LOCUS       NM_029299                711 bp    mRNA    linear   ROD 03-JUN-2024
DEFINITION  Mus musculus spermatogenesis associated 19 (Spata19), transcript
            variant 1, mRNA; nuclear genes for mitochondrial products.
ACCESSION   NM_029299
VERSION     NM_029299.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 711)
  AUTHORS   Mi,Y., Shi,Z. and Li,J.
  TITLE     Spata19 is critical for sperm mitochondrial function and male
            fertility
  JOURNAL   Mol Reprod Dev 82 (11), 907-913 (2015)
   PUBMED   26265198
  REMARK    GeneRIF: findings suggest that SPATA19 plays an important role in
            sperm motility by regulating the organization and function of the
            mitochondria.
REFERENCE   2  (bases 1 to 711)
  AUTHORS   Nourashrafeddin,S., Ebrahimzadeh-Vesal,R., Modarressi,M.H.,
            Zekri,A. and Nouri,M.
  TITLE     Identification of Spata-19 new variant with expression beyond
            meiotic phase of mouse testis development
  JOURNAL   Rep Biochem Mol Biol 2 (2), 89-93 (2014)
   PUBMED   26989727
REFERENCE   3  (bases 1 to 711)
  AUTHORS   Matsuoka,Y., Iguchi,N., Kitamura,K., Nishimura,H., Manabe,H.,
            Miyagawa,Y., Koga,M., Matsumiya,K., Okuyama,A., Tanaka,H. and
            Nishimune,Y.
  TITLE     Cloning and characterization of a mouse spergen-1 localized in
            sperm mitochondria
  JOURNAL   Int J Androl 27 (3), 152-160 (2004)
   PUBMED   15139970
REFERENCE   4  (bases 1 to 711)
  AUTHORS   Miyamoto,T., Sengoku,K., Hasuike,S., Takuma,N., Hayashi,H.,
            Yamashita,T. and Ishikawa,M.
  TITLE     Isolation and expression analysis of the human testis-specific
            gene, SPERGEN-1, a spermatogenic cell-specific gene-1
  JOURNAL   J Assist Reprod Genet 20 (2), 101-104 (2003)
   PUBMED   12688595
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC154374.1 and AK005610.1.
            
            On Feb 20, 2015 this sequence version replaced NM_029299.2.
            
            Transcript Variant: This variant (1) represents the longer
            transcript and encodes the longer isoform (1).
            
            ##Evidence-Data-START##
            Transcript exon combination :: AB120716.1, BU936390.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384, SAMN01164136
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-14                AC154374.1         107255-107268
            15-710              AK005610.1         2-697
            711-711             AC154374.1         112159-112159
FEATURES             Location/Qualifiers
     source          1..711
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="9"
                     /map="9 12.9 cM"
     gene            1..711
                     /gene="Spata19"
                     /gene_synonym="1700001L23Rik; spergen-1"
                     /note="spermatogenesis associated 19"
                     /db_xref="GeneID:75469"
                     /db_xref="MGI:MGI:1922719"
     exon            1..140
                     /gene="Spata19"
                     /gene_synonym="1700001L23Rik; spergen-1"
                     /inference="alignment:Splign:2.1.0"
     CDS             63..527
                     /gene="Spata19"
                     /gene_synonym="1700001L23Rik; spergen-1"
                     /note="isoform 1 precursor is encoded by transcript
                     variant 1; spermatogenesis-associated protein 19,
                     mitochondrial; spermatogenic cell-specific gene 1 protein"
                     /codon_start=1
                     /product="spermatogenesis-associated protein 19,
                     mitochondrial isoform 1 precursor"
                     /protein_id="NP_083575.1"
                     /db_xref="CCDS:CCDS22941.1"
                     /db_xref="GeneID:75469"
                     /db_xref="MGI:MGI:1922719"
                     /translation="MIITTWIMYIFARKTVGLPFPPRVNSDIEVEESEAVSVVQHWLN
                     KTEEEASRSIREKMSINDSPTHGHDIHVTRDLVKHHLSKSDMLTDPSQEVLEERTRIQ
                     FIRWSHTRIFQVPSEVMDDVMQERIDQVRRSVSHLMCDSYNDPSFRTSCSEC"
     exon            141..197
                     /gene="Spata19"
                     /gene_synonym="1700001L23Rik; spergen-1"
                     /inference="alignment:Splign:2.1.0"
     exon            198..290
                     /gene="Spata19"
                     /gene_synonym="1700001L23Rik; spergen-1"
                     /inference="alignment:Splign:2.1.0"
     exon            291..382
                     /gene="Spata19"
                     /gene_synonym="1700001L23Rik; spergen-1"
                     /inference="alignment:Splign:2.1.0"
     exon            383..460
                     /gene="Spata19"
                     /gene_synonym="1700001L23Rik; spergen-1"
                     /inference="alignment:Splign:2.1.0"
     exon            461..528
                     /gene="Spata19"
                     /gene_synonym="1700001L23Rik; spergen-1"
                     /inference="alignment:Splign:2.1.0"
     exon            529..711
                     /gene="Spata19"
                     /gene_synonym="1700001L23Rik; spergen-1"
                     /inference="alignment:Splign:2.1.0"
     regulatory      684..689
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Spata19"
                     /gene_synonym="1700001L23Rik; spergen-1"
                     /note="hexamer: AATAAA"
     polyA_site      711
                     /gene="Spata19"
                     /gene_synonym="1700001L23Rik; spergen-1"
                     /note="major polyA site"
ORIGIN      
        1 agaagttctc agacagcttc aatggaagga gggagccaag gagtccctct gtaagtctga
       61 agatgatcat tacaacatgg attatgtaca tctttgcccg gaaaaccgta gggctaccct
      121 tcccaccaag ggtgaactcg gacattgaag ttgaagaaag cgaagctgta tccgttgtgc
      181 agcactggtt gaacaaaacg gaagaggagg cttctcggag cataagggag aagatgtcca
      241 tcaacgactc tcccacccat ggacatgaca tacatgtgac cagagatttg gtgaaacacc
      301 atctctcaaa gtctgatatg ttaacagacc cgagtcaaga agtcctggag gaaagaacaa
      361 ggatccagtt tataagatgg agccacaccc gtatcttcca agtgccaagt gaagtgatgg
      421 atgacgtcat gcaggaacga atagatcaag tgagacgaag cgtatctcat ctcatgtgtg
      481 actcgtacaa tgatccaagc ttcaggactt cttgctcaga atgctaaggt tgaaggactc
      541 cagggtcgat gaacagcctg tgtccaaaga gtgtccacct catgttttga cctgaagggt
      601 gaccagactt gagaagagag actctaaacg ctgagccctt ggttaccacc atgacaatgc
      661 tggaaacttc ttactgaagt gctaataaag agacatctta tttaccaacc a
//
