LOCUS       NM_011440               2075 bp    mRNA    linear   ROD 31-DEC-2024
DEFINITION  Mus musculus SRY (sex determining region Y)-box 14 (Sox14), mRNA.
ACCESSION   NM_011440 XM_284529 XM_907434
VERSION     NM_011440.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2075)
  AUTHORS   Dudukcu,O., Raj,D.D.A., van de Haar,L.L., Grossouw,L.M.,
            Linders,L.E., Garritsen,O., Adolfs,Y., van Kronenburg,N.C.H.,
            Broekhoven,M.H., Kapteijns,T.H.W., Meye,F.J. and Pasterkamp,R.J.
  TITLE     Molecular diversity and migration of GABAergic neurons in the
            developing ventral midbrain
  JOURNAL   iScience 27 (11), 111239 (2024)
   PUBMED   39569362
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2075)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   3  (bases 1 to 2075)
  AUTHORS   Puelles,L. and Hidalgo-Sanchez,M.
  TITLE     The Midbrain Preisthmus: A Poorly Known Effect of the Isthmic
            Organizer
  JOURNAL   Int J Mol Sci 24 (11), 9769 (2023)
   PUBMED   37298722
  REMARK    Publication Status: Online-Only
REFERENCE   4  (bases 1 to 2075)
  AUTHORS   Brock,O., Gelegen,C., Sully,P., Salgarella,I., Jager,P., Menage,L.,
            Mehta,I., Jeczmien-Lazur,J., Djama,D., Strother,L., Coculla,A.,
            Vernon,A.C., Brickley,S., Holland,P., Cooke,S.F. and Delogu,A.
  TITLE     A Role for Thalamic Projection GABAergic Neurons in Circadian
            Responses to Light
  JOURNAL   J Neurosci 42 (49), 9158-9179 (2022)
   PUBMED   36280260
REFERENCE   5  (bases 1 to 2075)
  AUTHORS   Kirjavainen,A., Singh,P., Lahti,L., Seja,P., Lelkes,Z.,
            Makkonen,A., Kilpinen,S., Ono,Y., Salminen,M., Aitta-Aho,T.,
            Stenberg,T., Molchanova,S., Achim,K. and Partanen,J.
  TITLE     Gata2, Nkx2-2 and Skor2 form a transcription factor network
            regulating development of a midbrain GABAergic neuron subtype with
            characteristics of REM-sleep regulatory neurons
  JOURNAL   Development 149 (14) (2022)
   PUBMED   35815619
REFERENCE   6  (bases 1 to 2075)
  AUTHORS   Hargrave,M., James,K., Nield,K., Toomes,C., Georgas,K.,
            Sullivan,T., Verzijl,H.T., Oley,C.A., Little,M., De Jonghe,P.,
            Kwon,J.M., Kremer,H., Dixon,M.J., Timmerman,V., Yamada,T. and
            Koopman,P.
  TITLE     Fine mapping of the neurally expressed gene SOX14 to human 3q23,
            relative to three congenital diseases
  JOURNAL   Hum Genet 106 (4), 432-439 (2000)
   PUBMED   10830911
REFERENCE   7  (bases 1 to 2075)
  AUTHORS   Hargrave,M., Karunaratne,A., Cox,L., Wood,S., Koopman,P. and
            Yamada,T.
  TITLE     The HMG box transcription factor gene Sox14 marks a novel subset of
            ventral interneurons and is regulated by sonic hedgehog
  JOURNAL   Dev Biol 219 (1), 142-153 (2000)
   PUBMED   10677261
REFERENCE   8  (bases 1 to 2075)
  AUTHORS   Wilmore,H.P., Smith,M.J., Wilcox,S.A., Bell,K.M. and Sinclair,A.H.
  TITLE     SOX14 is a candidate gene for limb defects associated with BPES and
            Mobius syndrome
  JOURNAL   Hum Genet 106 (3), 269-276 (2000)
   PUBMED   10798354
REFERENCE   9  (bases 1 to 2075)
  AUTHORS   Hargrave,M., James,K., Yamada,T. and Koopman,P.
  TITLE     Sox14 maps to mouse chromosome 9 and shows no mutations in the
            neurological mouse mutants ducky and tippy
  JOURNAL   Mamm Genome 11 (3), 231-233 (2000)
   PUBMED   10723729
REFERENCE   10 (bases 1 to 2075)
  AUTHORS   Wright,E.M., Snopek,B. and Koopman,P.
  TITLE     Seven new members of the Sox gene family expressed during mouse
            development
  JOURNAL   Nucleic Acids Res 21 (3), 744 (1993)
   PUBMED   8441686
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC100555.1 and BC055767.1.
