LOCUS       XM_030244409            3162 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus SPG21, maspardin (Spg21), transcript
            variant X1, mRNA.
ACCESSION   XM_030244409
VERSION     XM_030244409.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000075.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3162
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="9"
     gene            1..3162
                     /gene="Spg21"
                     /gene_synonym="ACP33; BM-019; D9Wsu18e; GL010; MAST"
                     /note="SPG21, maspardin; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 29
                     mRNAs, 153 ESTs, 1648 long SRA reads, 8 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 9 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:27965"
                     /db_xref="MGI:MGI:106403"
     CDS             1729..2655
                     /gene="Spg21"
                     /gene_synonym="ACP33; BM-019; D9Wsu18e; GL010; MAST"
                     /codon_start=1
                     /product="maspardin isoform X1"
                     /protein_id="XP_030100269.1"
                     /db_xref="GeneID:27965"
                     /db_xref="MGI:MGI:106403"
                     /translation="MGEIKVSPDYNWFRSTVPLKKIIVDDDDSKIWSLYDAGPRSIRC
                     PLIFLPPVSGTADVFFQQILALTGWGYRVIALQYPVYWDHLEFCDGFRKLLDHLQLDK
                     VHLFGASLGGFLAQKFAEYTHKSPRVHSLILCNAFSDTSIFNQTWTANSFWLMPAFML
                     KKIVLGNFSSGPVDPMMADAIDFMVDRLESLGQSELASRLTLNCQNSYVEPHKIRDIP
                     VTIMDVFDQSALSTEAKEEMYKLYPNARRAHLKTGGNFPYLCRSAEVNLYVQIHLLQF
                     HGTKYAAIDPSVVSAEELEVQKGRLGLSQEEP"
ORIGIN      
        1 agtttactaa accacagagt ggccgtatct tagtcaagta ctctggttat gtctgaaggt
       61 atctctggat gagattaaca acgtttagtg gtcaacccag taaagctgat tgcttttcta
      121 atgtgagtta aaaacaaaag gcgaggctga tagcttgggg gtacagtgcc tgcaaaaaag
      181 cataagaacg tgagtttgga tccctgcttc cacatagaaa acagacatgg cgacttctgg
      241 aaccccagta ctggggcagc agagactgat ggatcccagt gacccactgg ccagccagtg
      301 tagttcagtg ggctccaggt tcatcaagag accctgcctg agaaagagag gaaggcagga
      361 gatgaagaga aagcaaagaa ggaacagtag atgtcagact ttgttagtcg cttctgctct
      421 aatgagacct aaccctgttg actttgaact ggagtcagaa actagtgact gtgcagttgg
      481 ctggcagact gcagatctgg agactcgatg gccttcatgg ctgtgtggcc cacattataa
      541 atctgccatt tctctgcctt tacctcacct ccgtgctgct gtgttccgcc tttgggcctt
      601 ctacaatcat ttttctcctg gggggcagcc acgctgtgga gtacacggtt acaccaacat
      661 gaggaaaaag gttttagagt gagacaagat ctcagaattt catctcagag atggggaaat
      721 gaaggctggg cagtggtagc acacaccttt gatcccagca cacagacgga gaggcaggtg
      781 gacctttgag ttcgaggcca gcctggtcta caaagtgagt tccaggacag ccagggctac
      841 acagagaaac cctgtctcga aaaacaaaac aaaaagcata cgtgaaggaa caagttcagg
