LOCUS       NM_029336                432 bp    mRNA    linear   ROD 12-OCT-2024
DEFINITION  Mus musculus spermatogenesis associated 45 (Spata45), transcript
            variant 2, mRNA.
ACCESSION   NM_029336 XM_886605 XM_909947
VERSION     NM_029336.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 432)
  AUTHORS   Suzuki,A., Yabuta,N., Shimada,K., Mashiko,D., Tokuhiro,K.,
            Oyama,Y., Miyata,H., Garcia,T.X., Matzuk,M.M. and Ikawa,M.
  TITLE     Individual disruption of 12 testis-enriched genes via the
            CRISPR/Cas9 system does not affect the fertility of male mice
  JOURNAL   J Reprod Immunol 163, 104252 (2024)
   PUBMED   38697008
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC138229.16.
            
            On Apr 2, 2020 this sequence version replaced NM_029336.1.
            
            Transcript Variant: This variant (2) differs in the 5' UTR compared
            to variant 1. Variants 1 and 2 both encode the same protein.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CA466331.1, BY706337.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-56                AC138229.16        64456-64511
            57-368              AC138229.16        67182-67493
            369-432             AC138229.16        70516-70579
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="1"
                     /map="1 96.28 cM"
     gene            1..432
                     /gene="Spata45"
                     /gene_synonym="1700022P22Rik"
                     /note="spermatogenesis associated 45"
                     /db_xref="GeneID:75558"
                     /db_xref="MGI:MGI:1922808"
     exon            1..56
                     /gene="Spata45"
                     /gene_synonym="1700022P22Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            57..368
                     /gene="Spata45"
                     /gene_synonym="1700022P22Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             95..388
                     /gene="Spata45"
                     /gene_synonym="1700022P22Rik"
                     /note="UPF0732 protein C1orf227 homolog"
                     /codon_start=1
                     /product="spermatogenesis-associated protein 45"
                     /protein_id="NP_083612.1"
                     /db_xref="CCDS:CCDS48483.1"
                     /db_xref="GeneID:75558"
                     /db_xref="MGI:MGI:1922808"
                     /translation="MTSMNKGNEEKTQGANRKQLLEELNEKRESYCLVERSNEVNLLR
                     VQKRHFSKAYQTLACMHIKESVPESTRTSWVKHDLSVHKEKRHFLPKNNAIFG"
     exon            369..432
                     /gene="Spata45"
                     /gene_synonym="1700022P22Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      411..416
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Spata45"
                     /gene_synonym="1700022P22Rik"
                     /note="hexamer: AATAAA"
     polyA_site      432
                     /gene="Spata45"
                     /gene_synonym="1700022P22Rik"
                     /note="major polyA site"
ORIGIN      
        1 agtgggctga tcctcactgt ggacttcaga caggctttgg gttggtgtta ttaaagggcg
       61 gcaagactca gctgaccact ggtgtgttgt aaagatgaca tccatgaaca agggcaacga
      121 agagaagaca cagggagcga acaggaagca gcttctggaa gagttgaacg agaagcgcga
      181 gtcctactgc ctggtggaaa gaagcaacga agtcaacctg ctgagagttc agaagaggca
      241 cttcagcaag gcctaccaga ccttagcttg catgcatatc aaagaatctg ttcccgaaag
      301 taccaggacc tcctgggtca agcatgatct ctctgtgcac aaggagaaaa ggcactttct
      361 gccaaaaaat aatgccatat ttggatgaag tatatctcca gagacacaca aataaactct
      421 ctttcatcag tc
//