            
            On or before Apr 9, 2009 this sequence version replaced
            XM_907434.2, XM_284529.7.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript is intronless :: BC100555.1, BC083360.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-10                BC100555.1         1-10
            11-2075             BC055767.1         1-2065
FEATURES             Location/Qualifiers
     source          1..2075
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="9"
                     /map="9 52.11 cM"
     gene            1..2075
                     /gene="Sox14"
                     /note="SRY (sex determining region Y)-box 14"
                     /db_xref="GeneID:20669"
                     /db_xref="MGI:MGI:98362"
     exon            1..2065
                     /gene="Sox14"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1927..1932
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Sox14"
                     /note="hexamer: AATAAA"
     polyA_site      1947
                     /gene="Sox14"
     regulatory      2034..2039
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Sox14"
                     /note="hexamer: AATAAA"
     polyA_site      2065
                     /gene="Sox14"
                     /note="major polyA site"
ORIGIN      
        1 ccagcctccc cgcattctcg gccaggtgca gtgctaggca aagcagcgcc cggaaaccac
       61 gggagggggg gagccacggc cagagaagcc aggggagaga cgggaaggag agaaggcgaa
      121 ggtgaagagg gagcgaagga ggaatctcct gcccttgcca gaaaattacc tagccactta
      181 atcccaagac tctggtactt gggccccaat ctctggtgcc cacagactcc aggccgagcg
      241 ccctctcatc cccgctgccc ttcctaccct tcggccccct gggggctgcc tgggggctgg
      301 gactggcatg atcagttgaa aactttgcag ggtcagctct tctctctgat ttcccctctg
      361 cggctccgag acgaggggag ttcagagtcc cgggctcagg acggacagaa agacagacgg
      421 ccaaccgcgc ccaggctcgc ccgcagagcc cctgcattcc ccgcccccgc ccgcctcgcc
      481 gggaccatgt ccaaaccttc agaccacatc aagcggccca tgaatgcctt catggtatgg
      541 tcccggggcc agcggcgcaa gatggcccag gaaaatccca agatgcacaa ctcggagatc
      601 agcaaacgcc tgggcgccga atggaagctc ctgtccgagg cagagaagcg gccttacatc
      661 gatgaagcca aaaggctgcg cgcccaacac atgaaggagc accctgacta caagtaccgg
      721 ccgcggcgca agccgaagaa cctgctcaag aaggacaggt atgtcttccc cctgccctac
      781 ctgggcgaca cggacccgct caaggcggcc ggcctgcccg tgggggcttc cgacggcctc
      841 ctgagcgcgc ccgagaaagc ccgggccttc ttgccgcctg cctcggcacc ttactccctg
      901 ctggaccctg cgcaatttag ttccagtgcc atccagaaga tgggtgaagt gccccacacg
      961 ttggccacca gcgcgctgcc ctacgcgtcc accctgggct atcagaacgg cgccttcggc
     1021 agtctcagct gccccagcca gcacacgcac acgcacccgt cccccaccaa cccgggctac
     1081 gtggtgccct gtaactgtac cgcctggtct gcctccaccc tgcagccccc tgtcgcctac
     1141 atcctcttcc caggcatgac caagactggc atagaccctt attcgtcagc ccacgctacg
     1201 gccatgtaac cccaagcttg gcccggacct gatgggtagc gtggaagcag agatctgaat
     1261 cctttccttt gcacctagtc tggcccgcag atgcctctgg gtcaggcctg ccgctgcccc
     1321 ttgcccaccc cagactctgc ctctctcttc caggggggaa gggaagggcc atcatcctgg
     1381 acccaaggca cagactggtg ccagaaattt gcaaacattt agaaagctac acatcttctt
     1441 cccctctccc gactctccca aagcaagtct cgactgtacc ccctttggac aaaaaaaaaa
     1501 gtaggcagtt ttgctttatt tacgtccccc tcactgtccg cggataggct ttggactcgg
     1561 aactcccaga tcctggtatt atatctagaa tatgcgtata tatatatttt ttcctttccc
     1621 actgaagaaa aagagctgag tcttggtgct gtgccgtcag acacagctag gcaccatttg
     1681 ctcttcctgt gtgtggggag gtgaaaggct taaaagttta aaacttcagg aagggaaacc
     1741 tttctgttta aaaccatact atggtcgtgt ttgcttcgat aaaaagaaaa caaaaaggaa
     1801 ccacgtggct tttcgctttg tgtacccgca gtactcctag acacctaagt ttacttttag
     1861 acagaatgtc aggtaatgaa gtcaggaagt agaaagtgga caaaacctta aaataataat
     1921 aataataata aacatcctac atggtcataa atgtttggac aatgtcttgg aaatgtacct
     1981 agaaggattt tttccctcat tcctctgttc atttgttgaa caaagacgtt ttgaataaag
     2041 acaatctgtc attgcaaaaa agtaaaaaaa aaaaa
//
