LOCUS       NM_001085530            4130 bp    mRNA    linear   ROD 28-JUL-2024
DEFINITION  Mus musculus spermatogenesis associated 31 subfamily F member 1B
            (Spata31f1b), transcript variant 1, mRNA.
ACCESSION   NM_001085530 XM_620023
VERSION     NM_001085530.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 4130)
  AUTHORS   Harrow,J.L., Steward,C.A., Frankish,A., Gilbert,J.G.,
            Gonzalez,J.M., Loveland,J.E., Mudge,J., Sheppard,D., Thomas,M.,
            Trevanion,S. and Wilming,L.G.
  TITLE     The Vertebrate Genome Annotation browser 10 years on
  JOURNAL   Nucleic Acids Res 42 (Database issue), D771-D779 (2014)
   PUBMED   24316575
REFERENCE   2  (bases 1 to 4130)
  AUTHORS   Girard,A., Sachidanandam,R., Hannon,G.J. and Carmell,M.A.
  TITLE     A germline-specific class of small RNAs binds mammalian Piwi
            proteins
  JOURNAL   Nature 442 (7099), 199-202 (2006)
   PUBMED   16751776
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BX666061.27.
            
            On Jul 25, 2007 this sequence version replaced XM_620023.4.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMN00849384,
                              SAMN02415136 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            inferred exon combination :: based on alignments, homology
            RefSeq Select criteria    :: based on expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-206               BX666061.27        91869-92074         c
            207-252             BX666061.27        91238-91283         c
            253-313             BX666061.27        90739-90799         c
            314-4130            BX666061.27        86276-90092         c
FEATURES             Location/Qualifiers
     source          1..4130
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 22.16 cM"
     gene            1..4130
                     /gene="Spata31f1b"
                     /gene_synonym="Fam205a; Fam205a2; Gm13298; Spata31f1-2"
                     /note="spermatogenesis associated 31 subfamily F member
                     1B"
                     /db_xref="GeneID:545611"
                     /db_xref="MGI:MGI:3701946"
     exon            1..206
                     /gene="Spata31f1b"
                     /gene_synonym="Fam205a; Fam205a2; Gm13298; Spata31f1-2"
                     /inference="alignment:Splign:2.1.0"
     CDS             63..3989
                     /gene="Spata31f1b"
                     /gene_synonym="Fam205a; Fam205a2; Gm13298; Spata31f1-2"
                     /note="isoform 1 is encoded by transcript variant 1;
                     Transmembrane protein C9orf144B homolog; protein FAM205A;
                     family with sequence similarity 205, member A2; protein
                     SPATA31F1-2; protein FAM205A-2; spermatogenesis-associated
                     protein 31F1B"
                     /codon_start=1
                     /product="spermatogenesis-associated protein 31F1B isoform
                     1"
                     /protein_id="NP_001078999.1"
                     /db_xref="GeneID:545611"
                     /db_xref="MGI:MGI:3701946"
                     /translation="MLSTMCFLWDTECPLYVYFCFFIIVLIVWQVRQNYQGLKCENRR
                     SCCRRHQKVRQRAKDAASRARRLSREEDEKPCELLSIMKSQSWVPKQGNVRQLLCLDP
                     SCQICEATTLEIRQLLQSKKSQISPALLGLPQRAACLEMPISSESFEWNQDFYSRYST
                     NSPVVPGNQTLTQLTEELTESTNADGVLLCWTDPLQIGQEFHLADMPMASETLVSPGL
                     EEPVVLMNEEDTVHSNLNYIQQLQDHEALNSQIPFQTLTPQLTVTHPMAVSIVTDAPQ
                     PFLSPEVLRLLEIHVKKLMHFQRWGLPRRVEESLKQFMPNPPVYLPPEHNQPVSFILN
