LOCUS       NM_001357589            4147 bp    mRNA    linear   ROD 28-JUL-2024
DEFINITION  Mus musculus spermatogenesis associated 31 subfamily F member 1C
            (Spata31f1c), mRNA.
ACCESSION   NM_001357589 XM_011250142
VERSION     NM_001357589.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 4147)
  AUTHORS   Church,D.M., Goodstadt,L., Hillier,L.W., Zody,M.C., Goldstein,S.,
            She,X., Bult,C.J., Agarwala,R., Cherry,J.L., DiCuccio,M.,
            Hlavina,W., Kapustin,Y., Meric,P., Maglott,D., Birtle,Z.,
            Marques,A.C., Graves,T., Zhou,S., Teague,B., Potamousis,K.,
            Churas,C., Place,M., Herschleb,J., Runnheim,R., Forrest,D.,
            Amos-Landgraf,J., Schwartz,D.C., Cheng,Z., Lindblad-Toh,K.,
            Eichler,E.E. and Ponting,C.P.
  CONSRTM   Mouse Genome Sequencing Consortium
  TITLE     Lineage-specific biology revealed by a finished genome assembly of
            the mouse
  JOURNAL   PLoS Biol 7 (5), e1000112 (2009)
   PUBMED   19468303
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL844494.42, AI552279.1 and AI429787.1.
            
            On Nov 4, 2017 this sequence version replaced XM_011250142.1.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR1660811.102849.1,
                                           SRR10662774.3572774.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849381, SAMN00849382
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-60                AL844494.42        91580-91639         c
            61-271              AL844494.42        77056-77266         c
            272-332             AL844494.42        66557-66617         c
            333-3425            AL844494.42        62818-65910         c
            3426-3638           AI552279.1         1-213
            3639-3639           AL844494.42        62604-62604         c
            3640-3793           AI552279.1         215-368
            3794-3945           AI552279.1         370-521
            3946-4002           AI429787.1         150-206             c
            4003-4003           AL844494.42        62240-62240         c
            4004-4147           AI429787.1         5-148               c
FEATURES             Location/Qualifiers
     source          1..4147
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4"
     gene            1..4147
                     /gene="Spata31f1c"
                     /gene_synonym="Fam205a; Fam205a3; Gm21598; Spata31f1-3"
                     /note="spermatogenesis associated 31 subfamily F member
                     1C"
                     /db_xref="GeneID:100862261"
                     /db_xref="MGI:MGI:5434953"
     exon            1..60
                     /gene="Spata31f1c"
                     /gene_synonym="Fam205a; Fam205a3; Gm21598; Spata31f1-3"
                     /inference="alignment:Splign:2.1.0"
     exon            61..271
                     /gene="Spata31f1c"
                     /gene_synonym="Fam205a; Fam205a3; Gm21598; Spata31f1-3"
                     /inference="alignment:Splign:2.1.0"
     exon            272..332
                     /gene="Spata31f1c"
                     /gene_synonym="Fam205a; Fam205a3; Gm21598; Spata31f1-3"
                     /inference="alignment:Splign:2.1.0"
     CDS             325..4008
                     /gene="Spata31f1c"
                     /gene_synonym="Fam205a; Fam205a3; Gm21598; Spata31f1-3"
                     /note="protein FAM205A; protein FAM205A-3; family with
                     sequence similarity 205, member A3; protein SPATA31F1-3"
                     /codon_start=1
                     /product="spermatogenesis-associated protein 31F1C"
