LOCUS       NM_001356379            1690 bp    mRNA    linear   ROD 05-AUG-2023
DEFINITION  Mus musculus spermatogenesis associated 31 subfamily F member 3
            (Spata31f3), transcript variant 2, mRNA.
ACCESSION   NM_001356379 XM_006537972
VERSION     NM_001356379.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1690)
  AUTHORS   Skarnes WC, Rosen B, West AP, Koutsourakis M, Bushell W, Iyer V,
            Mujica AO, Thomas M, Harrow J, Cox T, Jackson D, Severin J, Biggs
            P, Fu J, Nefedov M, de Jong PJ, Stewart AF and Bradley A.
  TITLE     A conditional knockout resource for the genome-wide study of mouse
            gene function
  JOURNAL   Nature 474 (7351), 337-342 (2011)
   PUBMED   21677750
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK133100.1, AK077002.1 and AL772334.17.
            
            [WARNING] On Nov 29, 2023 this sequence was replaced by
            NM_001356379.2.
            
            On Oct 4, 2017 this sequence version replaced XM_006537972.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC049635.1, SRR5189685.195326.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-31                AK133100.1         2-32
            32-942              AK077002.1         2-912
            943-945             AL772334.17        154457-154459       c
            946-1690            AK077002.1         913-1657
FEATURES             Location/Qualifiers
     source          1..1690
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 22.88 cM"
     gene            1..1690
                     /gene="Spata31f3"
                     /gene_synonym="4931430D02; Fam205c; FAM205CP"
                     /note="spermatogenesis associated 31 subfamily F member 3"
                     /db_xref="GeneID:277773"
                     /db_xref="MGI:MGI:2679716"
     exon            1..212
                     /gene="Spata31f3"
                     /gene_synonym="4931430D02; Fam205c; FAM205CP"
                     /inference="alignment:Splign:2.1.0"
     CDS             69..1184
                     /gene="Spata31f3"
                     /gene_synonym="4931430D02; Fam205c; FAM205CP"
                     /note="isoform 2 is encoded by transcript variant 2;
                     transmembrane protein ENSP00000340100 homolog; protein
                     FAM205CP homolog; family with sequence similarity 205,
                     member C; protein SPATA31F3"
                     /codon_start=1
                     /product="protein SPATA31F3 isoform 2"
                     /protein_id="NP_001343308.1"
                     /db_xref="CCDS:CCDS89730.1"
                     /db_xref="GeneID:277773"
                     /db_xref="MGI:MGI:2679716"
                     /translation="MMVPSFILWDVGSSVYTYGSLFIIALIIWHVRRSHRGLRLGPIK
                     SCTKCFRRIKQKPSDRTLRVKKRTTKEETEKLQKLLSNMKRQGWLPQEGSVRRLLCSD
                     PSCPICNAMALEIQQLLGVENKKTSSSLLRHSRSFSCLEALSPPKVLNDQSSELSKVL
                     NGQSSELSKVLNGQSSELSKVLNDQSSELSKVLNDQSSELSSQHSKDISLPPKFMQSQ
                     STDQKLTLSAPLSTGNTVLQCYHPAPQQQPEPQGSNAFQDVSGLSSSSMDEHGVPANQ
                     QKKRKKTKKLVSKNQAAPSEAEMENKMTFFSHWVNPEVKCDRPEESFAFYKSETGAKP
                     KTGEPKKSSAKVRAEEPNLEKHAKDLKAKPLHAKRNI"
     exon            213..258
                     /gene="Spata31f3"
                     /gene_synonym="4931430D02; Fam205c; FAM205CP"
                     /inference="alignment:Splign:2.1.0"
     exon            259..322
                     /gene="Spata31f3"
                     /gene_synonym="4931430D02; Fam205c; FAM205CP"
                     /inference="alignment:Splign:2.1.0"
     exon            323..942
                     /gene="Spata31f3"
                     /gene_synonym="4931430D02; Fam205c; FAM205CP"
                     /inference="alignment:Splign:2.1.0"
     exon            943..1690
                     /gene="Spata31f3"
                     /gene_synonym="4931430D02; Fam205c; FAM205CP"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agaactcagg ggcattgcat tctaacaccc tggaagccca ggggagggat gagtaggaaa
       61 gtcggataat gatggtccct tcttttattc tgtgggatgt gggatcctcg gtatatacat
      121 atggatctct cttcattatt gcattgatta tttggcatgt gagaaggagc caccgaggat
      181 taaggttggg acctatcaag agctgtacca agtgtttccg aagaatcaag caaaagccta
      241 gtgatagaac gctaagagtt aagaagagga caaccaagga agaaactgag aaactgcaga
      301 agctgctctc taacatgaaa agacagggct ggctccctca agaaggaagt gtgcgacgac
      361 tcctgtgctc agatccatcc tgccccatct gcaatgccat ggctctggaa attcagcagt
      421 tgctgggggt tgagaacaaa aagacctctt ccagtctact gaggcactcc cgcagctttt
      481 cttgtctgga ggcattgtct ccacccaaag tgttgaatga ccagagttca gagctctcca
      541 aagtgttgaa tggccagagt tcagagctct ccaaagtgtt gaatggccag agttcagagc
      601 tctccaaagt gttgaatgac cagagttcag agctctccaa agtgttgaat gaccagagtt
      661 cagagctcag ttcccaacac tccaaagaca tttcattgcc acccaagttc atgcagtcac
      721 aatcaacaga tcagaaattg actctgtcag ctcctctgtc cactggcaac actgtcctcc
      781 agtgttacca ccctgctcct cagcaacagc cggaacctca agggtcaaat gcgttccagg
      841 atgtaagcgg tctgtcatct tcaagtatgg acgagcatgg ggtgcctgca aaccaacaaa
      901 agaagaggaa gaaaaccaag aaacttgtct cgaagaacca agcagcgccc tcagaagctg
      961 aaatggaaaa caagatgacg ttcttttctc actgggttaa ccctgaagtg aaatgcgaca
     1021 gaccggagga atcctttgcc ttctataagt ctgagacagg ggccaaaccc aagactggag
     1081 agcccaagaa gagttctgcc aaagtccgag cagaggaacc caacctggag aaacatgcaa
     1141 aagatctcaa agccaagcct ctccatgcta agaggaacat ttgactttcc tggacaccta
     1201 cagtgtcttc agagttccag caacatccct tctgcacaac caatcctggg ccccatggct
     1261 actcccacaa ctgcttcaaa actgtctacg attagtgtca accagctagg aaaccaatgt
     1321 cagctctcct ctcagaaggt cctggtttac acagaggata agcacgtcaa gcaagcaggc
     1381 tcccaaagct ctgcatcgcc cccaacaaag gctgtcaccc gtcatttcta cttctaagca
     1441 agtatgccat gagattctcc aaatatactc tatacctata aagcaaagaa cctcctgcat
     1501 tttctttttg ttttcagtgc cacatgtagg aaaagttctc tgtgtggtat gggtgcttaa
     1561 atctgctttc attttgatgg gtcagcatat atatcatata aacatatcct atgggtaaag
     1621 ggacttgagt ggagaatgga ggcctcttgt ttaaggtcca ccgaagatag aaataaatct
     1681 tgacttccca
//
