LOCUS       NM_172939               4513 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Mus musculus sosondowah ankyrin repeat domain family member C
            (Sowahc), mRNA.
ACCESSION   NM_172939 XM_884335 XM_904314
VERSION     NM_172939.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 4513)
  AUTHORS   Yokoyama,S., Ito,Y., Ueno-Kudoh,H., Shimizu,H., Uchibe,K.,
            Albini,S., Mitsuoka,K., Miyaki,S., Kiso,M., Nagai,A., Hikata,T.,
            Osada,T., Fukuda,N., Yamashita,S., Harada,D., Mezzano,V., Kasai,M.,
            Puri,P.L., Hayashizaki,Y., Okado,H., Hashimoto,M. and Asahara,H.
  TITLE     A systems approach reveals that the myogenesis genome network is
            regulated by the transcriptional repressor RP58
  JOURNAL   Dev Cell 17 (6), 836-848 (2009)
   PUBMED   20059953
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK030944.1, AK050497.1 and BE686181.1.
            
            On or before May 2, 2008 this sequence version replaced
            XM_904314.3, XM_884335.3, NM_172939.2.
            
            ##Evidence-Data-START##
            Transcript is intronless :: AK050497.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-31                AK030944.1         2-32
            32-95               AK050497.1         2-65
            96-622              AK030944.1         97-623
            623-4510            AK050497.1         594-4481
            4511-4513           BE686181.1         352-354
FEATURES             Location/Qualifiers
     source          1..4513
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="10"
                     /map="10 29.5 cM"
     gene            1..4513
                     /gene="Sowahc"
                     /gene_synonym="4921515A04Rik; 9430099J10Rik; Ankrd57;
                     C820004L04Rik"
                     /note="sosondowah ankyrin repeat domain family member C"
                     /db_xref="GeneID:268301"
                     /db_xref="MGI:MGI:3606051"
     exon            1..4513
                     /gene="Sowahc"
                     /gene_synonym="4921515A04Rik; 9430099J10Rik; Ankrd57;
                     C820004L04Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             123..1661
                     /gene="Sowahc"
                     /gene_synonym="4921515A04Rik; 9430099J10Rik; Ankrd57;
                     C820004L04Rik"
                     /note="ankyrin repeat domain-containing protein 57;
                     ankyrin repeat domain 57; protein sosondowah homolog C"
                     /codon_start=1
                     /product="ankyrin repeat domain-containing protein SOWAHC"
                     /protein_id="NP_766527.3"
                     /db_xref="CCDS:CCDS59544.1"
                     /db_xref="GeneID:268301"
                     /db_xref="MGI:MGI:3606051"
                     /translation="MEGSLELSSEAILRFLAERGGRAGHSELVQHFRDVLGGQREQRT
                     RARERFKELVNAVATVRTDPADGTKYVHLKKRFCTGDSPPLEAKLPREPPRIEVTEEP
                     QVPDLAAEPCEGSQLQEANPQLSLGLGGEVSDQEPPAPAQGGAQGKDSPPQEVEAVSW
                     ASGPGSSENLKLPPQGEAEGGSSPSGPNTPRSARQNFRDLVLGSSPQLKRSVGPGDGN
                     AGGRSRGGGDSDTASLASSSAEEESSVGASVTLDPLDHAWMLSASEGKWDSLEGLLTC
