LOCUS       NM_027649               1160 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus spermatogenesis associated, serine-rich 1 (Spats1),
            transcript variant 1, mRNA.
ACCESSION   NM_027649 XM_001002595
VERSION     NM_027649.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1160)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 1160)
  AUTHORS   Capoano,C.A., Ortiz-Laquintana,L.A., Rodriguez-Casuriaga,R.,
            Schlapp,G., Meikle,M.N., Mulet,A.P., Crispo,M., Benavente,R. and
            Geisinger,A.
  TITLE     SPATS1 (spermatogenesis-associated, serine-rich 1) is not essential
            for spermatogenesis and fertility in mouse
  JOURNAL   PLoS One 16 (5), e0251028 (2021)
   PUBMED   33945571
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 1160)
  AUTHORS   Koscielny,G., Yaikhom,G., Iyer,V., Meehan,T.F., Morgan,H.,
            Atienza-Herrero,J., Blake,A., Chen,C.K., Easty,R., Di Fenza,A.,
            Fiegel,T., Grifiths,M., Horne,A., Karp,N.A., Kurbatova,N.,
            Mason,J.C., Matthews,P., Oakley,D.J., Qazi,A., Regnart,J.,
            Retha,A., Santos,L.A., Sneddon,D.J., Warren,J., Westerberg,H.,
            Wilson,R.J., Melvin,D.G., Smedley,D., Brown,S.D., Flicek,P.,
            Skarnes,W.C., Mallon,A.M. and Parkinson,H.
  TITLE     The International Mouse Phenotyping Consortium Web Portal, a
            unified point of access for knockout mice and related phenotyping
            data
  JOURNAL   Nucleic Acids Res 42 (Database issue), D802-D809 (2014)
   PUBMED   24194600
REFERENCE   4  (bases 1 to 1160)
  AUTHORS   Geisinger,A., Dos Santos,A., Benavente,R. and Wettstein,R.
  TITLE     Identification and characterization of SRSP1, a rat gene
            differentially expressed during spermatogenesis and coding for a
            serine stretch-containing protein
  JOURNAL   Cytogenet Genome Res 98 (4), 249-254 (2002)
   PUBMED   12826748
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK005865.1, AK016586.1, BC131909.1 and AV045867.2.
            
            On Mar 13, 2008 this sequence version replaced NM_027649.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK005865.1, BC131909.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384, SAMN01164131
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-306               AK005865.1         2-307
            307-726             AK016586.1         234-653
            727-747             AK005865.1         728-748
            748-748             BC131909.1         708-708
            749-954             AK005865.1         750-955
            955-963             AV045867.2         97-105
            964-1152            AK005865.1         965-1153
            1153-1160           AV045867.2         295-302
FEATURES             Location/Qualifiers
     source          1..1160
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="17"
                     /map="17 22.44 cM"
     gene            1..1160
                     /gene="Spats1"
                     /gene_synonym="1700011H05Rik; 4933400B06Rik; Ddip; Srsp1"
                     /note="spermatogenesis associated, serine-rich 1"
                     /db_xref="GeneID:71020"
                     /db_xref="MGI:MGI:1918270"
     exon            1..140
                     /gene="Spats1"
                     /gene_synonym="1700011H05Rik; 4933400B06Rik; Ddip; Srsp1"
                     /inference="alignment:Splign:2.1.0"
     CDS             125..934
                     /gene="Spats1"
                     /gene_synonym="1700011H05Rik; 4933400B06Rik; Ddip; Srsp1"
                     /note="isoform 1 is encoded by transcript variant 1;
