LOCUS       NM_001309520            1165 bp    mRNA    linear   ROD 11-OCT-2023
DEFINITION  Mus musculus spermatogenesis associated glutamate (E)-rich protein
            1A (Speer1a), transcript variant 1, mRNA.
ACCESSION   NM_001309520
VERSION     NM_001309520.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1165)
  AUTHORS   Spiess AN, Walther N, Muller N, Balvers M, Hansis C and Ivell R.
  TITLE     SPEER--a new family of testis-specific genes from the mouse
  JOURNAL   Biol Reprod 68 (6), 2044-2054 (2003)
   PUBMED   12606357
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AC140842.4.
            
            On Jun 8, 2015 this sequence version replaced NM_001309520.1.
            
            Transcript Variant: This variant (1) represents the longer
            transcript and encodes the functional protein.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            CDS exon combination :: BF021818.1 [ECO:0000331]
            RNAseq introns       :: single sample supports all introns
                                    SAMN00849384 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            CDS uses downstream in-frame AUG :: upstream AUG and CDS extension
                                                is not conserved
            RefSeq Select criteria           :: based on single protein-coding
                                                transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-159               AC140842.4         88676-88834
            160-319             AC140842.4         89892-90051
            320-469             AC140842.4         91309-91458
            470-642             AC140842.4         92080-92252
            643-1165            AC140842.4         92966-93488
FEATURES             Location/Qualifiers
     source          1..1165
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="5"
                     /map="5 3.84 cM"
     gene            1..1165
                     /gene="Speer1a"
                     /gene_synonym="4921519H07Rik; SPEER-1; Speer1; Speer1-ps1"
                     /note="spermatogenesis associated glutamate (E)-rich
                     protein 1A"
                     /db_xref="GeneID:70896"
                     /db_xref="MGI:MGI:1918146"
     exon            1..159
                     /gene="Speer1a"
                     /gene_synonym="4921519H07Rik; SPEER-1; Speer1; Speer1-ps1"
                     /inference="alignment:Splign:2.1.0"
     CDS             153..626
                     /gene="Speer1a"
                     /gene_synonym="4921519H07Rik; SPEER-1; Speer1; Speer1-ps1"
                     /codon_start=1
                     /product="spermatogenesis associated glutamate (E)-rich
                     protein 1A"
                     /protein_id="NP_001296449.1"
                     /db_xref="CCDS:CCDS89879.1"
                     /db_xref="GeneID:70896"
                     /db_xref="MGI:MGI:1918146"
                     /translation="MWRARRHTSSTAPDLSKKEFKKEKERLTTELHLLIQLRNEQRDH
                     LIDFKQSSNYNRTKPTQKKNPFYEQLRSTKNQVLSSVHKLEMGIIEAQENIQELNKWI
                     DYFTNLHSQLLMEKNLKMPVTQNQKNKEVEIDWALIEKYLVDLNLNGRTGADQQP"
     exon            160..319
                     /gene="Speer1a"
                     /gene_synonym="4921519H07Rik; SPEER-1; Speer1; Speer1-ps1"
                     /inference="alignment:Splign:2.1.0"
     exon            320..469
                     /gene="Speer1a"
                     /gene_synonym="4921519H07Rik; SPEER-1; Speer1; Speer1-ps1"
                     /inference="alignment:Splign:2.1.0"
     exon            470..642
                     /gene="Speer1a"
                     /gene_synonym="4921519H07Rik; SPEER-1; Speer1; Speer1-ps1"
                     /inference="alignment:Splign:2.1.0"
     exon            643..1165
                     /gene="Speer1a"
                     /gene_synonym="4921519H07Rik; SPEER-1; Speer1; Speer1-ps1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agtgtctagc cactaggttg gtgaacatgt ttgctcgact ctgcaatctt tttgggagag
       61 ccaatgtgga tgggagagag gccagagaga ggaggaaaga tgctggcctt ccatctgaga
      121 gtaatgaagg tcgaaggagg tggacttgga gaatgtggag ggctcgaaga cacacatcat
      181 ccactgcacc tgacctaagt aagaaggagt tcaaaaagga aaaagagagg ctgaccacag
      241 agctgcacct cctcatccag ctgagaaatg agcagagaga tcacctgatc gatttcaaac
      301 agagttccaa ttacaatagg accaagccca cccagaagaa aaatccattc tatgaacaac
      361 tgagatcaac gaagaaccag gtcctgtctt ctgtgcataa gttagagatg gggataattg
      421 aggcccaaga gaatatccag gagctcaata agtggataga ctactttaca aacctacata
      481 gccagctctt gatggagaag aatcttaaga tgcctgtcac acagaaccag aagaacaagg
      541 aagtagagat tgattgggct ctcattgaga aatatttggt tgacttgaac ctgaatggac
      601 gaacaggagc agaccagcaa ccatgagacc caacaacttc aggactcagc gactccagca
      661 agagctgaaa tgtccacatc ccaggaagag agcctcctgc agaatgaatt tccacctcag
      721 gagccccctg ctgaactcca tccccaacat ccacagtcta ccttgaatga atcttcttac
      781 actcagtaca tttacaaggt gtgaatggga ggaagccagt gagccagctg atttagggtg
      841 ttgttccctt tcctgttcta gcaacacctc ttgagaaaca actgaggtga ctgcccctcc
      901 aacagcagtc caagaggaga tacaggctgt aggtctgtac tccttaacat gcagtgaaag
      961 ggtgctgatg ttcaatcatt ttctgttcaa gttttggtta aagttttgct ctttattgtt
     1021 ttatttactt tttaggtttt gctgaagtta tatgttctta tttggttttc atggttgaat
     1081 ttttcttttc atctcttttt agtattgtac ttttaaagcc tgtttaataa cattgtattt
     1141 ccagtaaata aaaattgatt tacaa
//