                     TSSQDCVHRFEGISPETWYSYMDGQPIQTFWVSEWSSGDQGQRLSCKPIPSPVEKPLL
                     TPDYELLHDLCLSPEGQVDGSQSNLQKKFTQLFCGLPSMHSESLGSTFLCTQGVSKNT
                     LKPPYKEPHFLKVSPPIPLPEAAPPPSSTSPNESLDEPQRAQIGGVPFLTLSECKTLE
                     WHLLQRQLQLQWGLPAVIARPPRVQSHTQYKHKPWNKAKPRETLKFFGPGKPFSALTR
                     ELFFIPQHARRLLEFHLQKRLIHLRWGLPQRIQRSINMLLSSTDLQSLPCGGSRLPNV
                     SISQPGKPEAYGSGDTFLPTAGKGTTPMPHLFAKAQEMLKSHDTKCEQIREGKVPACV
                     QSAWKGRIPGDLAAGTLFPNIPQGQPLELQAENNPDLHQEAVSWKPMDLDQEAQAFSG
                     VFIEHCRRPQALSEETIKKLETTLRHKYLAFLSGLQALYCMAPTKATSPTVDQSVITT
                     MPWSVKSPQKPLSQKSPLEALCLSGLEPCTQDDKETSANIAEEFQHGAQGHGRTEKVP
                     PERQPLLNRPYSLDTEIMERVSFYLKRKALDIKLGISLKESVFQEPTATDLESESVQE
                     PLGSPRESTLLQGPPTLCHVPVAPDPDKVCLKQPATAVQVVFQEQNQPSSRAVPHRSA
                     RQGSQVHRNMMEAQVHYVQMGTGGEMLNLGEPFSTESQSPGKSKSGYVPTVAGKRKIP
                     GKPKVVGDLGEGDAGLGFSLVSLKTRQDGEQEKRLLHRQLQGSSLQAQTFHLEGACPH
                     SPQESPELQFADPPPEVFMETDSEQDMEDSQSKESIVPEPARTAKAPQPMLSRASQGL
                     PFPRSPTQRKPSQGQPGPGHVPPGHATPASPYTRPSRLPEAGLKNKMKLFFHSIKLKM
                     KSKAHTEPSTVSTPGKVAKTSKENIDRGLPQAKSPTKKTKPEDFRGPKAQFSVVGPCL
                     TPSYILDSKFWPRPRRVGSVSVLGHSYHCPRHCPRLAYANQQRNPP"
     exon            207..252
                     /gene="Spata31f1b"
                     /gene_synonym="Fam205a; Fam205a2; Gm13298; Spata31f1-2"
                     /inference="alignment:Splign:2.1.0"
     exon            253..313
                     /gene="Spata31f1b"
                     /gene_synonym="Fam205a; Fam205a2; Gm13298; Spata31f1-2"
                     /inference="alignment:Splign:2.1.0"
     exon            314..4130
                     /gene="Spata31f1b"
                     /gene_synonym="Fam205a; Fam205a2; Gm13298; Spata31f1-2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggactctg aatgtcctaa gagtaggatg gctggtctcc tcatgctgat gaggttcaga
       61 ccatgctgag cactatgtgc tttctgtggg acactgaatg tcccttgtat gtctatttct
      121 gcttcttcat cattgtccta attgtctggc aagtgcgtca gaattaccaa ggattgaagt
      181 gcgaaaatag aagaagctgc tgtcggcgtc atcaaaaagt caggcaaagg gctaaagatg
      241 cagcgtcaag agccaggaga ctttcccgag aagaagatga gaagccatgc gagctgctct
      301 ctatcatgaa aagccaaagc tgggtcccca agcagggaaa tgtgcggcag ctcctgtgtt
      361 tagatcccag ctgccaaatc tgtgaggcta cgactctaga gattcggcag ttgctgcaga
      421 gtaagaaaag ccagatctcc cctgccttgt tgggactgcc acagagagcc gcttgcctgg
      481 agatgcccat atccagtgag tcttttgaat ggaatcagga tttttactcc aggtactcca
      541 caaactctcc agtggtgcct ggaaaccaaa cactcacaca gctaacagaa gagttaacag
      601 agtctaccaa tgcagatggt gtcctgcttt gctggactga tcccctccag ataggacagg
      661 aatttcatct ggcagacatg cccatggcct ctgagacact ggtttctcca gggcttgagg
      721 agccagtggt tttaatgaat gaggaagaca cagtgcacag caatttaaac tatatccagc
      781 agctccaaga ccatgaggca ttgaactcac agattccttt tcagaccctg accccacagc
      841 ttactgtcac acatcctatg gctgtgtcga ttgtcaccga tgccccgcag ccattcctca
      901 gtccggaagt attaaggctt ttggagatac atgtgaaaaa actgatgcat ttccaaaggt
      961 gggggctccc cagacgtgta gaggagtccc taaagcaatt catgccaaac ccaccagtgt
     1021 atctcccgcc agaacataac caaccagttt catttatcct gaatactagc tctcaagact
     1081 gtgttcatag gtttgagggt atttcgcccg agacctggta ctcatatatg gatggacaac
     1141 ctatccagac cttttgggtt tctgagtggt ctagtggtga ccaaggacaa agactatcct
     1201 gcaaaccaat ccctagccct gtggaaaagc ccttactcac tcctgactat gaacttttac
