LOCUS       NM_177279                518 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Mus musculus spermatogenesis associated 33 (Spata33), mRNA.
ACCESSION   NM_177279
VERSION     NM_177279.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 518)
  AUTHORS   Zhang,Y.
  TITLE     SPATA33 affects the formation of cell adhesion complex by
            interacting with CTNNA3 in TM4 cells
  JOURNAL   Cell Tissue Res 389 (1), 145-157 (2022)
   PUBMED   35536443
  REMARK    GeneRIF: SPATA33 affects the formation of cell adhesion complex by
            interacting with CTNNA3 in TM4 cells.
REFERENCE   2  (bases 1 to 518)
  AUTHORS   Miyata,H., Oura,S., Morohoshi,A., Shimada,K., Mashiko,D., Oyama,Y.,
            Kaneda,Y., Matsumura,T., Abbasi,F. and Ikawa,M.
  TITLE     SPATA33 localizes calcineurin to the mitochondria and regulates
            sperm motility in mice
  JOURNAL   Proc Natl Acad Sci U S A 118 (35) (2021)
   PUBMED   34446558
REFERENCE   3  (bases 1 to 518)
  AUTHORS   Zhang,Y., Xu,X., Hu,M., Wang,X., Cheng,H. and Zhou,R.
  TITLE     SPATA33 is an autophagy mediator for cargo selectivity in germline
            mitophagy
  JOURNAL   Cell Death Differ 28 (3), 1076-1090 (2021)
   PUBMED   33087875
  REMARK    GeneRIF: SPATA33 is an autophagy mediator for cargo selectivity in
            germline mitophagy.
REFERENCE   4  (bases 1 to 518)
  AUTHORS   Chen,H., Yi,M., Sheng,Y., Cheng,H. and Zhou,R.
  TITLE     A novel testis-enriched gene Spata33 is expressed during
            spermatogenesis
  JOURNAL   PLoS One 8 (7), e67882 (2013)
   PUBMED   23844118
  REMARK    GeneRIF: Results indicate that Spata33 was predominantly expressed
            in the testis and associated with spermatogenesis.
            Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC163617.5 and AK076656.1.
            
            On Mar 31, 2007 this sequence version replaced NM_177279.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BU961217.1, CN837447.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849381, SAMN00849382
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-26                AC163617.5         38917-38942         c
            27-517              AK076656.1         3-493
            518-518             AC163617.5         29755-29755         c
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="8"
                     /map="8 72.08 cM"
     gene            1..518
                     /gene="Spata33"
                     /gene_synonym="4732415M23Rik"
                     /note="spermatogenesis associated 33"
                     /db_xref="GeneID:320869"
                     /db_xref="MGI:MGI:2444920"
     exon            1..140
                     /gene="Spata33"
                     /gene_synonym="4732415M23Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             104..502
                     /gene="Spata33"
                     /gene_synonym="4732415M23Rik"
                     /codon_start=1
                     /product="spermatogenesis-associated protein 33"
                     /protein_id="NP_796253.2"
                     /db_xref="CCDS:CCDS40510.1"
                     /db_xref="GeneID:320869"
                     /db_xref="MGI:MGI:2444920"
                     /translation="MGQSKSKPREKKEEEKSTTTLVTKSKEKVMEKEAKQSDKESQPA
                     ESLLFATSKHSRPSSSSEDKPETKQRSSKKRSVIPQIIITRASNETLISYGIPDNDEQ
                     RTIREHADWGPYHRHRSPSTIAAYDVHNTE"
     exon            141..290
                     /gene="Spata33"
                     /gene_synonym="4732415M23Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            291..518
                     /gene="Spata33"
                     /gene_synonym="4732415M23Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      498..503
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Spata33"
                     /gene_synonym="4732415M23Rik"
                     /note="hexamer: AATAAA"
     polyA_site      518
                     /gene="Spata33"
                     /gene_synonym="4732415M23Rik"
                     /note="major polyA site"
ORIGIN      
        1 cgcggttgcc atggtaatga gctcccggag cctagtgtgg gttttgtgag tcggtcgggt
       61 taaccggccc cgaggccgcc cggctggagc ggcggggtca cctatgggcc agtcgaaaag
      121 caaacccaga gagaagaaag aggaggagaa gagcactacc actttagtta caaagtctaa
      181 ggagaaagta atggagaagg aggccaagca gtctgacaag gagtcgcagc ctgccgaaag
      241 cctgttgttc gcgacatcca agcactcaag gccgtcgtct tcgtctgaag acaaacctga
      301 gacaaagcaa aggtcaagca agaagagaag tgtcatcccg cagatcatca tcacccgggc
      361 ctccaacgag acgctaatca gctacggcat ccccgacaac gatgaacaga gaaccattcg
      421 ggagcatgcc gactggggtc cttaccaccg acacaggagc cccagcacaa tagcagccta
      481 tgatgtacac aacacagaat aaatgagagc tctcggta
//
