LOCUS       NM_001177579            3342 bp    mRNA    linear   ROD 11-OCT-2023
DEFINITION  Mus musculus spermatogenesis associated glutamate (E)-rich protein
            4A2 (Speer4a2), mRNA.
ACCESSION   NM_001177579 XR_030559
VERSION     NM_001177579.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3342)
  AUTHORS   Spiess AN, Walther N, Muller N, Balvers M, Hansis C and Ivell R.
  TITLE     SPEER--a new family of testis-specific genes from the mouse
  JOURNAL   Biol Reprod 68 (6), 2044-2054 (2003)
   PUBMED   12606357
REFERENCE   2  (bases 1 to 3342)
  AUTHORS   Mural RJ, Adams MD, Myers EW, Smith HO, Miklos GL, Wides R, Halpern
            A, Li PW, Sutton GG, Nadeau J, Salzberg SL, Holt RA, Kodira CD, Lu
            F, Chen L, Deng Z, Evangelista CC, Gan W, Heiman TJ, Li J, Li Z,
            Merkulov GV, Milshina NV, Naik AK, Qi R, Shue BC, Wang A, Wang J,
            Wang X, Yan X, Ye J, Yooseph S, Zhao Q, Zheng L, Zhu SC, Biddick K,
            Bolanos R, Delcher AL, Dew IM, Fasulo D, Flanigan MJ, Huson DH,
            Kravitz SA, Miller JR, Mobarry CM, Reinert K, Remington KA, Zhang
            Q, Zheng XH, Nusskern DR, Lai Z, Lei Y, Zhong W, Yao A, Guan P, Ji
            RR, Gu Z, Wang ZY, Zhong F, Xiao C, Chiang CC, Yandell M, Wortman
            JR, Amanatides PG, Hladun SL, Pratts EC, Johnson JE, Dodson KL,
            Woodford KJ, Evans CA, Gropman B, Rusch DB, Venter E, Wang M, Smith
            TJ, Houck JT, Tompkins DE, Haynes C, Jacob D, Chin SH, Allen DR,
            Dahlke CE, Sanders R, Li K, Liu X, Levitsky AA, Majoros WH, Chen Q,
            Xia AC, Lopez JR, Donnelly MT, Newman MH, Glodek A, Kraft CL,
            Nodell M, Ali F, An HJ, Baldwin-Pitts D, Beeson KY, Cai S, Carnes
            M, Carver A, Caulk PM, Center A, Chen YH, Cheng ML, Coyne MD,
            Crowder M, Danaher S, Davenport LB, Desilets R, Dietz SM, Doup L,
            Dullaghan P, Ferriera S, Fosler CR, Gire HC, Gluecksmann A, Gocayne
            JD, Gray J, Hart B, Haynes J, Hoover J, Howland T, Ibegwam C,
            Jalali M, Johns D, Kline L, Ma DS, MacCawley S, Magoon A, Mann F,
            May D, McIntosh TC, Mehta S, Moy L, Moy MC, Murphy BJ, Murphy SD,
            Nelson KA, Nuri Z, Parker KA, Prudhomme AC, Puri VN, Qureshi H,
            Raley JC, Reardon MS, Regier MA, Rogers YH, Romblad DL, Schutz J,
            Scott JL, Scott R, Sitter CD, Smallwood M, Sprague AC, Stewart E,
            Strong RV, Suh E, Sylvester K, Thomas R, Tint NN, Tsonis C, Wang G,
            Wang G, Williams MS, Williams SM, Windsor SM, Wolfe K, Wu MM,
            Zaveri J, Chaturvedi K, Gabrielian AE, Ke Z, Sun J, Subramanian G,
            Venter JC, Pfannkoch CM, Barnstead M and Stephenson LD.
  TITLE     A comparison of whole-genome shotgun-derived mouse chromosome 16
            and the human genome
  JOURNAL   Science 296 (5573), 1661-1671 (2002)
   PUBMED   12040188
  REMARK    Erratum:[Science 2002 Aug 23;297(5585):1278]
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC125090.3.
