LOCUS       NM_001033438            3152 bp    mRNA    linear   ROD 04-OCT-2023
DEFINITION  Mus musculus spermatogenesis associated 31 subfamily E member 3
            (Spata31e3), mRNA.
ACCESSION   NM_001033438 XM_001004350
VERSION     NM_001033438.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3152)
  AUTHORS   Girard A, Sachidanandam R, Hannon GJ and Carmell MA.
  TITLE     A germline-specific class of small RNAs binds mammalian Piwi
            proteins
  JOURNAL   Nature 442 (7099), 199-202 (2006)
   PUBMED   16751776
COMMENT     PREDICTED REFSEQ: This record has not been reviewed and the
            function is unknown. The reference sequence was derived from
            AK133043.1.
            
            On Apr 5, 2007 this sequence version replaced NM_001033438.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK133043.1, BC147515.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384, SAMN00849385
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-3152              AK133043.1         2-3153
FEATURES             Location/Qualifiers
     source          1..3152
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="13"
                     /map="13 25.64 cM"
     gene            1..3152
                     /gene="Spata31e3"
                     /gene_synonym="Gm906"
                     /note="spermatogenesis associated 31 subfamily E member 3"
                     /db_xref="GeneID:380882"
                     /db_xref="MGI:MGI:2685752"
     exon            1..230
                     /gene="Spata31e3"
                     /gene_synonym="Gm906"
                     /inference="alignment:Splign:2.1.0"
     CDS             45..3098
                     /gene="Spata31e3"
                     /gene_synonym="Gm906"
                     /codon_start=1
                     /product="uncharacterized protein LOC380882"
                     /protein_id="NP_001028610.1"
                     /db_xref="CCDS:CCDS49262.1"
                     /db_xref="GeneID:380882"
                     /db_xref="MGI:MGI:2685752"
                     /translation="MENFLSLMNSIIDSWMSNSSMDIAMDMTIGFMCGVGLFFLLIPF
                     LKEYPVSPASENEWSKPQDVKRWQKKTSKKTATGKGCTDGGKNAEETKTPSQPMEIPN
                     KQRYKNLSRFFWGTYSINSESVVATVHELRSPSLGKCKSVRFSDDSGPDKAPSKAKGL
                     PQHSQHQPLPHHRVIPNLVDEKQVQEKKILTKSTRKQTPPCFKSRTYVVPHPTTERRK
                     QASLPAGSLPGKHGPYSKETKDYDERKHQKAISKPTDNLRWDTLHCKAISPVIIHPEH
                     CQRLQLHKEPENNEKTTRVKEQQGTPFRFLPYRKPTHVQEHFPANTVHYCKNRPQLSQ
                     PAQASIFNTKPYKCSKWKGSVPTGLPLKKDIAKSDMHNTIKKDLGVGAQKVPGTASSS
                     PGKEVRPKKPALRTEKVSSMKPAGHYSLPEAKTASNFTELPVKQRRPYLQMLVARDLT
                     PPGVPASNLPQVVYPSSPICNSKAARVLEKLHHQDPGGTRIKSASVARPERAEFIHSL
                     PEAQETHRAPPFAASHGATKSHLDPLPRYLSVQRPACYFQAANPQQIRTLWGTGKGSL
                     KPSTNLKMAKHAPQKNFQEVDSRHRPWCMTMEGPGQRVLPSGAKQTTVEVKEEPPHAW
                     RVSLGSSESHIGKHIDIRPRDFGSLWANRLPAHLQIPTSQHSQDSSESIFSSNHQPRA
                     WPVSHHPVGPSRVIPADVNLPSKDSLPSFQNTVQNTKPSQGLCDVLMRRHQRSDTQEN
                     RVLADKIKVCDHDGVHPHVESQSIKSRAIRLAERLEEIRPSILSSIKLKDTAKSRIAE
                     KGEATSNTSRKNTLLNNLLERNLSKKYSEQGDSLRIDQPTPAAEQTKVLTIKMVIYRM
                     IAALKSLVDVLFQILEDSEGDTSEVQGSEVESLTTQLTSHSSESLYDTNYSRPASRRS
                     CGHSTSEMHNYSLTYRRMGDKLQSGIKAQRACDPYMNQEMRGMCFDQLHMPKGKELPC
                     EYRRNGAKQEPGLVAQQASDSRYTLQNRLRSRWLRPSMPSHTRIF"
     exon            231..282
                     /gene="Spata31e3"
                     /gene_synonym="Gm906"
                     /inference="alignment:Splign:2.1.0"
     exon            283..343
                     /gene="Spata31e3"
                     /gene_synonym="Gm906"
                     /inference="alignment:Splign:2.1.0"
     exon            344..3152
                     /gene="Spata31e3"
                     /gene_synonym="Gm906"
                     /inference="alignment:Splign:2.1.0"
     regulatory      3132..3137
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Spata31e3"
                     /gene_synonym="Gm906"
                     /note="putative"
