splign:2.1.0"
     exon            2102..2239
                     /gene="Srrm3"
                     /gene_synonym="2900083I11Rik; SRm300-like; Srrm2l"
                     /inference="alignment:Splign:2.1.0"
     exon            2240..3932
                     /gene="Srrm3"
                     /gene_synonym="2900083I11Rik; SRm300-like; Srrm2l"
                     /inference="alignment:Splign:2.1.0"
     regulatory      3909..3914
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Srrm3"
                     /gene_synonym="2900083I11Rik; SRm300-like; Srrm2l"
                     /note="hexamer: AATAAA"
     polyA_site      3932
                     /gene="Srrm3"
                     /gene_synonym="2900083I11Rik; SRm300-like; Srrm2l"
                     /note="major polyA site"
ORIGIN      
        1 ctccccaggc caacctggtg ccttgacttg actcagaagt ttcataatcg atgccatact
       61 cagtcccatg ctggacattg gataaaagaa gatttagaac catgatggca ctgaagccct
      121 cctcagcagg aagctcgctt aaaatccccc agagagaggc tgggcatagc tggctggaag
      181 gatgcttgct tgtctagcct gcacccaggc gggaggcaca ccaacaccgc aaatacaaag
      241 tatccttttt gcctagactt ggtaatgttt ctgcaggcca tgtggcttag atgcttagct
      301 tgtctgaaag tgggccaggg ctctggtgca aaattggggt gcctggcagg gggactttag
      361 agccagcatc ccagatggac ctcacaaaat ccatgcaggt ctgccagaac gaagctcact
      421 cctgaaggag gaagagaact gaagaaaaac cagggccaag gaaattggga ctcaggaaga
      481 gacacaaggc agcctgtggg gactttgcca ggacctgtgt catgtcctcc accgtgaaca
      541 acggggctac cggcatgcca gctccaccgg atgctgctaa tggcttcccg cagcccggcg
      601 cctcgtccgg gtcttggccg cgcgcggagg aggagctgcg cgccgccgag cccggcttgg
      661 tgaagcgcgc gcaccgggag atcctggacc acgaacgcaa gcggcgcgtg gagctcaagt
      721 gcatggagtt gcaggagatg atggaggagc aggggtactc agaggaggag atccggcaga
      781 aggtcgggac cttccggcag atgctgatgg agaaggaagg cgtactgacc cgggaggacc
      841 ggcctggggc ccacatcgtg gcagagaccc cgcgacgaat ggagggcttg gagccgggcc
      901 tggagtaccc acccttcgat gaggacgacg gcccggtgga ttgcgactgc ccggtctcct
      961 gctaccgcgg gcaccggggg tacaggacca agcactggtc cagcagctct gcatcgcccc
     1021 ctcccaagaa gaagaagaaa aagaaaggca gtcatcggag gagccgcaaa aagaggagac
     1081 tagagtcaga atgcagctgt gggagtgctt cccccctgcg caagaagaag aagaatgtga
     1141 agaaacaccg tcgagatcgg tctgattctg ggtcccggag gaagagacga tacagatcga
     1201 gaagcctcaa gagcaaacga aaagaaaaaa acaaagagcg aaagaggcct cacactgagt
     1261 ctccaggccg aaggttccac caccacagca gcgccagctc ccacagcccc tcaatgtcct
     1321 cacactacag tgattctgga tcacccagca gactgagccc caagcatcga gatgacgggc
     1381 ggaagacagg cagccagcga tccagcggga gccggtcgcc atccccatcg ggcggcagcg
     1441 gatgggggtc gccccagcag aacggaggca gcaggcagcg aagcggagcg cacgggggtc
     1501 gccccggctc ggcgcacagc ccgcccgata agcccagctc gccccgggcc tgcgacaagg
     1561 cggccgccgc gcccacgcct cccgcgcgtg ggaaggacag ccagagtccc cgctccgcgc
     1621 cgtcgtcgca gggccgcggg ggccgcgcgg cgggagggac agccaggcgc cggcgtcggc
