LOCUS       NM_028848               1303 bp    mRNA    linear   ROD 06-FEB-2024
DEFINITION  Mus musculus spermatogenesis associated 17 (Spata17), transcript
            variant 1, mRNA.
ACCESSION   NM_028848
VERSION     NM_028848.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1303)
  AUTHORS   Deng,Y., Hu,L.S. and Lu,G.X.
  TITLE     Expression and identification of a novel apoptosis gene Spata17
            (MSRG-11) in mouse spermatogenic cells
  JOURNAL   Acta Biochim Biophys Sin (Shanghai) 38 (1), 37-45 (2006)
   PUBMED   16395525
  REMARK    GeneRIF: Flow cytometry analysis showed that the expression of
            Spata17 protein in the GC-1 cell line could accelerate GC-1 cell
            apoptosis [Spata17]
REFERENCE   2  (bases 1 to 1303)
  AUTHORS   Deng,Y., Nie,D.S., Wang,J., Tan,X.J., Nie,Z.Y., Yang,H.M., Hu,L.S.
            and Lu,G.X.
  TITLE     Molecular cloning of MSRG-11 gene related to apoptosis of mouse
            spermatogenic cells
  JOURNAL   Acta Biochim Biophys Sin (Shanghai) 37 (3), 159-166 (2005)
   PUBMED   15756417
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK015780.1.
            
            On Jun 18, 2008 this sequence version replaced NM_028848.2.
            
            Transcript Variant: This variant (1) represents the longer
            transcript and encodes the longer isoform (1).
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMN00849384
                              [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1303              AK015780.1         21-1323
FEATURES             Location/Qualifiers
     source          1..1303
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="1"
                     /map="1 90.23 cM"
     gene            1..1303
                     /gene="Spata17"
                     /gene_synonym="1700065F16Rik; 4930504I07Rik;
                     4930513F16Rik; MSRG-11"
                     /note="spermatogenesis associated 17"
                     /db_xref="GeneID:74717"
                     /db_xref="MGI:MGI:1921967"
     exon            1..277
                     /gene="Spata17"
                     /gene_synonym="1700065F16Rik; 4930504I07Rik;
                     4930513F16Rik; MSRG-11"
                     /inference="alignment:Splign:2.1.0"
     CDS             162..1301
                     /gene="Spata17"
                     /gene_synonym="1700065F16Rik; 4930504I07Rik;
                     4930513F16Rik; MSRG-11"
                     /note="isoform 1 is encoded by transcript variant 1;
                     spermatogenesis-associated protein 17;
                     spermatogenesis-related protein 11"
                     /codon_start=1
                     /product="spermatogenesis-associated protein 17 isoform 1"
                     /protein_id="NP_083124.1"
                     /db_xref="CCDS:CCDS15604.1"
                     /db_xref="GeneID:74717"
                     /db_xref="MGI:MGI:1921967"
                     /translation="METNSNNFGELQELKDMATLAKLLARAPFLESQYYFRNRAVDSF
                     RKFENDAAVMIQSWFRGCQVRAYMRHLNRVVTIIQKWWRSYLGRKFYQLVVEAAYYTM
                     KMNLYNEMAVRIQRRWRGFRIRKYCFNYYYLKEYLRAVSETNDAIREALEEFAEMKER
                     EERKVLLEREEKQKDYQARKMHYLLSTKQISGIYNSPFREHPDPWELRLQKAKPLGHQ
                     KYTAEKGKTSQSPSNWLACTSVHSFPQSESLPPISRKRCQGPFRDINEVLEQRYKPLE
                     PTLRVAEPINHLRLAREAFKQEERMRNVQDKMFLPFSSYHKKEKYIPMIHSSSAYNSD
                     SYGQKHFRSQDSKKWISDKDFQTVLPSFQLFSKYGKLYSKAGEIV"
     exon            278..367
                     /gene="Spata17"
                     /gene_synonym="1700065F16Rik; 4930504I07Rik;