      901 cattgctgca ttgctacatt gcgaagaatc cgaacctcag gatttatcag atttctgtgt
      961 gtgtggagag gggcagtcag ttttctcttt ctaccttagc aaagctgtaa gctaactgaa
     1021 aggtgttgtg gcatctgcca catctctcgt aagaacagtg actagactgt gcctgacaga
     1081 agagggcaaa ccagcgctga gtataccccc tcaacatcag cacaaagcca taaaaggaga
     1141 caaggctttg aaaggaggtc agaggacagc gtctatacaa aagactatgt caaggcctat
     1201 tcaccaaagc tatggaccaa aagtgtctcc ccaccaaagc atgaagacgc ctaaaaaccg
     1261 aagtcagaag cacatccccg gggcctacag cctagatttt tcacttcctc ctccatgctc
     1321 ctgtcagaag tgaccaagaa ctgaccctta tccaccacca gcctccacag cctctaggac
     1381 accgcaaatc tcagaacagg gcctcccttg ccagccccgt cgccatagta accaccagag
     1441 ccccgcccct tcctcgccat ctggtcccgc ctcctcggaa cccggaagcg ggaggcgcgc
     1501 ccggggagct cgcagtacca aagctgggag gcggtggcct ctggctgctc ggccgcgcgc
     1561 cccctctgcc cgctgctccc gcggggctcc tgatctgcgg ccgccggtcc agtccgcgcc
     1621 ccgccgactc catcctctgc gcccaaatcg gggcgaagat ccgtctaggc tggaaagaaa
     1681 gggacgcggg agcggccacg gcagggttaa cctctgcttc tgctcatcat gggagagatc
     1741 aaagtctctc cagattataa ttggtttaga agtactgttc ccctgaaaaa gataatcgtg
     1801 gatgacgatg acagtaagat ctggtcgctc tacgacgctg gccccagaag catcaggtgt
     1861 cctctcatct ttcttcctcc tgtcagcgga actgcagatg tgtttttcca gcagattctg
     1921 gctttgactg gatggggtta ccgggttata gctttgcagt atccagttta ttgggaccat
     1981 cttgaattct gtgatggatt cagaaaactt ttagaccact tacaactgga taaagttcat
     2041 ctgtttgggg catctttggg aggctttttg gctcaaaaat ttgctgaata cactcacaag
     2101 tctcccaggg tacactccct catcctgtgc aatgccttca gtgacacgtc tatcttcaac
     2161 caaacatgga ctgcaaatag cttctggttg atgccagcgt ttatgctcaa gaaaatcgtt
     2221 ttggggaact tttcctctgg cccagtagac ccgatgatgg ctgatgccat tgatttcatg
     2281 gtggacaggc tggagagttt gggtcaaagt gaactggctt caaggctaac tctcaactgt
     2341 cagaattcct atgtggagcc acataagatc cgggacatcc ccgtcaccat catggatgtg
     2401 tttgaccaga gtgcgctgtc aacagaagcc aaggaagaaa tgtacaaact gtaccctaat
     2461 gcgcggagag cccaccttaa gacaggaggc aattttccct acctgtgcag gagtgcagag
     2521 gtcaatcttt atgtgcagat acatctgctg cagttccatg gaaccaagta cgctgccatc
     2581 gatccgtcag tggtcagtgc ggaggagcta gaggtgcaga aaggccgcct cggcctcagc
     2641 caggaagagc catagatggg gcttgagatg ccgaaccacc ctgctcttgc acaatcagtt
     2701 cgggttcgtt ggtcgggcac actggtcctc acccttctgg aagtcggact gattgtcaat
     2761 ctcatgacag gcgtcagctc ttctaaacca gtgtgactgg cccctctcca catttgtttt
     2821 tgttttaaac ttttaaattt gaagaacttt taaagactcc cattttaaga attgtgaaaa
     2881 ttttgctacc aaaagtcttc tccactctgt tcatctcaaa agcttgggat catgtggcgt
     2941 tctctctttt cctgctttct ataactgctg cacccacctc caggttagaa gaggagcacc
     3001 ggtcattttt atgctttctt gggcataacc agagggtcga ggctggcagc ctgctggcca
     3061 ctccctacac atcagctttt ttgctttcca gttgagcaca tcattttgag tattagctgt
     3121 tgtatttcta gacattacat ttggaataaa aattgaattt ca
//
