LOCUS       NM_029048               1819 bp    mRNA    linear   ROD 03-FEB-2024
DEFINITION  Mus musculus speedy/RINGO cell cycle regulator family, member E4A
            (Spdye4a), transcript variant 1, mRNA.
ACCESSION   NM_029048 XM_982224
VERSION     NM_029048.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1819)
  AUTHORS   Xu,H., Ding,H. and Zheng,H.
  TITLE     Murine fertility and spermatogenesis are independent of the
            testis-specific Spdye4a gene
  JOURNAL   Gen Comp Endocrinol 330, 114148 (2023)
   PUBMED   36272447
  REMARK    GeneRIF: Murine fertility and spermatogenesis are independent of
            the testis-specific Spdye4a gene.
REFERENCE   2  (bases 1 to 1819)
  AUTHORS   Cheng,A., Xiong,W., Ferrell,J.E. Jr. and Solomon,M.J.
  TITLE     Identification and comparative analysis of multiple mammalian
            Speedy/Ringo proteins
  JOURNAL   Cell Cycle 4 (1), 155-165 (2005)
   PUBMED   15611625
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK015441.1 and AC123686.11.
            
            On Nov 10, 2006 this sequence version replaced NM_029048.2.
            
            Transcript Variant: This variant (1) represents the longer
            transcript and encodes the longer isoform (1).
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK015441.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1082              AK015441.1         2-1083
            1083-1083           AC123686.11        120160-120160
            1084-1819           AK015441.1         1085-1820
FEATURES             Location/Qualifiers
     source          1..1819
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="5"
                     /map="5 82.01 cM"
     gene            1..1819
                     /gene="Spdye4a"
                     /gene_synonym="4930445A17Rik; 4930451F05Rik; RINGO E4A;
                     Spdy2; Spdyb; Spdye4; Spy/Ringo B"
                     /note="speedy/RINGO cell cycle regulator family, member
                     E4A"
                     /db_xref="GeneID:74673"
                     /db_xref="MGI:MGI:1921923"
     exon            1..289
                     /gene="Spdye4a"
                     /gene_synonym="4930445A17Rik; 4930451F05Rik; RINGO E4A;
                     Spdy2; Spdyb; Spdye4; Spy/Ringo B"
                     /inference="alignment:Splign:2.1.0"
     CDS             76..882
                     /gene="Spdye4a"
                     /gene_synonym="4930445A17Rik; 4930451F05Rik; RINGO E4A;
                     Spdy2; Spdyb; Spdye4; Spy/Ringo B"
                     /note="isoform 1 is encoded by transcript variant 1;
                     speedy protein B; rapid inducer of G2/M progression in
                     oocytes B; speedy homolog 2; speedy homolog E4; mSpy/Ringo
                     B; mSpy/Ringo E4A; rapid inducer of G2/M progression in
                     oocytes E4A; speedy protein E4A"
                     /codon_start=1
                     /product="speedy protein E4A isoform 1"
                     /protein_id="NP_083324.3"
                     /db_xref="CCDS:CCDS39368.1"
                     /db_xref="GeneID:74673"
                     /db_xref="MGI:MGI:1921923"
                     /translation="MGEGTPGVDSARVQEEGGRDQSLGFVEGRIQVGRIVTAGQLSLC
                     SEEQSPQPGITRPSPGVVVDGESSGLAEPRVEATPQPPSSIQKRKRDESLDSEDDLAE
                     LFEPDPQPVWSVEMLCGLRMRLKRRRVSTVRPEHHKVFTKLLEDPVVKKFLTWDKMLR
                     VSDKYLLSMVIAYFSRAGLFSWQYRPIHFFLALYLANDMEEDNQAPKQDIFYFLYGKS
                     YAQRPMFHKLRFQFIRSMGWKIWVSREECEEIQAYNPDLWVWARDRTNLT"
     exon            290..508
                     /gene="Spdye4a"
                     /gene_synonym="4930445A17Rik; 4930451F05Rik; RINGO E4A;