                     4930513F16Rik; MSRG-11"
                     /inference="alignment:Splign:2.1.0"
     exon            368..449
                     /gene="Spata17"
                     /gene_synonym="1700065F16Rik; 4930504I07Rik;
                     4930513F16Rik; MSRG-11"
                     /inference="alignment:Splign:2.1.0"
     exon            450..500
                     /gene="Spata17"
                     /gene_synonym="1700065F16Rik; 4930504I07Rik;
                     4930513F16Rik; MSRG-11"
                     /inference="alignment:Splign:2.1.0"
     exon            501..604
                     /gene="Spata17"
                     /gene_synonym="1700065F16Rik; 4930504I07Rik;
                     4930513F16Rik; MSRG-11"
                     /inference="alignment:Splign:2.1.0"
     exon            605..728
                     /gene="Spata17"
                     /gene_synonym="1700065F16Rik; 4930504I07Rik;
                     4930513F16Rik; MSRG-11"
                     /inference="alignment:Splign:2.1.0"
     exon            729..935
                     /gene="Spata17"
                     /gene_synonym="1700065F16Rik; 4930504I07Rik;
                     4930513F16Rik; MSRG-11"
                     /inference="alignment:Splign:2.1.0"
     exon            936..1084
                     /gene="Spata17"
                     /gene_synonym="1700065F16Rik; 4930504I07Rik;
                     4930513F16Rik; MSRG-11"
                     /inference="alignment:Splign:2.1.0"
     exon            1085..1220
                     /gene="Spata17"
                     /gene_synonym="1700065F16Rik; 4930504I07Rik;
                     4930513F16Rik; MSRG-11"
                     /inference="alignment:Splign:2.1.0"
     exon            1221..1303
                     /gene="Spata17"
                     /gene_synonym="1700065F16Rik; 4930504I07Rik;
                     4930513F16Rik; MSRG-11"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cttcccatca gcagctcgaa attccaggag aaaggggcga gtcgactcaa gtctggtctc
       61 acgtgtacaa atccgatttc tctgtccagt tgcttgaaac tgaaacagag tgaaaggaaa
      121 ggccgataag tcggaagtga ccttggttca gcccagttgc catggagact aatagtaaca
      181 attttggtga actccaggag ttgaaggaca tggctacttt agccaagctg ctggcgcggg
      241 caccctttct agaaagtcag tactacttta ggaaccgcgc cgttgattca tttaggaaat
      301 tcgagaatga tgcagctgtg atgatccaga gctggttccg agggtgccaa gtccgggcct
      361 atatgaggca cttgaacaga gtagtgacaa ttattcaaaa gtggtggaga agctacttag
      421 gcagaaaatt ttaccaactt gttgttgagg cagcatatta tactatgaag atgaatctct
      481 acaatgaaat ggctgtcagg attcagagac gatggcgtgg ctttaggatc cggaaatatt
      541 gctttaatta ttattatttg aaggaatatt taagagctgt ttcagaaacc aatgatgcaa
      601 ttcgggaggc tttggaggag ttcgcagaaa tgaaagagag agaagagaga aaggttctcc
      661 tggaacgaga ggagaagcaa aaagattacc aagcccgcaa gatgcattac ctgctcagca
      721 caaagcagat ttcaggtata tacaattcac ctttccgaga acatcctgac ccatgggaac
      781 tgcggttgca gaaggcaaag cctttgggtc accagaagta cactgcagaa aagggcaaga
      841 cctcccaaag ccctagtaac tggctggcat gcaccagtgt ccactccttc ccgcagtcgg
      901 agagtctgcc acctatcagc aggaagcggt gccagggacc cttccgagac atcaatgaag
      961 tcttggaaca gcgttataag cctttggagc ctaccctgag ggtggcagaa cccatcaacc
     1021 accttcgtct ggccagagag gcattcaagc aagaggaacg catgcgcaac gtgcaagaca
     1081 agatgttttt gccattttct tcctaccata aaaaggagaa gtacatccca atgatacact
     1141 cgtcaagtgc gtataattct gactcttatg gacagaagca ctttcgcagt caagactcta
     1201 agaagtggat ctctgacaag gatttccaga ctgttctgcc ttcatttcaa ctcttctcga
     1261 agtatggaaa gttatattcg aaagctggag aaattgtata aag
//
