LOCUS       NM_029376               1503 bp    mRNA    linear   ROD 11-OCT-2023
DEFINITION  Mus musculus spermatogenesis associated glutamate (E)-rich protein
            4A1 (Speer4a1), mRNA.
ACCESSION   NM_029376 XM_907624 XM_920499
VERSION     NM_029376.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1503)
  AUTHORS   Spiess AN, Walther N, Muller N, Balvers M, Hansis C and Ivell R.
  TITLE     SPEER--a new family of testis-specific genes from the mouse
  JOURNAL   Biol Reprod 68 (6), 2044-2054 (2003)
   PUBMED   12606357
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC125090.3 and AK006439.1.
            
            On Jul 28, 2007 this sequence version replaced NM_029376.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK006439.1, SRR5189685.110051.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384, SAMN01164133
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-161               AC125090.3         112246-112406
            162-321             AC125090.3         113405-113564
            322-465             AC125090.3         114924-115067
            466-1083            AK006439.1         470-1087
            1084-1503           AC125090.3         117062-117481
FEATURES             Location/Qualifiers
     source          1..1503
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="5"
                     /map="5 12.44 cM"
     gene            1..1503
                     /gene="Speer4a1"
                     /gene_synonym="1700027N01Rik; SPEER-4A; Speer4a"
                     /note="spermatogenesis associated glutamate (E)-rich
                     protein 4A1"
                     /db_xref="GeneID:75657"
                     /db_xref="MGI:MGI:1922907"
     exon            1..161
                     /gene="Speer4a1"
                     /gene_synonym="1700027N01Rik; SPEER-4A; Speer4a"
                     /inference="alignment:Splign:2.1.0"
     CDS             23..826
                     /gene="Speer4a1"
                     /gene_synonym="1700027N01Rik; SPEER-4A; Speer4a"
                     /note="sperm-associated glutamate (E)-rich protein 4a;
                     spermatogenic-associated glutamate (E)-rich protein 4a"
                     /codon_start=1
                     /product="spermatogenesis associated glutamate (E)-rich
                     protein 4a"
                     /protein_id="NP_083652.2"
                     /db_xref="CCDS:CCDS51441.1"
                     /db_xref="GeneID:75657"
                     /db_xref="MGI:MGI:1922907"
                     /translation="MALFARLCRLFQRANVNGRETREGRKDANLPPESNEGRRRWTWR
                     MWMAHRQTTSSVPVTSKKQFEKEEKELIKKIQLTTKETNELRDRLIYVTEGSMNKRPY
                     HRQTRHYKELKLKEKEIMTYLHNLEMENMEARENKQEFKKEKNFYRNLHTRILLEENL
                     IKKKLAILQQESKEIHADWAIIQERLVELNLSCKDEQEKTSNLETQENQVSEAARELG
                     LATAEEDSILQNELPCQEAPAEHHTQNPPSSSDESSSDESSYSTCPAWE"
     exon            162..321
                     /gene="Speer4a1"
                     /gene_synonym="1700027N01Rik; SPEER-4A; Speer4a"
                     /inference="alignment:Splign:2.1.0"
     exon            322..465
                     /gene="Speer4a1"
                     /gene_synonym="1700027N01Rik; SPEER-4A; Speer4a"
                     /inference="alignment:Splign:2.1.0"
     exon            466..649
                     /gene="Speer4a1"
                     /gene_synonym="1700027N01Rik; SPEER-4A; Speer4a"
                     /inference="alignment:Splign:2.1.0"
     exon            650..1503
                     /gene="Speer4a1"
                     /gene_synonym="1700027N01Rik; SPEER-4A; Speer4a"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tcagaggctg gatattgcag tgatggcctt gtttgcccga ctctgcagac tctttcagag
       61 agccaatgtg aatgggagag agaccagaga ggggaggaag gatgctaacc ttccacctga
      121 gagtaatgaa ggacgaagga ggtggacttg gcgaatgtgg atggctcaca gacagacaac
      181 atcctctgta cctgtcacaa gcaaaaagca gtttgagaag gaagagaagg agctgatcaa
      241 aaagatccag ctcactacca aggagacaaa tgagctgaga gatcgcctga tctacgtgac
      301 cgagggatcc atgaacaaga ggccctacca caggcaaact cgacattata aagaactgaa
      361 attaaaggag aaggagatca tgacatatct acacaactta gagatggaga acatggaggc
      421 ccgagagaac aagcaggagt tcaagaagga gaaaaatttc tatcgtaacc tgcacacccg
      481 gatcctgctg gaggagaatc ttataaagaa aaagttggcg atattgcagc aggagagcaa
      541 ggaaatacat gctgattggg ccatcattca agaacgtttg gtggagttga acctgagttg
      601 taaagatgaa caggagaaga ccagcaacct ggagactcaa gaaaatcagg tctcagaagc
      661 tgcaagagag ctgggattgg ccacagctga agaagacagc atcttgcaga atgagttgcc
      721 atgccaggag gcccctgctg agcaccatac ccagaaccca ccatcttcct cggatgaatc
      781 ttcctcagat gaatcttctt atagcacatg tcctgcgtgg gaataggccc taccgaggaa
      841 gccatggctg attcagggca ttgttccctt ttctcttcag acaacgactc ttggtagaga
      901 actgaggcgg ctgcactgct accaagtgtc caagaggagc agcaggctgg agggctgtgc
      961 tgctaaaagt gcagaaaaaa gctgctgaac aataattttc ctttagagtt ttggttgaag
     1021 ttttcatttt tgttctttga gttattgtta tgttatttag aagttatatg ttcttgttct
     1081 tgtatttcat tgtttgtttt tgcctttatc tctatattaa ttgaactttt aaaacctatt
     1141 ttttaaaaat tctatttctt atgcagaaaa attgatttgc aagtagtgac tcttgagaca
     1201 agcttcctta ttcaggtgtt ctatcccctg ctgtagacct agaactcaca tccagtgatg
     1261 gatctttgta agttccaggc agccagggct gtatagtaaa gtcatagcct agccacctag
     1321 gggtataaaa ggtgatgatc ttttgtgtca atgatattac ttaccccatg gaaacacact
     1381 tgatgatgta atcactgcca tattgcatcc attgtgtcat gaattctatt actggtaaca
     1441 tatagcactc tataacacac attcattcat gatcccgtga accagatact gagtaatata
     1501 cag
//
