LOCUS       NM_001085393             611 bp    mRNA    linear   ROD 04-AUG-2024
DEFINITION  Mus musculus sperm acrosome associated 5 (Spaca5), mRNA.
ACCESSION   NM_001085393 XM_001006691 XM_001476044
VERSION     NM_001085393.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 611)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL671853.7.
            
            On Dec 5, 2019 this sequence version replaced NM_001085393.2.
            
            Sequence Note: This RefSeq record was created from genomic sequence
            data to make the sequence consistent with the reference genome
            assembly. There is no transcript evidence for this gene in mouse;
            this RefSeq is predicted from alignments of homologous transcripts,
            including human AY358844.1 and AF217622.1, pig GU474993.1, cow
            BC108157.1, and rat BF386035.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR5189685.307485.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-203               AL671853.7         157215-157417
            204-362             AL671853.7         165310-165468
            363-441             AL671853.7         166392-166470
            442-611             AL671853.7         166574-166743
FEATURES             Location/Qualifiers
     source          1..611
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 16.59 cM"
     gene            1..611
                     /gene="Spaca5"
                     /gene_synonym="Gm718; Lyze"
                     /note="sperm acrosome associated 5"
                     /db_xref="GeneID:278203"
                     /db_xref="MGI:MGI:2685564"
     exon            1..203
                     /gene="Spaca5"
                     /gene_synonym="Gm718; Lyze"
                     /inference="alignment:Splign:2.1.0"
     CDS             59..541
                     /gene="Spaca5"
                     /gene_synonym="Gm718; Lyze"
                     /EC_number="3.2.1.17"
                     /note="sperm acrosome-associated protein 5; novel C-type
                     lysozyme/alpha-lactalbumin family domain containing
                     protein; lysozyme-like protein 5; lysozyme e"
                     /codon_start=1
                     /product="sperm acrosome-associated protein 5 precursor"
                     /protein_id="NP_001078862.1"
                     /db_xref="CCDS:CCDS40888.1"
                     /db_xref="GeneID:278203"
                     /db_xref="MGI:MGI:2685564"
                     /translation="MKVCSIVVVILAVLLIAKLDAKIYERCELAKKLEEAGLDGFKGY
                     TVGDWLCVAHYESGFDTSFVDHNPDGSSEYGIFQLNSAWWCNNGITPTQNLCNIDCND
                     LLNRHILDDIICAKRVASSHKSMKAWDSWTQHCAGHDLSEWLKGCSVRLKTDSSYNNW
                     "
     exon            204..362
                     /gene="Spaca5"
                     /gene_synonym="Gm718; Lyze"
                     /inference="alignment:Splign:2.1.0"
     exon            363..441
                     /gene="Spaca5"
                     /gene_synonym="Gm718; Lyze"
                     /inference="alignment:Splign:2.1.0"
     exon            442..611
                     /gene="Spaca5"
                     /gene_synonym="Gm718; Lyze"
                     /inference="alignment:Splign:2.1.0"
     regulatory      590..595
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Spaca5"
                     /gene_synonym="Gm718; Lyze"
                     /note="hexamer: AATAAA"
     polyA_site      611
                     /gene="Spaca5"
                     /gene_synonym="Gm718; Lyze"
                     /note="major polyA site"
ORIGIN      
        1 attcctgatc atcagtggat ctgaggcaag ggaccatata gaagggcttt tggctgtcat
       61 gaaggtctgc agcattgtgg tagtgatctt ggccgtattg ttgattgcca aattggatgc
      121 caagatttat gaacgctgtg agctggcaaa gaagctggag gaggctggcc tcgatggctt
      181 caaaggctat actgttggag actggctgtg tgtggcacac tatgagagtg gctttgacac
      241 ctcttttgtg gaccacaatc cagatggcag cagtgaatat ggcattttcc agctgaactc
      301 tgcctggtgg tgtaacaatg gcatcacacc cactcagaac ctctgcaaca tcgattgtaa
      361 tgacctgctc aaccgccata ttctggatga tatcatatgt gccaagaggg ttgcatcctc
      421 acataagagt atgaaggcct gggattcctg gacccagcac tgtgccggtc atgatttatc
      481 agaatggcta aaggggtgtt ctgtgcgtct gaaaactgac tcaagctata ataactggtg
      541 acaaagattt tataagaata gagattccat ttttttcttt tgtgggctta ataaaaggtg
      601 gcatacataa a
//
