LOCUS       NM_009273                790 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Mus musculus signal recognition particle 14 (Srp14), mRNA.
ACCESSION   NM_009273
VERSION     NM_009273.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 790)
  AUTHORS   Bedogni,F. and Hevner,R.F.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 790)
  AUTHORS   Tang,F., Barbacioru,C., Nordman,E., Bao,S., Lee,C., Wang,X.,
            Tuch,B.B., Heard,E., Lao,K. and Surani,M.A.
  TITLE     Deterministic and stochastic allele specific gene expression in
            single mouse blastomeres
  JOURNAL   PLoS One 6 (6), e21208 (2011)
   PUBMED   21731673
REFERENCE   3  (bases 1 to 790)
  AUTHORS   Birse,D.E., Kapp,U., Strub,K., Cusack,S. and Aberg,A.
  TITLE     The crystal structure of the signal recognition particle Alu RNA
            binding heterodimer, SRP9/14
  JOURNAL   EMBO J 16 (13), 3757-3766 (1997)
   PUBMED   9233785
REFERENCE   4  (bases 1 to 790)
  AUTHORS   Strub,K. and Walter,P.
  TITLE     Isolation of a cDNA clone of the 14-kDa subunit of the signal
            recognition particle by cross-hybridization of differently primed
            polymerase chain reactions
  JOURNAL   Proc Natl Acad Sci U S A 86 (24), 9747-9751 (1989)
   PUBMED   2557625
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BB848168.1, AK019310.1, CD774307.1 and AV338114.1.
            
            On Apr 1, 2006 this sequence version replaced NM_009273.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: DV046933.1, DV042225.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849380, SAMN00849384
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-20                BB848168.1         17-36
            21-537              AK019310.1         4-520
            538-783             CD774307.1         18-263              c
            784-790             AV338114.1         298-304
FEATURES             Location/Qualifiers
     source          1..790
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 59.4 cM"
     gene            1..790
                     /gene="Srp14"
                     /gene_synonym="14kDa"
                     /note="signal recognition particle 14"
                     /db_xref="GeneID:20813"
                     /db_xref="MGI:MGI:107169"
     exon            1..106
                     /gene="Srp14"
                     /gene_synonym="14kDa"
                     /inference="alignment:Splign:2.1.0"
     CDS             83..415
                     /gene="Srp14"
                     /gene_synonym="14kDa"
                     /note="homologous Alu RNA-binding protein; (homologous Alu
                     RNA binding protein)"
                     /codon_start=1
                     /product="signal recognition particle 14 kDa protein"
                     /protein_id="NP_033299.1"
                     /db_xref="CCDS:CCDS16577.1"
                     /db_xref="GeneID:20813"
                     /db_xref="MGI:MGI:107169"
                     /translation="MVLLESEQFLTELTRLFQKCRSSGSVFITLKKYDGRTKPIPRKS
                     SVEGLEPAENKCLLRATDGKRKISTVVSSKEVNKFQMAYSNLLRANMDGLKKRDKKNK
                     SKKSKPAQ"
     exon            107..179
                     /gene="Srp14"
                     /gene_synonym="14kDa"
                     /inference="alignment:Splign:2.1.0"
     exon            180..292
                     /gene="Srp14"
                     /gene_synonym="14kDa"
                     /inference="alignment:Splign:2.1.0"
     exon            293..325
                     /gene="Srp14"
                     /gene_synonym="14kDa"
                     /inference="alignment:Splign:2.1.0"
     exon            326..790
                     /gene="Srp14"
                     /gene_synonym="14kDa"
                     /inference="alignment:Splign:2.1.0"
     regulatory      763..768
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Srp14"
                     /gene_synonym="14kDa"
                     /note="hexamer: ATTAAA"
     polyA_site      783
                     /gene="Srp14"
                     /gene_synonym="14kDa"
                     /note="major polyA site"
ORIGIN      
        1 aagtcccgcc cagcgcgagc gagttttccg gctgtaaccg ctggaggctt ctgctgacgg
       61 cgtcggacct gcggagccca ggatggtgtt gctcgagagc gagcagttcc tgacggagct
      121 gaccaggctc ttccagaagt gccgctcgtc gggcagcgtg ttcatcaccc tcaagaaata
      181 tgacggtcgc accaaaccta tcccgaggaa gagttctgtg gagggcctcg agcccgcaga
      241 aaacaagtgt ctgttgagag ccacggatgg gaaaaggaag atcagcaccg tggtgagctc
      301 caaagaagtg aacaagtttc agatggccta ttcaaatcta ctgagagcca acatggacgg
      361 gctgaagaag agggacaaga agaacaagag taagaagagc aaaccagcac agtgacaggc
      421 gtggctgcta ccaaccagct gcacaagtgc atttttcctc tgtttgctgc tttcagcacc
      481 tctgtatgta actgtttcca cggaagggtc ctttaagaga gaaggactgg gatgggcttg
      541 ggctagttgt ggtaagacgc cagtttttga tttgtgctgt gtggctggat attcttagat
      601 tccagccgta aggtttctag tcatctttga ggagctatgc atcattaatc tccaggctag
      661 ctgctttttt tcctacccta tttatgacag taactactaa ctctagatgg tacagttact
      721 caagtgattt ttaccttgtc atgagattac tgtaatagtt ttattaaaag ttgtgttatc
      781 ctacaggtgg
//