                     EPGLLSKRDFITGFTCLHWAAKHGRQELLAMLVNFATKHQLPVNINAKSSGGYTALHL
                     AAMHGHVEVVKLLVGAYDADVDIRDYSGRKASQYLSESIAEEIKNLVGALDEDDGDSP
                     AARGGGRWRLSKVLPSHITHKLSPVVEDGAELHHHVPEGWTGGSKAKDSGRKASGSSS
                     GRMKPRLNKIRFRTQIIHTTPSFRDAKPTLEEGEEEEEEEEERSLRGYSSSFKLRPKS
                     NVFG"
     regulatory      4487..4492
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Sowahc"
                     /gene_synonym="4921515A04Rik; 9430099J10Rik; Ankrd57;
                     C820004L04Rik"
                     /note="hexamer: AATAAA"
     polyA_site      4513
                     /gene="Sowahc"
                     /gene_synonym="4921515A04Rik; 9430099J10Rik; Ankrd57;
                     C820004L04Rik"
                     /note="major polyA site"
ORIGIN      
        1 tcaaagctgg gatcgcgcgt gctgccagcc actgagaccc aagccgctct ccgggtcctc
       61 caggcgtccg gccatggtgt ctggctgagc gctcctgggg ctgagaagct gagccgcggt
      121 gaatggaggg gtcactggag ctgagctcgg aggcgatcct gcgcttcctc gccgagcgtg
      181 ggggccgggc gggacactcg gaattggtgc aacacttcag ggacgtcctg ggtggccagc
      241 gcgaacagcg cacccgcgcc cgcgagcgct tcaaggaact ggtcaatgcc gtggccaccg
      301 tgcgcaccga tcccgcggat ggtaccaagt atgtgcatct caagaaaagg ttctgtacgg
      361 gggattcccc cccgcttgag gccaagctcc cccgagagcc cccgcgtatc gaggtgactg
      421 aggagcctca agtcccggac cttgcagcgg agccttgcga gggcagccag ctccaggagg
      481 caaatccaca gttgtctctc ggactgggtg gcgaagtgag cgaccaagag cctccagccc
      541 ctgctcaagg tggggcccaa ggtaaggact cgccaccaca ggaggtcgag gccgtgtcct
      601 gggcgtcggg tcccgggtcc agcgagaacc ttaaactccc tccacagggg gaggctgaag
      661 ggggcagttc ccctagtggg ccaaacacac ccaggtcggc ccgtcagaac tttcgggacc
      721 tggtgttggg cagctccccg caactaaaga ggagcgtggg tcctggggac ggtaacgctg
      781 gaggtcgcag cagaggaggg ggcgactccg ataccgcatc gttagcttct tcgtccgcag
      841 aagaggagag cagcgtcggg gcctcggtta ccctggatcc cctggatcac gcctggatgc
      901 tctcagcttc cgagggcaag tgggacagcc tagaagggct gctcacttgt gagcccggcc
      961 tgctctcgaa gcgagacttc atcaccggct tcacttgtct ccactgggcc gccaagcacg
     1021 gcaggcaaga gctcctggcc atgttggtca actttgccac caaacaccag ctgccagtga
     1081 acatcaatgc caagtcgagc ggaggctaca ctgccctaca tttggcagcg atgcatgggc
     1141 atgtagaggt ggtgaagtta ctagtggggg cctacgacgc agatgtagac atcagggact
     1201 acagcgggag aaaggcctct cagtatctga gcgagagcat cgcagaggag ataaagaacc
     1261 tggtgggagc cctggatgaa gatgatggag acagccctgc cgcccgcggg ggtgggcgct
     1321 ggagactttc aaaggtgctc ccctcacaca tcactcacaa actctccccg gtcgtggaag
     1381 acggagctga acttcaccac cacgtccccg agggatggac tggaggaagc aaagcaaaag
     1441 attcaggtcg caaagcctcg ggcagctcaa gtggacggat gaagccacga ctcaacaaaa
     1501 tccgattccg aacccagatc attcacacca ctccctcctt cagggatgct aaaccgacac
     1561 tggaggaagg ggaggaggag gaggaggagg aggaggaaag gtctcttaga ggctactcat
     1621 cttcctttaa actgagaccg aagtccaatg tatttgggta aaataattcg cgctagaaat
     1681 gctaaggctt atttgtcttc aaggtagaat aatactgggt atggataaga agtggaagca
     1741 gaaaaaacca aataaattat gcattttaac tttcgggctt ggggtggatc tgtaataatc
     1801 ctttcaggat agcattctga ggcaagaaaa tgtctctgaa gtgattcata atgcactgat
     1861 ttgtgcctct tccccaaccc cacccaggta acctggaact tgtgagaact ggaattattg