                     /protein_id="NP_001344518.1"
                     /db_xref="GeneID:100862261"
                     /db_xref="MGI:MGI:5434953"
                     /translation="MKSQSWVPKQGNVRQLLCLDPSCQICEATTLEIRQLLQSKKSQI
                     SPALLGLPQRAACLEMPISSESFEWNQDFYSRYSTNSPVVPGNQTLTQLTEELTESTN
                     ADGVLLCWTDPLQIGQEFHLADMPMASETLVSPGLEEPVVLMNEEDTVHSNLNYIQQL
                     QDHEALNSQIPFQTLTPQLTVTHPMAVSIVTDAPQPFLSPEVLRLLEIHVKKLMHFQR
                     WGLPRRVEESLKQFMPNPPVYLPPEHNQPVSFILNTSSQDCVHRFEGISPETWYSYMD
                     GQPIQTFWVSEWSSGDQGQRLSCKPIPSPVEKPLLTPDYELLHDLCLSPEGQVDGSQS
                     NLQKKFTQLFCGLPSMHSESLGSTFLCTQGVSKNTLKPPYKEPHFLKVSPPIPLPEAA
                     PPPSSTSPNESLDEPQRAQIGGVPFLTLSECKTLEWHLLQRQLQLQWGLPAVIARPPR
                     VQSHTQYKHKPWNKAKPRETLKFFGPGKPFSALTRELFFIPQHARRLLEFHLQKRLIH
                     LRWGLPQRIQRSINMLLSSTDLQSLPCGGSRLPNVSISQPGKPEAYGSGDTFLPTAGK
                     GTTPMPHLFAKAQEMLKSHDTKCEQIREGKVPACVQSAWKGRIPGDLAAGTLFPNIPQ
                     GQPLELQAENNPDLHQEAVSWKPMDLDQEAQAFSGVFIEHCRRPQALSEETIKKLETT
                     LRHKYLAFLSGLQALYCMAPTKATSPTVDQSVITTMPWSVKSPQKPLSQKSPLEALCL
                     SGLEPCTQDDKETSANIAEEFQHGAQGHGRTEKVPPERQPLLNRPYSLDTEIMERVSF
                     YLKRKALDIKLGISLKESVFQEPTATDLESESVQEPLGSPRESTLLQGPPTLCHVPVA
                     PDPDKVCLKQPATAVQVVFQEQNQPSSRAVPHRSARQGSQVHRNMMEAQVHYVQMGTG
                     GEMLNLGEPFSTESQSPGKSKSGYVPTVAGKRKIPGKPKVVGDLGEGDAGLGFSLVSL
                     KTRQDGEQEKRLLHRQLQGSSLQAQTFHLEGACPHSPQESPELQFADPPPEVFMETDS
                     EQDMEDSQSKESIVPEPARTAKAPQPMLSRASQGLPFPRSPTQRKPSQGQPGPGHVPP
                     GHATPASPYTRPSRLPEAGLKNKMKLFFHSIKLKMKSKAHTEPSTVSTPGKVAKTSKE
                     NIDRGLPQAKSPTKKTKPEDFRGPKAQFSVVGPCLTPSYILDSKFWPRPRRVGSVSVL
                     GHSYHCPRHCPRLAYANQQRNPP"
     exon            333..4147
                     /gene="Spata31f1c"
                     /gene_synonym="Fam205a; Fam205a3; Gm21598; Spata31f1-3"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gatctactgg ggctgcttct acttttttcc tcggttgcga atgtggcgca gggagcggag
       61 accttcttga cataaaggca tgtcagcttc tggcagtacc ccattctatt tcaaagaaga
      121 tgatgagcat caagaatctc caaccggagt ttgcctcaat gtggcaagct gccacagggc
      181 agagagttgc ccataattca actacagaca taatgctgtt cagaaaggac aaacaggctc
      241 agggacatct gccaagctct gccaagagag gccaggagac tttcccgaga agaagatgag
      301 aagccatgcg agctgctctc tatcatgaaa agccaaagct gggtccccaa gcagggaaat
      361 gtgcggcagc tcctgtgttt agatcccagc tgccaaatct gtgaggctac gactctagag
      421 attcggcagt tgctgcagag taagaaaagc cagatctccc ctgccttgtt gggactgcca
      481 cagagagccg cttgcctgga gatgcccata tccagtgagt cttttgaatg gaatcaggat
      541 ttttactcca ggtactccac aaactctcca gtggtgcctg gaaaccaaac actcacacag
      601 ctaacagaag agttaacaga gtctaccaat gcagatggtg tcctgctttg ctggactgat
      661 cccctccaga taggacagga atttcatctg gcagacatgc ccatggcctc tgagacactg
      721 gtttctccag ggcttgagga gccagtggtt ttaatgaatg aggaagacac agtgcacagc
      781 aatttaaact atatccagca gctccaagac catgaggcat tgaactcaca gattcctttt
      841 cagaccctga ccccacagct tactgtcaca catcctatgg ctgtgtcgat tgtcaccgat
      901 gccccgcagc cattcctcag tccggaagta ttaaggcttt tggagataca tgtgaaaaaa
      961 ctgatgcatt tccaaaggtg ggggctcccc agacgtgtag aggagtccct aaagcaattc
     1021 atgccaaacc caccagtgta tctcccgcca gaacataacc aaccagtttc atttatcctg
     1081 aatactagct ctcaagactg tgttcatagg tttgagggta tttcgcccga gacctggtac
     1141 tcatatatgg atggacaacc tatccagacc ttttgggttt ctgagtggtc tagtggtgac
     1201 caaggacaaa gactatcctg caaaccaatc cctagccctg tggaaaagcc cttactcact
