LOCUS       NM_027077                749 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Mus musculus sperm microtubule inner protein 3 (Spmip3), mRNA.
ACCESSION   NM_027077 XM_129606 XM_905388 XM_974664
VERSION     NM_027077.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 749)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AK006014.1.
            
            On Apr 6, 2007 this sequence version replaced NM_027077.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK006014.1, BY706135.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384, SAMN01766828
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-749               AK006014.1         2-750
FEATURES             Location/Qualifiers
     source          1..749
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="1"
                     /map="1 82.8 cM"
     gene            1..749
                     /gene="Spmip3"
                     /gene_synonym="1700016C15Rik"
                     /note="sperm microtubule inner protein 3"
                     /db_xref="GeneID:69428"
                     /db_xref="MGI:MGI:1916678"
     exon            1..148
                     /gene="Spmip3"
                     /gene_synonym="1700016C15Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            149..226
                     /gene="Spmip3"
                     /gene_synonym="1700016C15Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             171..608
                     /gene="Spmip3"
                     /gene_synonym="1700016C15Rik"
                     /note="uncharacterized protein C1orf100 homolog; sperm
                     associated microtubule inner protein 3"
                     /codon_start=1
                     /product="protein SPMIP3"
                     /protein_id="NP_081353.1"
                     /db_xref="CCDS:CCDS48462.1"
                     /db_xref="GeneID:69428"
                     /db_xref="MGI:MGI:1916678"
                     /translation="MSTIRLREFVERRPSIPPRLYITHQGRDIKGYYPGQLARLHFDY
                     SGRKAPRPLIDLTIPLKSTTPYQPQLDQQTLIRSICSRRLSRPTDLWHNETSYQRDYS
                     LPFYESGWDRKLGTISLHPRPVNSVPEVYCCGGERSSYARSTF"
     exon            227..322
                     /gene="Spmip3"
                     /gene_synonym="1700016C15Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            323..495
                     /gene="Spmip3"
                     /gene_synonym="1700016C15Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            496..615
                     /gene="Spmip3"
                     /gene_synonym="1700016C15Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            616..749
                     /gene="Spmip3"
                     /gene_synonym="1700016C15Rik"
                     /inference="alignment:Splign:2.1.0"
     polyA_site      749
                     /gene="Spmip3"
                     /gene_synonym="1700016C15Rik"
                     /note="putative"
ORIGIN      
        1 gagtgatgta aagggatcag gtctcacagc tctgccttgt acttttcaca gcatgcccca
       61 cacagaggtg gctcaatttc ttgctgccct cagaggaaaa cttctttgaa gaaggaggcc
      121 cctgcccact gctgcccaag ccaagccgct ttctcaggtg cccctcagtc atgtcgacca
      181 tccgactacg agaatttgta gagcgtcgcc catcgattcc acctaggcta tatatcactc
      241 accaaggaag ggacatcaaa ggctattacc ctggacaact ggcaagactc cattttgatt
      301 acagtgggag gaaggctcca agacccctta tagacttgac aattccactc aagagcacaa
      361 ctccgtatca gcctcaatta gaccagcaaa cgctcattcg aagcatttgt tcaagaagat
      421 tgtcaaggcc tacagacttg tggcataatg aaacatctta ccaaagagac tactccctgc
      481 cattttatga gagtggttgg gatcggaaat taggcacgat ttcattgcat cctagaccag
      541 ttaattcagt accagaagtc tactgctgtg gtggtgagag aagcagctat gcaagaagca
      601 ctttttaaaa ctaaaggcaa attgcttggg aaatcaagat ccaaccttga gaacatgtca
      661 tctgttgaag ggaattgctg tgctgtgcag tacagtgctt gcctgcaata ccaccacata
      721 aacgggaaaa taaaaacaat gtcaatgtc
//