     1921 atgactaaga gtcccatttg ctttttaatc attgcgagat accatgcaaa gtaagggcca
     1981 tgagaaaatg caaaacacat ggtattgcaa actgaacctg ctaatgtttg taagtgaatg
     2041 aaactagagg ctgccctgat tttctgctat gcacacttgc ttaaggtgct aaagaagggc
     2101 aaggtcagag ttgaaatgtg aaactacaaa ggaggattat gtgaacggag atgggaatcc
     2161 cactgataac gtcttacttg tattgtaagt agcggttccc aatttttttt ttaaagcagt
     2221 tttactttta atcactgaac tgaagaagga agcagcactt gctttcaagt tactgtaatc
     2281 tggtttgtgc ctatataaca ctatacggta cattattaac tacaaacttg gttcaataga
     2341 agaagacatt tatttaaata gatgagcaca tagcaaccta tggtactttt tttaaatgtg
     2401 tatgtcttgt tgattatcac caactagttt tgctactctt aaattctgaa ctttctgagg
     2461 tttgtattct ggggattttg tttgtttgtt tgtttatgaa gcttacaata ctttacttat
     2521 cacctaaact gatttactta tcacctaaac cattccttgt ttagaaaata gcaaaatatg
     2581 cttctgtgaa gtaattatta aatcagttta atatgtttct catgtaagag acattttaat
     2641 tttattaata cattcatagc ctctatgctt tgtagcaaca ttttacaaat gtgcaaaata
     2701 ctaaatcttt cacttttctt atgtttcttt gtatgtactc aaagaactat agtgtggtta
     2761 cagaaagcct agatagtctg cccatttaaa aatgggcaat ttattatatt ttataaaaag
     2821 gaagagaaat ggggccattt ctgtatttca atgctgctag ctattgaatt tccttatata
     2881 tagttgaaaa atactattcc ttaaaattaa agacttttac aactgtgatc cgtaattaca
     2941 ttccattcac ttgtgctaag agtaaatggc tttataatta ttttaaaatt taacttacaa
     3001 acatattaaa tcttataaca agagtagaaa cttctgtggg agactggttt gaccaaatcc
     3061 ttctctctag tctttctggc ctacaacata gagggcagag taagcagcca agtcctcaga
     3121 gtcgagggga ctgcgtggtt atacagagct cacagcattc tgttgttaac tggcctcccc
     3181 aagtcataga gatttctaac aaatttgtca catctcaaaa tagcacttct ttaaatgtga
     3241 attgaagatg ctcatgaaat atataagttg tggctcagta ggtcagagca cttgttctgc
     3301 aagcatgagg atctgtgact gaatccccag catccatcta atagggtatg catagctgag
     3361 ggtatgagta acctaacatg aggaactgag acaggcagag cctcagagcc cagtggccag
     3421 ccagcctacc tgaaagtagt gacttctgga tcggggaggc tatctcaagg cagtaagaaa
     3481 ggcatcaagg aagtcacctg acattctact tctatcttca gaataagcac acgtggggct
     3541 cccaaacatt ctcatgccta cactacacac aaacacacat acacacataa gttgctaccc
     3601 acttatgtgc ctttatcttt gttttaggat ttaagtagat cgggtacatt gataagcact
     3661 ttttctgtac acttaagtga aaagccaatg taaaaagcaa tcatgtgttc catgtcttag
     3721 acgtgttagc tatatctagt gccaaataag cttacagttc tcatctagga cttttaaatt
     3781 ccatgctaag ataaggcaac tatcattaac ttgcttttca aactaaatgt ttaaaactat
     3841 gataaaacat taaatttttt ctggagtcat tcctgggcag gccaaacagc tcagcagatg
     3901 aaagtggtta tcttacaagc ttaaagacct gagtttggcc ctagaaccca cagtggatgg
     3961 agaaaactta actcttaaaa attgtcctcc agcttcccca tgtgcaccat ggtgtctgca
     4021 cacctgtact catacaaaca cacaaagcta attagtttaa atttcaaaag ccccgaaagg
     4081 aactccgggc attccttgtc ataatgtagc ttattcagta aatatgacat tttaagctac
     4141 ttaacaccat tcctcttttt ttttcaatgt ccaaatcaag agtagaaaaa aatgattcgt
     4201 ataatttaat aaatatgaag ttgtatctct caataatggc aatagataaa tacaggcatc
     4261 tgttgacaag agactgtgta gtttcaaaac aagtttatgt gtcctccagg tacgcttgaa
     4321 actatgaatg tcagtttgct tttatggtat gtaaagtgca gctaacgggg tactagttta
     4381 ttcacacctg aaatattgga atgtgatgtt tgtcttttgt tttttggttg tttttttttt
     4441 aagtaagtga aagtttgtga gtttaagaat ctgtgaagtt tgtggaaata aaatgtccat
     4501 cgtagagatc aaa
//