                     spermatogenesis-associated serine-rich protein 1; dvl2-DEP
                     domain-interacting protein"
                     /codon_start=1
                     /product="spermatogenesis-associated serine-rich protein 1
                     isoform 1"
                     /protein_id="NP_081925.2"
                     /db_xref="CCDS:CCDS50118.1"
                     /db_xref="GeneID:71020"
                     /db_xref="MGI:MGI:1918270"
                     /translation="MESSKDTQHGDALESKSCLANRTSSRQNKRTSLSSSDGTGPRVT
                     ESLGLPRVLTPSDTAAELGQKTSSSSSSSSSSAQSNRSSKVSLPEIPKEKYPEEFSLL
                     NSQTEDGQRPEWTFYPRFSSNIHTYHIGKQCFFNGVFRGNRRSVAERTVDNSLGKKKY
                     DIDPRNGIPKLTPGDNPYMFPEQSKEFFKAGATLPPVNFSLGPYEKKFDTFIPLEPLP
                     KIPNLPFWEKEKANNLKNEIKEVEELDNWQVPMPFLHGFFSTGASNFSRQQ"
     exon            141..294
                     /gene="Spats1"
                     /gene_synonym="1700011H05Rik; 4933400B06Rik; Ddip; Srsp1"
                     /inference="alignment:Splign:2.1.0"
     exon            295..443
                     /gene="Spats1"
                     /gene_synonym="1700011H05Rik; 4933400B06Rik; Ddip; Srsp1"
                     /inference="alignment:Splign:2.1.0"
     exon            444..605
                     /gene="Spats1"
                     /gene_synonym="1700011H05Rik; 4933400B06Rik; Ddip; Srsp1"
                     /inference="alignment:Splign:2.1.0"
     exon            606..726
                     /gene="Spats1"
                     /gene_synonym="1700011H05Rik; 4933400B06Rik; Ddip; Srsp1"
                     /inference="alignment:Splign:2.1.0"
     exon            727..789
                     /gene="Spats1"
                     /gene_synonym="1700011H05Rik; 4933400B06Rik; Ddip; Srsp1"
                     /inference="alignment:Splign:2.1.0"
     exon            790..905
                     /gene="Spats1"
                     /gene_synonym="1700011H05Rik; 4933400B06Rik; Ddip; Srsp1"
                     /inference="alignment:Splign:2.1.0"
     exon            906..1160
                     /gene="Spats1"
                     /gene_synonym="1700011H05Rik; 4933400B06Rik; Ddip; Srsp1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcgttgtcct ggcaaccctg gaccgagcct tgcaggcggt ggtagacgcc cttgctttcg
       61 ctttgcatcc tggtatttgg cagttccgct gccagttggt gcgttgatct gggccacatc
      121 ctccatggag tcttccaagg atacccagca cggtgatgct ctagaatcta aaagttgctt
      181 ggctaacagg acgtcctctc gtcagaacaa aaggaccagc ctctcgtctt ctgacggaac
      241 aggtccgaga gtcactgagt ccctaggcct tcccagggtg ttgactccct ctgacacggc
      301 tgcggagctg ggtcagaaga cctcctcctc ttcgtcttcc tcctcttcct ctgctcagtc
      361 taatcgttcc tcaaaagttt cgctgcctga aatcccaaag gaaaaatatc ccgaggaatt
      421 cagcctgctc aattcacaga cagaagatgg gcagcgtcct gagtggacat tttatccaag
      481 gttcagcagc aacatccaca cctaccacat tggaaagcag tgcttcttca atggggtctt
      541 ccggggcaac aggaggtctg tggcagagag gacagtggac aacagcctcg ggaagaagaa
      601 atacgatatt gatcccagaa atggaatccc caaattgaca ccaggggata atccgtacat
      661 gttcccagaa cagagtaaag agttcttcaa agcgggagca actttgcctc cggtgaactt
      721 ctcactggga ccttacgaga aaaaattcga cacatttatc ccacttgagc cacttccaaa
      781 aattcccaat ctgcctttct gggagaagga aaaagccaac aatttgaaga acgagataaa
      841 agaagtcgag gagcttgaca actggcaggt gccgatgccc ttcctacatg gtttcttctc
      901 cactggtgct tccaactttt caagacaaca atgagcagag acattgagcc cccaagcatt
      961 cgctgactgc cctcccagcc agcctctgcc attgctgggt gtttttattc tttgcttttg
     1021 acattgtctc tgtcctaaac catttgtttg actcgaatga ggaatcacta tgtttggcct
     1081 tgttgaacac tcaactgtga aaactttcaa gatgtgtaga aaagttgcac tgattataaa
     1141 gcagacacct gggtgccctc
//