                     Spdy2; Spdyb; Spdye4; Spy/Ringo B"
                     /inference="alignment:Splign:2.1.0"
     exon            509..567
                     /gene="Spdye4a"
                     /gene_synonym="4930445A17Rik; 4930451F05Rik; RINGO E4A;
                     Spdy2; Spdyb; Spdye4; Spy/Ringo B"
                     /inference="alignment:Splign:2.1.0"
     exon            568..653
                     /gene="Spdye4a"
                     /gene_synonym="4930445A17Rik; 4930451F05Rik; RINGO E4A;
                     Spdy2; Spdyb; Spdye4; Spy/Ringo B"
                     /inference="alignment:Splign:2.1.0"
     exon            654..822
                     /gene="Spdye4a"
                     /gene_synonym="4930445A17Rik; 4930451F05Rik; RINGO E4A;
                     Spdy2; Spdyb; Spdye4; Spy/Ringo B"
                     /inference="alignment:Splign:2.1.0"
     exon            823..925
                     /gene="Spdye4a"
                     /gene_synonym="4930445A17Rik; 4930451F05Rik; RINGO E4A;
                     Spdy2; Spdyb; Spdye4; Spy/Ringo B"
                     /inference="alignment:Splign:2.1.0"
     exon            926..1819
                     /gene="Spdye4a"
                     /gene_synonym="4930445A17Rik; 4930451F05Rik; RINGO E4A;
                     Spdy2; Spdyb; Spdye4; Spy/Ringo B"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 actccatggt ggcaggcagc tcggtggaca acagcatctt cttggagttt tcctccactc
       61 ttgacttctc cctagatggg ggaagggacg ccaggcgtgg attcagccag agtccaggag
      121 gagggcggga gagatcagag tctgggattt gtggaaggga gaatacaggt tgggagaatc
      181 gtgactgctg gccaactgtc attgtgttct gaggaacaga gccctcagcc tggcatcacc
      241 aggccctcac ctggggtggt ggtagatggg gagagctcag gactggcaga accaagggtg
      301 gaagccactc cccagcctcc atccagcatc caaaagagga agagggacga gtcattagat
      361 tctgaggatg acctggcaga gctatttgaa cctgatcccc agccagtgtg gtcagtggag
      421 atgctgtgcg gacttaggat gaggctgaag aggcgacgtg tgtctacagt gaggcctgaa
      481 caccacaagg tcttcaccaa gctgctcgag gatcctgtgg tgaaaaaatt cctgacctgg
      541 gacaagatgc tgagggtgtc agacaagtac ctcctgtcta tggtcatagc ttatttcagc
      601 cgcgctgggc tcttctcctg gcagtacagg cccatccact tcttcctggc tctctacctg
      661 gccaatgaca tggaggagga caaccaggcc cctaagcaag acatttttta cttcctctat
      721 gggaagagct atgcccagcg ccccatgttc cacaaactgc gctttcagtt cattcggtcc
      781 atgggctgga agatctgggt gtcccgggag gagtgtgaag agatccaggc ttacaatcca
      841 gacctttggg tgtgggcacg agatcgcacc aacctgacct agaaccctaa gactatggag
      901 gcctgagatc atcggcctga ggaaaatccc tgtgtccgaa ggagatgctc tatgccaaca
      961 ttaagactgc tgggggaaag gagagaggac tgactatctt ccatgggaaa cctagaagaa
     1021 cccagactct tccagaagga gtgggatgga atcaccacac tgcgctcctg ggagctggga
     1081 cccttgtagg agtctctgga gaggccatga gaaatcagga ttcctccagg ctccatgctt
     1141 tccagaggca ccatctaaat gttatcccga atgtcctcgg tccccacctc ccaactgtag
     1201 cagctgaagg tccgtggttt cctgtaattg gtctccactg ctcaggccat ttgaaggagg
     1261 cacctcaggg ctcagatgtg gagggaacta ccttcaaaat acagtatttg atttatatag
     1321 ttgtaataac tttaacacat cacaaatgtt attgaaatat tagtatatgt tatattatta
     1381 ataatcctta tcgttatatg ttgactacag aataattagc atattaaata tttaatgata
     1441 gttcctgttt tgagaatgcc gtttttatat tttataatgc ctctcataat gtttatatat
     1501 acatagatat ttcactcact agaggatttt tatttttttt atctattata tttctttttt
     1561 atctattata cttatgtgtc tatttgtctt acatctaggt aatataacct tagatcatta
     1621 tgaatatgtt tttatttctt tgatatttcc tctccattat tgaatgtgac tattgagctg
     1681 tggtactttc aaccacttga acatgtttgc atattacttt caagagggct tgtgtttaaa
     1741 agagaatcca tgttacaagc tccttgcact gtggacagac aataaagatg aaatgtgttt
     1801 cattttctat atgtaagct
//