     1261 atgacctctg tctatcgcct gagggacaag ttgatggctc ccagagcaat cttcagaaga
     1321 aattcactca gttattctgc ggtctccctt ctatgcatag tgaatccttg gggtccacct
     1381 tcttgtgcac tcaaggtgtc tccaagaata cactcaaacc cccctacaaa gagcctcatt
     1441 tcttgaaggt gtccccacct attcccttac ctgaggcagc cccgccccct tcttcaactt
     1501 ctccaaatga gtctttggat gagcctcaaa gagctcagat cggtggtgtt ccatttctga
     1561 ctctgtcaga atgtaaaact ttggagtggc atcttctaca aagacagctt cagcttcagt
     1621 ggggcctgcc ggctgtcatc gctagacctc cacgtgtgca gagccacacg cagtataagc
     1681 ataagccatg gaataaagcc aagccacgtg agactttaaa atttttcggg ccaggaaaac
     1741 ccttctcagc tctcaccaga gagcttttct tcatccctca gcacgctcgc aggctgctgg
     1801 aattccacct gcagaagcgg ctgattcacc ttcgctgggg gctgccccag aggatccagc
     1861 gctccataaa tatgctgctc tcctcaacag acctgcagtc cctgccctgc ggtggcagta
     1921 ggctacctaa tgtgagcatc tcacagccag ggaaaccaga ggcctatggg tctggtgata
     1981 cgttcttacc cacagcgggc aaaggaacaa cccccatgcc acacttgttt gccaaggcac
     2041 aggaaatgtt gaaaagccat gataccaaat gtgaacagat ccgggagggc aaggtcccgg
     2101 cctgtgtcca aagcgcctgg aaaggcagaa ttcctgggga tttggcagca gggactttat
     2161 tcccaaacat tccacaaggt cagcccctgg agcttcaggc agaaaacaac cctgacctac
     2221 atcaagaagc tgtttcctgg aaaccaatgg accttgacca ggaggctcag gccttttcag
     2281 gtgttttcat tgaacactgt aggcgacccc aagccctgtc tgaggaaacc attaagaaac
     2341 tggagacaac tctgagacat aagtatttgg ccttcctgtc aggcctgcag gccctttact
     2401 gcatggcccc aactaaagca acatccccaa ctgttgacca atctgtaatc acaactatgc
     2461 cctggtctgt caaaagccca cagaagcccc tatctcagaa gtctccactt gaagccctat
     2521 gcctgagtgg gcttgagccc tgtactcaag atgacaagga gacttctgca aacattgcag
     2581 aagagttcca gcatggagct caggggcatg gaaggacaga gaaggtgcct ccagagagac
     2641 agcctctcct gaatagaccc tactcattag acacagagat catggagaga gtgagtttct
     2701 acctgaaaag gaaggctctg gatataaagt tgggaatttc tctaaaagag agtgtgttcc
     2761 aagagccaac tgcaacagac ttggagagtg aatctgttca ggagcctctc gggagtccac
     2821 gggaaagcac actgctacag ggaccgccca ccttatgtca cgttcctgta gccccagatc
     2881 cagataaggt ctgccttaaa cagccagcta ctgcagtgca ggttgtgttt caggagcaaa
     2941 accaaccgag ttccagagca gtgccccata gatctgcccg gcagggctca caagtccaca
     3001 ggaatatgat ggaggcccaa gtgcactatg ttcagatggg gaccggtggg gaaatgctga
     3061 acctagggga accctttagc actgagtccc aaagcccagg caagagtaag tcaggctatg
     3121 tccctacagt ggcaggcaag agaaaaatcc cagggaaacc caaggtcgtg ggggaccttg
     3181 gagaagggga cgcaggtctt ggattttccc tggtcagtct aaagacacgc caggatggag
     3241 agcaggagaa gaggctcctg cacagacaac tccagggctc ctcactacag gcccaaacct
     3301 ttcatcttga gggtgcctgt ccacacagcc cccaggagtc ccctgagctc cagttcgcag
     3361 atccacctcc agaagtcttc atggagacag actctgagca ggacatggaa gacagtcaaa
     3421 gcaaggaatc cattgtccca gaacctgcga ggactgctaa agccccccag cctatgctct
     3481 cccgggcttc ccagggcctt cctttcccac gctcaccaac tcagagaaag ccttctcagg
     3541 gccaacctgg tccaggtcac gtcccaccag ggcatgcaac gccagcctct ccctacacga
     3601 gacccagccg ccttccagag gctggcttga aaaataaaat gaaattattt tttcattcaa
     3661 ttaaactcaa gatgaagagc aaagcacaca cggagccatc cacggtctct acacctggaa
     3721 aggtggccaa aaccagtaaa gaaaatattg ataggggtct gcctcaagcc aagagcccca
     3781 ccaagaaaac aaagccagag gacttcagag ggcccaaggc ccagttttca gtagttggcc
     3841 cctgtctaac tccttcctat attctagaca gtaagttctg gcctcgacct cgacgagttg
     3901 gctctgtctc agtactaggc cactcttacc attgccctcg gcactgtcct aggttggctt
     3961 atgccaatca acagagaaac ccaccctagg tcccagggtt cacatcagaa atgttgttct
     4021 gttaatggac cccctccttt gtatccttta aagagaacga ttattgttat tttctctaat
     4081 gaacaggtgg attaaggagc cacccataat atattctgta cctgtaaacc
//
