LOCUS       XM_017320505            3200 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus SPOC domain containing 1 (Spocd1), mRNA.
ACCESSION   XM_017320505
VERSION     XM_017320505.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000070.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3200
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="4"
     gene            1..3200
                     /gene="Spocd1"
                     /note="SPOC domain containing 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 EST,
                     3 long SRA reads, 3 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     1 sample with support for all annotated introns"
                     /db_xref="GeneID:622480"
                     /db_xref="MGI:MGI:3652045"
     CDS             31..3078
                     /gene="Spocd1"
                     /codon_start=1
                     /product="SPOC domain-containing protein 1"
                     /protein_id="XP_017175994.1"
                     /db_xref="GeneID:622480"
                     /db_xref="MGI:MGI:3652045"
                     /translation="MPVDKFLARAGGQRTLSRFQDSLCDFLATGSSRSLCGTSLDFPD
                     RVLVCTEGPAGMEEASSPSFRQATTVEGMVSPEDPTLSKEGLSAKGPPPSPVLPPFRR
                     KCRKCGICPQEEEKSGFSLRFGQRPDGDPPECASPEAFAGPPRLLSSKDTEPGEPGGS
                     WVECAVETEVENMLFSKDGVAPDSLDHLFEFPGLFGGEPLSLVTQEPLQSPALYPEVL
                     TEDSTDQQEVQPAFVVGSPGTPPDPVGPEDKAQSGSRMELEQGLSAPANSCASSPEPL
                     GGLDGAPLEQRRPTHVKKRPWTSPDDSSQDHAEGASKKDFPRLEARVPRGVKTVYYVY
                     TGSGIRLVGAASSSQPGQIEPLEELDTNSARRKRRPTTAHPTPCQSDPSETENAEPHQ
                     QRAEDPGEQGMTPLDAGVRSTVVRAMQEVLWTRAQELPDLALREDEVEAIAEGIEEAL
                     FHLTQDTNLRYKNKYRSLLFNLRDPRNVDLFLKVAHCDVTPNNLVQMSSIQLAPKELS
                     RWRDQEERKGLDIIEQQQKELYRLPASKLTHKGEVEIPRDLDQMLTLEDLMEPIVPRE
                     CSLQPLSTPLEDTTNWHQHHQCDSNCQICTGGEEGRKADDGSQPELQVDISYNVDRKS
                     STKLPAFSGVIMNREENAIQKAPGPAPASSPEVLKVGETPPKEPQDRLQMPAGLKNAP
                     PSPPPWEGSLDMFSIKHFRAKAQLISGHSCQLVQALPDVIRSAGRLPPSHVWDLLDSM
                     GPSKAKDICVIRLCPHGSRDIQNYRLLYSYLNNKQCHCLATVQQVKMVLLPLPAFEPL
                     PARLRPLGGPGLEITHTSLLLAVLFPKDALPDTATSIPVSNKVPKTVSFSKRVERILY
                     SPEDRRSEATSSPLEEDPKQSLARGSLAPRSVCAPQSFPRGRGRQGPGWGQWSPEAAW
                     CYSQHPSSAGPVFPGIGQGQHLHRASCFHHDLLQHLKVLVTMSHQFQASLWPQSQDSL
                     PPSTVVSAVPDPPGPSLGPMDGGGSNCPPPEGSDPLEPPEHEC"
ORIGIN      
        1 gtagaaggag aaggagctgt agcagctcag atgcctgttg acaagttttt agccagggct
       61 ggtggacaga ggacattgtc taggttccag gactctctgt gtgacttctt ggctactgga
      121 agctccagaa gtctttgtgg tacatcactg gacttcccag atagagtact ggtctgtaca
      181 gaggggccag caggaatgga agaggccagc agccccagct ttagacaagc caccactgtc
      241 gaaggaatgg tttccccaga ggatcctaca ctcagcaaag aggggctcag tgcaaagggc
      301 ccgcccccat ctccagtcct gccccctttc cgaaggaaat gcaggaagtg tggaatctgt
      361 ccccaggagg aggaaaagtc aggtttttcc ctgaggtttg gtcaaagacc agatggggac
      421 cctcccgagt gtgcttctcc agaggccttt gcaggtcccc caaggcttct ttcttctaag
      481 gacactgagc ctggagagcc aggtggaagt tgggtggaat gtgctgtaga aaccgaggtt
      541 gaaaacatgc tcttttctaa ggatggggtt gcgccagaca gccttgatca cctttttgaa
