LOCUS       XM_036162680            2587 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus speckle-type BTB/POZ protein-like (Spopl),
            transcript variant X5, mRNA.
ACCESSION   XM_036162680
VERSION     XM_036162680.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000068.8) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2587
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="2"
     gene            1..2587
                     /gene="Spopl"
                     /gene_synonym="4921517N04Rik; E430033K04Rik"
                     /note="speckle-type BTB/POZ protein-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 mRNAs, 5 ESTs, 88 long SRA reads, and 100% coverage
                     of the annotated genomic feature by RNAseq alignments,
                     including 18 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:76857"
                     /db_xref="MGI:MGI:1924107"
     CDS             302..1378
                     /gene="Spopl"
                     /gene_synonym="4921517N04Rik; E430033K04Rik"
                     /codon_start=1
                     /product="speckle-type POZ protein-like isoform X4"
                     /protein_id="XP_036018573.1"
                     /db_xref="GeneID:76857"
                     /db_xref="MGI:MGI:1924107"
                     /translation="MWTINNFSFCREEMGEVLKSSTFSSGPNDKMKWCLRVNPKGLDD
                     ESKDYLSLYLLLVSCPKSEVRAKFKFSLLNDKREETKAMESQRAYRFVQGKDWGFKKF
                     IRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNVSGHTSTNTLKVPECRLAEDLGNLW
                     ENTRFTDCCFFVRGKEFKAHKSVLAARSPVFNAMFEHEMEECTKNRVEINDLDPEVFK
                     EMMRFVYTGKAPNLDKMADNLLAAADKYALERLKVMCEEALCSNLSVENVADTLVLAD
                     LHSAEQLKAQAIDFINRCSVLRQLGCKDGKNWNNNQATDIMETSGWKSMIQSHPHLVA
                     EAFRALASSQCPQFGIPRKRLKQS"
ORIGIN      
        1 agcaggaaaa gctacttggc gcacgcgccc tgatgactgg cggggcggaa actggacgcc
       61 cgagcctcaa cacctagagc gggctcgggc taggcgcact ctttggcggc gggtgtgttt
      121 aatcttgggg aagaagttta gcagccggtg aggacaagga gggaggccgg gaggaggatg
      181 cggcttggcc ggggggtgcc cgctgcagga gctcgccgcc gcctcagcct cggtccccgg
      241 ggccgccgag ggcccgcccg ccgccccgcg tgtccgggtt aaagtagtga aattttccta
      301 catgtggact attaataact tcagtttttg tagagaagaa atgggtgaag tgttaaagag
      361 ttcaacgttt tcttcaggcc caaatgataa aatgaaatgg tgcctgaggg taaacccaaa
      421 gggattagat gacgaaagta aagactattt gtccttatat ttgctcctag tcagctgccc
      481 aaaaagtgag gttcgagcta aattcaaatt ctctcttctc aatgataaaa gggaagaaac
      541 aaaagcaatg gaaagccaaa gagcatatcg atttgtacag gggaaggact ggggatttaa
      601 aaaattcatt agaagggatt ttttgcttga tgaagctaat ggtctccttc cagatgacaa
      661 gcttacgtta ttctgtgagg tgagtgtggt ccaagattca gtaaatgtat caggacacac
      721 tagtacaaac actttgaagg tgccagaatg tcgactagca gaagatttag gtaatctctg
      781 ggaaaacaca agatttacag attgctgctt ttttgtgaga ggaaaagaat tcaaagctca
      841 taagtctgtg cttgcagctc gatccccagt ttttaatgca atgtttgaac atgaaatgga
      901 agaatgcaca aagaatcgag tggaaataaa tgatttagac cctgaggtat ttaaagaaat
      961 gatgagattt gtttacacag gaaaagcacc aaatcttgat aaaatggctg acaacttgtt
     1021 ggcagctgca gacaaatatg cactggaacg gctgaaggtc atgtgtgaag aagctttgtg
     1081 tagtaacctc tcagtagaaa atgttgctga tacccttgtc cttgcagatt tgcacagtgc
     1141 agaacagttg aaagcccagg caatagactt tattaatagg tgcagtgttc ttcgacaact
     1201 tgggtgtaag gatgggaaaa actggaacaa caaccaagca actgacataa tggaaacatc
     1261 ggggtggaag tccatgattc agtctcatcc ccatttagtg gcagaagcgt tccgagcact
     1321 agcatcttca cagtgtccac agtttggtat tccacgcaaa aggttaaagc agtcttgagt
     1381 cttgtgtgga cagtaggaaa tgcatttgcc tttcctcccc aggtcccgaa ggattccaat
     1441 acaaaccata agtaacagcc gcttctgtct ctcgtccacg gacagaagct ggaaaggcat
     1501 tgcttgcttt cacatggata attcatggtt tatacttcag ctttaaatct gactgattga
     1561 ttcacttcaa ggccttaaat tgtcttcagt gacttctctt gttcatagaa tagtttaatt
     1621 ttttttattg tgccttgtca gtttgccaag gctctgcagg attgcactag ctccacaatg
     1681 cagtaatatt gataactgat aatactgagt ttcaaaggat cttccattat tttagaaaca
     1741 aaagtatttt ataggttttg ttctgtatga tctccaagta taaaactagg ttctattgga
     1801 ttttgagatt gccacaggca tgtccaatct cagttgtgta gacactaaag agcccgttgc
     1861 catccaggta agtgatggcc atacactgct ctggtttaag ttatttttca tttcaaggag
     1921 cagataagca atgagttgac ctaaaatctt agtaatattt gtttagtaat atgtgtttgt
     1981 ctgtatatta actgctcaag aactggtttt atgcacattt gtaaagattg aaaaataata
     2041 tgaagttaag atttcaataa aaagaaagca tggtttttgt taatgtttta aatttataat
     2101 gacttacatt tgaaagaaaa attcaataga tgttaaagtc aggatgacca agtacatgta
     2161 atgaatgagt gggccgatta agcaagatat atgtgcactt ttaatgtgga aattttctat
     2221 gataaatggt acatatatat tttccttttt cgtggattaa taagatttaa attatgtttt
     2281 aacatttaaa agaagttttt atgacacatg gagccaattt ggatattcat gataatagat
     2341 aaaattacac ttgattttag attcattgac ttggatttca aatatttatc attgagttta
     2401 ttatagtttt attacatttg gggaaggcac ctaacaaatt agtcctatat agtcctattc
     2461 tctacataaa gacggagcat gttagtggaa aaacgggtgt atatgcttgt attttgcgaa
     2521 tatagcttta ttccctgtat taaaatttgt gtaatttgtt tattataaaa ttcaggaaaa
     2581 aaagtaa
//