     1261 cctgactatg aacttttaca tgacctctgt ctatcgcctg agggacaagt tgatggctcc
     1321 cagagcaatc ttcagaagaa attcactcag ttattctgcg gtctcccttc tatgcatagt
     1381 gaatccttgg ggtccacctt cttgtgcact caaggtgtct ccaagaatac actcaaaccc
     1441 ccctacaaag agcctcattt cttgaaggtg tccccaccta ttcccttacc tgaggcagcc
     1501 ccgccccctt cttcaacttc tccaaatgag tctttggatg agcctcaaag agctcagatc
     1561 ggtggtgttc catttctgac tctgtcagaa tgtaaaactt tggagtggca tcttctacaa
     1621 agacagcttc agcttcagtg gggcctgccg gctgtcatcg ctagacctcc acgtgtgcag
     1681 agccacacgc agtataagca taagccatgg aataaagcca agccacgtga gactttaaaa
     1741 tttttcgggc caggaaaacc cttctcagct ctcaccagag agcttttctt catccctcag
     1801 cacgctcgca ggctgctgga attccacctg cagaagcggc tgattcacct tcgctggggg
     1861 ctgccccaga ggatccagcg ctccataaat atgctgctct cctcaacaga cctgcagtcc
     1921 ctgccctgcg gtggcagtag gctacctaat gtgagcatct cacagccagg gaaaccagag
     1981 gcctatgggt ctggtgatac gttcttaccc acagcgggca aaggaacaac ccccatgcca
     2041 cacttgtttg ccaaggcaca ggaaatgttg aaaagccatg ataccaaatg tgaacagatc
     2101 cgggagggca aggtcccggc ctgtgtccaa agcgcctgga aaggcagaat tcctggggat
     2161 ttggcagcag ggactttatt cccaaacatt ccacaaggtc agcccctgga gcttcaggca
     2221 gaaaacaacc ctgacctaca tcaagaagct gtttcctgga aaccaatgga ccttgaccag
     2281 gaggctcagg ccttttcagg tgttttcatt gaacactgta ggcgacccca agccctgtct
     2341 gaggaaacca ttaagaaact ggagacaact ctgagacata agtatttggc cttcctgtca
     2401 ggcctgcagg ccctttactg catggcccca actaaagcaa catccccaac tgttgaccaa
     2461 tctgtaatca caactatgcc ctggtctgtc aaaagcccac agaagcccct atctcagaag
     2521 tctccacttg aagccctatg cctgagtggg cttgagccct gtactcaaga tgacaaggag
     2581 acttctgcaa acattgcaga agagttccag catggagctc aggggcatgg aaggacagag
     2641 aaggtgcctc cagagagaca gcctctcctg aatagaccct actcattaga cacagagatc
     2701 atggagagag tgagtttcta cctgaaaagg aaggctctgg atataaagtt gggaatttct
     2761 ctaaaagaga gtgtgttcca agagccaact gcaacagact tggagagtga atctgttcag
     2821 gagcctctcg ggagtccacg ggaaagcaca ctgctacagg gaccgcccac cttatgtcac
     2881 gttcctgtag ccccagatcc agataaggtc tgccttaaac agccagctac tgcagtgcag
     2941 gttgtgtttc aggagcaaaa ccaaccgagt tccagagcag tgccccatag atctgcccgg
     3001 cagggctcac aagtccacag gaatatgatg gaggcccaag tgcactatgt tcagatgggg
     3061 accggtgggg aaatgctgaa cctaggggaa ccctttagca ctgagtccca aagcccaggc
     3121 aagagtaagt caggctatgt ccctacagtg gcaggcaaga gaaaaatccc agggaaaccc
     3181 aaggtcgtgg gggaccttgg agaaggggac gcaggtcttg gattttccct ggtcagtcta
     3241 aagacacgcc aggatggaga gcaggagaag aggctcctgc acagacaact ccagggctcc
     3301 tcactacagg cccaaacctt tcatcttgag ggtgcctgtc cacacagccc ccaggagtcc
     3361 cctgagctcc agttcgcaga tccacctcca gaagtcttca tggagacaga ctctgagcag
     3421 gacatggaag acagtcaaag caaggaatcc attgtcccag aacctgcgag gactgctaaa
     3481 gccccccagc ctatgctctc ccgggcttcc cagggccttc ctttcccacg ctcaccaact
     3541 cagagaaagc cttctcaggg ccaacctggt ccaggtcacg tcccaccagg gcatgcaacg
     3601 ccagcctctc cctacacgag acccagccgc cttccagagg ctggcttgaa aaataaaatg
     3661 aaattatttt ttcattcaat taaactcaag atgaagagca aagcacacac ggagccatcc
     3721 acggtctcta cacctggaaa ggtggccaaa accagtaaag aaaatattga taggggtctg
     3781 cctcaagcca agagccccac caagaaaaca aagccagagg acttcagagg gcccaaggcc
     3841 cagttttcag tagttggccc ctgtctaact ccttcctata ttctagacag taagttctgg
     3901 cctcgacctc gacgagttgg ctctgtctca gtactaggcc actcttacca ttgccctcgg
     3961 cactgtccta ggttggctta tgccaatcaa cagagaaacc caccctaggt cccagggttc
     4021 acatcagaaa tgttgttctg ttaatggacc ccctcctttg tatcctttaa agagaacgat
     4081 tattgttatt ttctctaatg aacaggtgga ttaaggagcc acccataata tattctgtac
     4141 ctgtaaa
//