     1681 gacggaggag gagacgatcg cggtcctcgg ccaacgcgcc ccgccgcagg ggacgccggc
     1741 gtacaaagcc cgcgccgcct cggggctcgt cgcgctcgct cagcggggca cactccagca
     1801 gcgactccgg tggcggcgcc ccgggccccg ggcccgagcc ctgctccgag cgaggtcacg
     1861 gcggacacgg gaaacgggca aaggagcgcc ccccgcgcgc acgcccggct agcacctcgc
     1921 catcgcctgg cacgcgcggc cgacggggcg gcccagaggg caacagctca tcgcgcagcc
     1981 cgggtcccca tcagggctcc tggagctcca gccgctcgcc ctccaaatcc cactcgcgct
     2041 ccccagacaa aaggacccgc agccccagcc tctcaccgtc gcccaagaaa cctcttggca
     2101 gggacaagga cagcgaaggc cgtgcgaggc acgccgaggc tgaggccgcc cgcacccggc
     2161 gtcgctcccg cagctactcg cccatccgaa agcggcgccg ggactcgccc agtttcatgg
     2221 agccgagacg catcaccagt gcccgcaagc gtcccatccc ctactaccgg cccagcccct
     2281 cctcttcctc cagctgcttg agcaccgact actcaagccg gagccacagc cggagcccca
     2341 gccctggcca cagccatgga agctacagca gccgcagtca cgggactcgc agccgctcct
     2401 gcagcgcctc caggagccgc agtcctagct accacagccg gagcagctct gagagtgggg
     2461 gcttctaagc ccagacggac ccatctaggg ttggaaggcc ctggaacaag gagaggctgg
     2521 ggccctgaga cctgggaaag aggggtctgt aaccccatac tgctacagag gtcccggggt
     2581 gggggtgggg cagcacgtgg gcaagtggga ctacagaaga gcgtcttcta gggtgggtga
     2641 accacccacg acacgaggag gaatcaaact gtcctgcccc tgaggtgtgc ccatccccac
     2701 gccctgccca cccaccatgc ccagggaaca aagagccttt gcgaacacag ggatcagatc
     2761 accacacccc tcttctgctt gaggccagct taccagcctg gggcccattg cctgtgtatg
     2821 gcacaagagt ccacaagagt tggctgtcac ctcacctgag ctcagtggac acccccaccc
     2881 ccaccccaca cagctcggaa ggtgccaagc tgggaccttc ccctcctctt tctttatctc
     2941 ccacggggtg gatctaaaaa tggcaaagtg agccagatct aagagagaag gaaggaccac
     3001 ctaactcctg gggtaatgac aagcagaatg agaagttcac actcggccca tctctctccc
     3061 tcgccttcac atcaaggcca cgccccccag gccttcatca gcacaagagg tggcatatac
     3121 cacatctgta tctaacacgg aagttaaagg tcagcagctg aggccctatc tcagttggta
     3181 gaatgcttgc ctagcatgcg tgaagtcctg ggttccatcc caaacaaagc ataaaaccga
     3241 gcatgctagt gcatgcctgt aatcccagca ccctggaggt cgaggcagga ggaccggaag
     3301 ttcaaggtca tcttaggcta catagtgagt tcgaatccaa cctggggtac aggagaatct
     3361 gtctcaaaag tgagagactg ggaattcagg ccagaagata agaaaaaaca cgggtagaaa
     3421 gcagcggcat tttttttttt taaagcatgg gcccaaacaa ggcagtcaga tgaccaaaca
     3481 ggtcaagggc tactgggaga caggtacagg ctgctgtctg ggttatgggc caaatgatag
     3541 ctcacggtca caagctaact aacacgcggt gcacttcgga gcctgcccga gggaggcctc
     3601 cttaccaggc tttgatgggg caggtttggt caaggctttc agaactggga tggtaggttc
     3661 cagccaaagc cctcaccctg gaacacgacc gggatgaggc ggtcccccct ccagccctct
     3721 tctgcggcac ccagccccac ccacccccct gctggggccc tcagggatct cgaagtcttc
     3781 cttggcccaa tagggcagat gccctgggct ctggtggggg gaggagtctg gggtctgaac
     3841 cgggttccca ccttctctca gtttcccctt ccctctttct ccgcagtgcg ggaaaacatt
     3901 tggactgtaa taaaaaacac taggtgcccg ggaaaaaaaa aaaaaaaaaa aaaaaaaaaa
     3961 aaaaaaaaaa
//