            
            On Apr 18, 2010 this sequence version replaced XR_030559.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC145097.1, SRR5189685.109749.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384, SAMN01164133
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-180               AC125090.3         62487-62666
            181-340             AC125090.3         63651-63810
            341-484             AC125090.3         65199-65342
            485-668             AC125090.3         65978-66161
            669-3342            AC125090.3         66906-69579
FEATURES             Location/Qualifiers
     source          1..3342
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="5"
                     /map="5 12.44 cM"
     gene            1..3342
                     /gene="Speer4a2"
                     /gene_synonym="Gm10471"
                     /note="spermatogenesis associated glutamate (E)-rich
                     protein 4A2"
                     /db_xref="GeneID:100039045"
                     /db_xref="MGI:MGI:3641900"
     exon            1..180
                     /gene="Speer4a2"
                     /gene_synonym="Gm10471"
                     /inference="alignment:Splign:2.1.0"
     CDS             87..845
                     /gene="Speer4a2"
                     /gene_synonym="Gm10471"
                     /codon_start=1
                     /product="spermatogenesis associated glutamate (E)-rich
                     protein 4-like"
                     /protein_id="NP_001171050.1"
                     /db_xref="CCDS:CCDS80236.1"
                     /db_xref="GeneID:100039045"
                     /db_xref="MGI:MGI:3641900"
                     /translation="MWMGETREGRKDADLPSKSNEGRRRWTWRMWMAHRQKTSPVPVT
                     SKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEK
                     EIMTFLHNLEMENMEARENKQELKKEKNFYRNLHTRILLEENLIKKKLAILQQESKEI
                     HADWAIIHQRLVELNLSGKDEQEKTSNLETQEHQVSEAARELGLATAEEDSILQNELP
                     CQEAPAEHHPQHPPSSSDESSSDESSYSTCPEWE"
     exon            181..340
                     /gene="Speer4a2"
                     /gene_synonym="Gm10471"
                     /inference="alignment:Splign:2.1.0"
     exon            341..484
                     /gene="Speer4a2"
                     /gene_synonym="Gm10471"
                     /inference="alignment:Splign:2.1.0"
     exon            485..668
                     /gene="Speer4a2"
                     /gene_synonym="Gm10471"
                     /inference="alignment:Splign:2.1.0"
     exon            669..3342
                     /gene="Speer4a2"
                     /gene_synonym="Gm10471"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aaactcactg agatttctca gtcagaggct ggacattgca gtgatggcct tgtttgcccg
       61 actctgcaga ctttttcaga gagccaatgt ggatgggaga gaccagagag gggaggaagg
      121 acgctgacct tccatctaag agtaatgaag gacgaaggag gtggacttgg cgaatgtgga
      181 tggctcacag acagaaaaca tcccctgtac ctgtcacaag caaaaagcag tttgagaagg
      241 aagagaagga gctgatcaaa aagatccagc tcactaccga ggagacaaat gagctgagag
      301 atcgcctgat ctacgtgacc gagggatcca tgaacaagag gccctaccac aggcaaactc
      361 gacattataa agaactgaaa ttaaaggaga aggagatcat gacatttcta cacaacttag
      421 agatggagaa catggaggcc cgagagaaca agcaggagct caagaaggag aaaaatttct
      481 atcgtaacct gcacacccgg atcctgctgg aggagaatct tataaagaag aagttggcga
      541 tattgcagca ggagagcaag gaaatacatg ctgattgggc catcattcac caacgtttgg
