LOCUS       NM_172561               1161 bp    mRNA    linear   ROD 19-NOV-2024
DEFINITION  Mus musculus sperm associated antigen 7 (Spag7), transcript variant
            1, mRNA.
ACCESSION   NM_172561
VERSION     NM_172561.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1161)
  AUTHORS   Flaherty,S.E. 3rd, Bezy,O., Paulhus,B.L., Song,L., Piper,M.,
            Pang,J., Park,Y., Asano,S., Lien,Y.C., Griffin,J.D., Robertson,A.,
            Opsahl,A., Shanthappa,D.H., Ahn,Y., Pashos,E., Simmons,R.A.,
            Birnbaum,M.J. and Wu,Z.
  TITLE     SPAG7 deletion causes intrauterine growth restriction, resulting in
            adulthood obesity and metabolic dysfunction
  JOURNAL   Elife 12, 91114 (2024)
   PUBMED   39056292
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1161)
  AUTHORS   Cai,J., Ash,D., Kotch,L.E., Jabs,E.W., Attie-Bitach,T., Auge,J.,
            Mattei,G., Etchevers,H., Vekemans,M., Korshunova,Y., Tidwell,R.,
            Messina,D.N., Winston,J.B. and Lovett,M.
  TITLE     Gene expression in pharyngeal arch 1 during human embryonic
            development
  JOURNAL   Hum Mol Genet 14 (7), 903-912 (2005)
   PUBMED   15703188
REFERENCE   3  (bases 1 to 1161)
  AUTHORS   Kaput,J., Klein,K.G., Reyes,E.J., Kibbe,W.A., Cooney,C.A.,
            Jovanovic,B., Visek,W.J. and Wolff,G.L.
  TITLE     Identification of genes contributing to the obese yellow Avy
            phenotype: caloric restriction, genotype, diet x genotype
            interactions
  JOURNAL   Physiol Genomics 18 (3), 316-324 (2004)
   PUBMED   15306695
  REMARK    Publication Status: Online-Only
REFERENCE   4  (bases 1 to 1161)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
REFERENCE   5  (bases 1 to 1161)
  AUTHORS   Watters,J.W. and Dietrich,W.F.
  TITLE     Genetic, physical, and transcript map of the Ltxs1 region of mouse
            chromosome 11
  JOURNAL   Genomics 73 (2), 223-231 (2001)
   PUBMED   11318612
  REMARK    Erratum:[Genomics 2002 Mar;79(3):462]
REFERENCE   6  (bases 1 to 1161)
  AUTHORS   Beaton,S., Cleary,A., ten Have,J. and Bradley,M.P.
  TITLE     Cloning and characterization of a fox sperm protein FSA-1
  JOURNAL   Reprod Fertil Dev 6 (6), 761-770 (1994)
   PUBMED   7624517
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL596117.19, AK042294.1 and AV122139.1.
            
            On Nov 10, 2009 this sequence version replaced NM_172561.2.
            
            Transcript Variant: This variant (1) encodes the longer isoform
            (1).
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC055821.1, AK042294.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164131, SAMN01164134
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-122               AL596117.19        36659-36780         c
            123-1155            AK042294.1         2-1034
            1156-1161           AV122139.1         156-161
FEATURES             Location/Qualifiers
     source          1..1161
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="11"
                     /map="11 43.21 cM"
     gene            1..1161
                     /gene="Spag7"
                     /gene_synonym="5730443G10; ACRP; FSA-1; Fsa1l"
                     /note="sperm associated antigen 7"
                     /db_xref="GeneID:216873"
                     /db_xref="MGI:MGI:107380"
     exon            1..220
                     /gene="Spag7"
                     /gene_synonym="5730443G10; ACRP; FSA-1; Fsa1l"
                     /inference="alignment:Splign:2.1.0"
     exon            221..288
                     /gene="Spag7"
                     /gene_synonym="5730443G10; ACRP; FSA-1; Fsa1l"
                     /inference="alignment:Splign:2.1.0"
     exon            289..377
                     /gene="Spag7"
                     /gene_synonym="5730443G10; ACRP; FSA-1; Fsa1l"
                     /inference="alignment:Splign:2.1.0"
     exon            378..462
                     /gene="Spag7"
                     /gene_synonym="5730443G10; ACRP; FSA-1; Fsa1l"
                     /inference="alignment:Splign:2.1.0"
     exon            463..552
                     /gene="Spag7"
                     /gene_synonym="5730443G10; ACRP; FSA-1; Fsa1l"
                     /inference="alignment:Splign:2.1.0"
     exon            553..709
                     /gene="Spag7"
                     /gene_synonym="5730443G10; ACRP; FSA-1; Fsa1l"
                     /inference="alignment:Splign:2.1.0"
     exon            710..1161
                     /gene="Spag7"
                     /gene_synonym="5730443G10; ACRP; FSA-1; Fsa1l"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1122..1127
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Spag7"
                     /gene_synonym="5730443G10; ACRP; FSA-1; Fsa1l"
                     /note="hexamer: AATAAA"
     polyA_site      1142
                     /gene="Spag7"
                     /gene_synonym="5730443G10; ACRP; FSA-1; Fsa1l"
                     /note="major polyA site"
ORIGIN      
        1 gcaagtcgcc ggcctcatct cgctgcctta agcggggcgg agcagcgcgg tttttcgctt
       61 ccgacgtgtt tccggcctta aaggcatttc gtccttccct ttaagacgca ccgccccctc
      121 tcactcattc ccaagatggc ggacctactg ggctccatcc tgagctccat ggagaaacca
      181 cccagcctcg gtgaccagga gagtcggcgc aaggcccgag agcaggctgc ccgtctgaag
      241 aaactacaag agcaagacaa acagcagaaa gtggagtttc ggaaaaggat ggagaaagag
      301 gtgtctgatt tcatccagga cagtggacag gtcaagaaaa agtttcagcc tatgaacaag
      361 atagagcgga gcatactaca tgatgtggta gaggtggctg gcctcacatc cttctccttt
      421 ggagaagatg atgactgtcg ctatgtcatg atcttcaaaa aggagtttgc accctcagat
      481 gaagagctag actcctaccg tcatggagag gagtgggacc cccagaaggc tgaggagaag
      541 cggaagctaa aggagctggc tcagaagcag gaggaagagg cagcgcagca gggacctgcg
      601 gttgtgagtc ctgccagcga ctacaaggac aagtatagcc atcttattgg caaaggagca
      661 gccaaagatg cagcccacat gctacaggcc aacaagacct atggctgtgt tcctgtggcc
      721 aacaagcggg acacacggtc catagaggag gccatgaatg agatcagagc caagaaacgc
      781 ctgcggcaga gtggtgaaga gttgccaact acctcctagg catcccgccc accttgcttt
      841 gacctccagc aaggcagggg catggaggga caaggctgct gctatcagga cccattctgg
      901 agccccattt ctaacctatg aggccctgcc agctgtcact caggctggag gagaagcaag
      961 tgtttatcac tgctggaatt tggatgtatg gggtgtgtgt gtgtgtgtgt gtgtgtgtgt
     1021 gtgtgtgtgt gtgtgtgtgt gtaaaaatgt gtatttaatc tgtattattc tctattaccc
     1081 ttggaacttt cttccccgtg ggcctgggtt actttacatt gaataaacac tgtttgaccc
     1141 agtgttctga cttgtacctg g
//