      601 ttcccagggc tctttggagg cgagcccctt agtctggtca cccaggagcc tcttcagagt
      661 ccagcactgt acccagaggt gctgactgag gattctacag atcagcagga agtacagccc
      721 gcgtttgtgg ttggcagccc tggcactcca cctgacccgg tggggccaga ggacaaggcc
      781 cagtcagggt ccaggatgga gctggaacaa ggactttctg ccccagccaa ttcctgtgct
      841 agctccccag agcccttggg tgggctcgat ggtgcacccc tagagcagag aagacctaca
      901 catgtgaaga agcggccttg gacaagtcca gatgactcaa gccaggatca cgcagaggga
      961 gccagtaaaa aggattttcc cagactggag gcgcgagtgc cccggggggt gaagactgta
     1021 tactatgtct acactgggtc aggaatcagg cttgtgggag ccgccagcag cagtcagcca
     1081 ggacaaattg aacctctgga ggagttggac accaactcag ccagaaggaa gagaaggccc
     1141 acaactgctc accctacccc ttgtcagagt gatccttcag aaactgagaa tgcggaacct
     1201 catcagcaga gggcagagga cccaggcgag cagggaatga cacctttgga tgctggagtg
     1261 cgatctactg tggtccgtgc catgcaggag gtgctgtgga ctcgtgccca ggagcttccc
     1321 gacctggcgt tgagggaaga tgaggtagag gccatcgcag agggcattga ggaggccctc
     1381 ttccacctga cgcaagacac caacctccgc tacaagaaca agtaccgcag cctgctcttc
     1441 aacctgcgag atccccgaaa tgttgacctg tttctcaaag tggctcactg tgacgtcacc
     1501 cctaacaacc tggtacagat gagctcaatc cagctggccc ccaaggagct gtcccgctgg
     1561 cgggaccagg aggagagaaa gggcctggac atcattgagc aacaacagaa ggaactgtac
     1621 agacttccgg cctccaaact gactcacaag ggcgaggtag agatcccacg ggacttggac
     1681 cagatgctga ctctggaaga cctgatggaa cccatagtgc ccagagagtg cagcctacag
     1741 cccctgtcga cccccctgga ggacacaacc aattggcacc agcaccacca atgtgactct
     1801 aactgtcaaa tctgcacggg tggggaggaa ggcaggaagg ctgatgatgg tagccagcca
     1861 gagctacaag tggacatcag ctacaacgtg gatcggaaat cctcaactaa actgccagcc
     1921 ttctccgggg tcatcatgaa cagggaggaa aacgccatcc agaaagcccc aggtccagct
     1981 cctgcgtcct ctccagaggt gctcaaagtt ggggagacac cccctaagga gccacaggac
     2041 aggctccaga tgcctgctgg gctcaaaaat gccccaccca gccctccacc ctgggagggc
     2101 tcactggaca tgttctccat caagcacttc cgggccaagg cccagctgat ctcgggacac
     2161 agctgtcagc ttgtccaggc tctcccagat gtcatccgct cagcaggccg cctccctcca
     2221 agccatgtct gggatcttct agatagtatg ggcccatcta aggcaaagga catctgtgtg
     2281 atcaggctgt gtccccacgg gtctcgggac atccagaact accgtctgct ttactcctac
     2341 ctcaacaaca agcagtgtca ctgcctggcc actgtgcagc aggtgaaaat ggtcctgctg
     2401 cccctgcctg cctttgagcc tctgccagcc aggctgcgcc ctctgggggg cccaggcctt
     2461 gaaattactc acacgagcct gttactagct gtactatttc ctaaggatgc gcttccagac
     2521 acagctacgt ccatccctgt gtcgaacaag gtcccaaaga ccgtgtcctt cagcaaaaga
     2581 gtggaaagga tcctctactc accagaggat aggaggtcag aggccacctc atctcccctt
     2641 gaagaggacc caaagcagag cttggccagg ggcagcttgg ctccaaggag tgtttgtgct
     2701 ccacagagct tccctagagg cagggggagg cagggacctg ggtggggaca gtggtctcca
     2761 gaagcagcct ggtgctattc ccagcatccc agttcagcag gtccagtgtt ccctggcatt
     2821 ggccaaggac agcacctcca cagggcctcc tgtttccacc acgaccttct ccagcacctc
     2881 aaggtcttag tgaccatgag tcaccagttc caggcctcac tgtggcccca aagccaggat
     2941 tccctccccc catccactgt agtatctgca gttccagacc cccctggacc ttctttgggc
     3001 cccatggatg gaggtggctc taactgtccc ccaccagagg ggtcagaccc tttagagcca
     3061 ccagaacatg agtgttgatt cctttaccga tgctgaatct gaggaggggc gagtgagctc
     3121 tcccacacct gcctagtttg tatctgttct gcagtctgtt tgatgttgat ttttggttca
     3181 ataaaaactt ggcaaagtaa
//