     polyA_site      3152
                     /gene="Spata31e3"
                     /gene_synonym="Gm906"
                     /note="putative"
ORIGIN      
        1 actcaaggac tcagtagcct gagagctgca ttgcgattca gaagatggag aattttctct
       61 ctctgatgaa tagcattatc gattcatgga tgagcaacag ctccatggac atagcaatgg
      121 acatgaccat tggctttatg tgtggagttg ggctcttttt cctacttatc cccttcctga
      181 aggagtaccc agtgtcacca gcatctgaga atgaatggag caaaccacag gatgtgaaga
      241 ggtggcagaa gaagaccagt aagaaaacag ctactggaaa aggttgtaca gatggaggaa
      301 aaaatgcaga agagaccaag acaccatcac aacctatgga aatccccaac aagcaacgtt
      361 acaaaaatct tagtcgattt ttctggggta catactctat taactctgaa tcagttgtgg
      421 ctactgtcca tgagctcaga agcccttcct tgggaaaatg taaatctgtg aggtttagtg
      481 atgacagtgg ccctgacaaa gctccatcca aggctaaagg acttccacag cattcccagc
      541 atcagccatt acctcaccac cgtgtgatac caaacttggt agatgagaaa caagtccaag
      601 aaaagaaaat cctcacaaaa tctacccgaa aacaaacacc accttgtttc aaaagtagga
      661 cctatgtggt gccacatccc accactgaga gaaggaaaca ggcatcccta ccagctggaa
      721 gcctgcctgg gaaacatgga ccatattcaa aagaaaccaa agattatgat gagcgaaaac
      781 atcaaaaagc tattagcaag cccactgaca acttgcgctg ggacaccctg cattgtaaag
      841 ctatcagtcc agtcatcatc catcctgagc attgccagag gctccagctc cataaggagc
      901 cagagaataa cgaaaagaca actagagtca aagaacaaca aggaacccca ttcagattcc
      961 tcccctacag gaaaccgacc catgtacagg aacatttccc agcaaacact gttcattatt
     1021 gcaagaacag gcctcaactc tcccagcctg cccaggcctc catcttcaac accaaaccct
     1081 acaaatgtag taaatggaag gggtctgtgc ctacagggct gcccttaaag aaggacatag
     1141 caaagtctga tatgcataac accatcaaga aggaccttgg tgtgggggca caaaaggtgc
     1201 ctggcactgc aagcagcagc cctgggaagg aggtgagacc caagaaacct gcactgagga
     1261 cagagaaggt gtcctccatg aaacctgctg ggcactattc cctgcctgag gcaaagacag
     1321 catcaaattt cacagagctt ccagtgaaac aaaggagacc atatctgcag atgcttgtgg
     1381 caagggatct gaccccacct ggagttccag cctcaaacct cccccaggtt gtgtatccct
     1441 cctcgcccat ctgcaattcc aaggctgcca gggtcctgga aaaattgcat caccaggatc
     1501 caggagggac aaggataaaa agtgcatcag ttgcgaggcc agagagagct gagtttatac
     1561 actcacttcc agaggctcag gagacccaca gagcccctcc atttgctgcc agccatgggg
     1621 ccacaaagtc tcatctagat ccattgccaa gatacctgag tgttcagaga cctgcttgct
     1681 acttccaggc agcaaatccc caacagatca ggactctctg gggcactgga aaaggcagtc
     1741 tgaagccaag taccaatctc aaaatggcca agcatgcacc acagaagaac tttcaggagg
     1801 tggactcacg acatcgccca tggtgtatga caatggaagg ccctggacaa agggtcctac
     1861 cttcaggagc caaacaaact acagtggagg tgaaagaaga gccacctcat gcatggagag
     1921 tgagtctggg atccagtgag agtcacattg gtaagcatat cgatatcaga cccagggact
     1981 ttgggtcatt atgggccaac agactcccag cccatctaca aatacctacc tcccaacact
     2041 cacaggactc aagtgagagt atttttagtt caaaccacca gccaagagcc tggcctgtga
     2101 gtcaccatcc agttggcccc agtagagtca tccctgctga tgtcaacttg ccttcaaagg
     2161 actctctgcc cagtttccag aatacagtcc aaaacaccaa gccttcccag ggcttatgcg
     2221 atgtcctcat gaggagacac cagaggagtg atactcaaga gaacagggtc ctagctgata
     2281 agatcaaagt ttgtgatcat gatggggtcc atccccatgt agagagccag agtataaaat
     2341 ctagggccat acgcctggca gaaaggcttg aagaaataag gccttcgatc ctgagctcca
     2401 taaagctcaa ggatacagcc aagtctagga tagcagaaaa aggagaggct acttctaata
     2461 cctctcggaa gaacacctta cttaataatt tactagaaag aaacctcagc aaaaaataca
     2521 gtgagcaagg ggattcttta aggattgatc aacccacacc agctgctgag cagacaaaag
     2581 tcttaaccat taaaatggtc atctacagaa tgatagctgc actgaaatcc cttgtggatg
     2641 ttctgttcca gatcttggag gacagtgaag gggacacatc agaggtacaa gggagtgaag
     2701 tggaatcact gacaacccag ctgacatccc actcttctga gagtctgtat gacacaaact
     2761 atagcagacc agcaagcagg cggagctgtg gccattccac ctctgagatg cataactatt
     2821 ctttgacata tagaagaatg ggagacaaat tgcagtcagg gattaaagcc caaagagcct
     2881 gtgacccata tatgaaccaa gagatgagag ggatgtgctt tgaccagctc cacatgccca
     2941 aggggaaaga acttccatgt gagtacagga gaaatggagc caagcaggag ccaggtcttg
     3001 ttgcccagca agcctctgac tctaggtata ccttgcagaa taggttaagg agcaggtggc
     3061 tcaggccatc catgccttcc cacaccagga tcttctagaa gatgtcccat cttgccagcc
     3121 attgtcctag taataaactt ggttttctcc ct
//