      601 tggagttgaa cctgagtggt aaagacgaac aggagaagac cagcaacctg gagactcaag
      661 aacatcaggt ctcagaagct gcaagagagc tgggattggc cacagctgaa gaagacagca
      721 tcttgcagaa tgagttgcca tgccaggaag cccctgctga gcaccatccc cagcacccac
      781 catcttcctc ggatgaatct tcctcagatg aatcttctta tagcacatgt cctgagtggg
      841 aataggccct accgaggaag acatggctga ttcagggcgt tgttcccttt tctcttcaga
      901 caacgactct tggtagagaa ctgaggcggc tgcactgcta ccaagtgtcc aagaggagca
      961 gcaggctgga gggctgtgct gctaaaagtg cagaaaaatg ctgctgaaca ataattttcc
     1021 tttagagttt tggttgaagt tttcattttg ttctttgagt tatttttatg ttatttagaa
     1081 gttatatgtt cttgttcttg tatttcattg tttgtttttg cctttatctc tatattaatt
     1141 gaacttttaa aacctatttt ttaaaaattc tatttcttat gcagaaaaat tgatttgcaa
     1201 gtagtgactc ttgagaccat cttctttatt caggtgttct atcccctgct gtagacctag
     1261 aactcacatc cagagatgta tctttgtaag ttccaggcag ccagggctgt ataataaagt
     1321 catagcctag ccacctaggg gtatacaagg tgatgatttt ttgtgtcgat aattttactt
     1381 accccaggga cacacacttg aagatgtaat cactgccata ctgcatccat ggtgtcatga
     1441 attctcttac tcctaacata tagcactcta taaaacacat tcattcatga tcccgtgaac
     1501 cagatactga gtaatataca gccattgttc tagagctgct gcagatataa aaacactcag
     1561 aaaggaatat aaaataaatc aggaaggcca gagccagctg cctcagttta cttgcaatag
     1621 agcatcagtg attgaggaga acaatggctt ccctttggtt ctggcctgaa agggtcagag
     1681 ccgttaactg gggaaaggga gggatgtcta aacatgactt tctgtgagcc agagtttttc
     1741 cttgttccta gtcaagagtt aatatttacc ctgggaggaa gatgtccttg ggtcttcaga
     1801 taacagtttc ttcttctgaa attcattgtt gttatgagaa aatgacccca aaattgataa
     1861 tattgtttgc cagatgcaac taagtaaaaa tgttattttt gagcaaaatt tgcaaagtca
     1921 taccccatgt ttttaagctg tagaaatcag taaaactttc ctacttgcca ctagagcggt
     1981 agtccatctg tttctttagg gcgatcttga agctggtctt tatcaagtga taaccacata
     2041 gcagatataa tgaccttcca tggcttgctg ggaaatagct tttgatagat gctgttgtcc
     2101 ttggccataa acttgctgtg tttttgctgt tgctgattag acttatgttt aacatttatg
     2161 tgaatgggtg tctttcctac tgaatataat actgtatgtg gctcctcctg agggacattt
     2221 ccctcagagg acagaagaag gaaccacaac cattcctgga gatggatgtt aggcaccatg
     2281 tgggtcttct agagagtagc agatgctctt atctgtgagg catccccaca cctcctgcag
     2341 ttggcttttg tccttccaga gaaggtgctg ttttagatgg ccaggatcat gtccagttga
     2401 ttggagaaat ctcaggagat gtctaagtac agtgcctgat ctgcgcatac tcattgtcct
     2461 atgctgccag gcatgtatgc agggctctga tgttaccact ggcagttctg tgttcagagc
     2521 cttttaattg gacaaaatgg ggtaggggga aagttgtgga ttgctgtttg tgttttctgc
     2581 tccctcaaga gtccctaaac acaggttcag tcaggtgaaa tattaattgg tcagataagg
     2641 ctagaggctc ttattggaca attgggaaga aaggcagatc tgaaatatta gagagtggaa
     2701 gtgtgatgga gaagagagag ggaacggagg acaaaaatgg aggaatagga agatggtgct
     2761 agactacagg gccctaaggt ccataaatac ctggggattt cataaatagg aaatagagta
     2821 atgtaggtac attttcctga tctaagtgtg caggttttat ttatatgtgt tgagttttgt
     2881 attgcttgca tgggcacttt gtgcttgtag atttccccta ataaatttgg ctggcatatt
     2941 acaagtcttt tgtgttatta ttctaagagg taaaggggaa gtgtgagtgg cagccagctc
     3001 actgtaggct agccacaggt ggtggatggc attagaagta taaacagcct ggcagcagct
     3061 aaccatggga aacagggcaa gagtgctgca tgcggctggc cactcgaggt tacagagatc
     3121 atcttgcctg tccctaacca cttagcatgg attgggtttt gtttttatgt tttgttgttt
     3181 tggttttggg tttttttaag gttttttttt tttttttttt tttgggtaca agctacaatc
     3241 atgtatttcc ttttgttcta agcaaagtag caatctctcc aacttgaaga aaacaataaa
     3301 agatccccca tgccctgttt cttttgtctg tgatccaagc cc
//
