LOCUS       NM_175270               3930 bp    mRNA    linear   ROD 12-JUN-2024
DEFINITION  Mus musculus sosondowah ankyrin repeat domain family member B
            (Sowahb), mRNA.
ACCESSION   NM_175270
VERSION     NM_175270.5
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3930)
  AUTHORS   Sun,M., Mondal,K., Patel,V., Horner,V.L., Long,A.B., Cutler,D.J.,
            Caspary,T. and Zwick,M.E.
  TITLE     Multiplex Chromosomal Exome Sequencing Accelerates Identification
            of ENU-Induced Mutations in the Mouse
  JOURNAL   G3 (Bethesda) 2 (1), 143-150 (2012)
   PUBMED   22384391
REFERENCE   2  (bases 1 to 3930)
  AUTHORS   Yokoyama,S., Ito,Y., Ueno-Kudoh,H., Shimizu,H., Uchibe,K.,
            Albini,S., Mitsuoka,K., Miyaki,S., Kiso,M., Nagai,A., Hikata,T.,
            Osada,T., Fukuda,N., Yamashita,S., Harada,D., Mezzano,V., Kasai,M.,
            Puri,P.L., Hayashizaki,Y., Okado,H., Hashimoto,M. and Asahara,H.
  TITLE     A systems approach reveals that the myogenesis genome network is
            regulated by the transcriptional repressor RP58
  JOURNAL   Dev Cell 17 (6), 836-848 (2009)
   PUBMED   20059953
REFERENCE   3  (bases 1 to 3930)
  AUTHORS   Sherwood,R.I., Jitianu,C., Cleaver,O., Shaywitz,D.A., Lamenzo,J.O.,
            Chen,A.E., Golub,T.R. and Melton,D.A.
  TITLE     Prospective isolation and global gene expression analysis of
            definitive and visceral endoderm
  JOURNAL   Dev Biol 304 (2), 541-555 (2007)
   PUBMED   17328885
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC125233.4.
            
            On Dec 27, 2021 this sequence version replaced NM_175270.4.
            
            ##Evidence-Data-START##
            Transcript is intronless :: AK137429.1, AK033423.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-3930              AC125233.4         46973-50902
FEATURES             Location/Qualifiers
     source          1..3930
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="5"
                     /map="5 47.29 cM"
     gene            1..3930
                     /gene="Sowahb"
                     /gene_synonym="5730467H21Rik; Ankrd56"
                     /note="sosondowah ankyrin repeat domain family member B"
                     /db_xref="GeneID:78088"
                     /db_xref="MGI:MGI:1925338"
     exon            1..3930
                     /gene="Sowahb"
                     /gene_synonym="5730467H21Rik; Ankrd56"
                     /inference="alignment:Splign:2.1.0"
     CDS             194..2476
                     /gene="Sowahb"
                     /gene_synonym="5730467H21Rik; Ankrd56"
                     /note="Hypothetical ankyrin repeat
                     profile/ankyrin-repeat/ankyrin repeat region circular
                     profile/yeast DNA-binding domain containing protein
                     (UniProt|Q8BZW2, evidence: FASTY, 100%ID, 100%length,
                     match=2280); putative; ankyrin repeat domain-containing
                     protein 56; ankyrin repeat domain 56; protein sosondowah
                     homolog B"
                     /codon_start=1
                     /product="ankyrin repeat domain-containing protein SOWAHB"
                     /protein_id="NP_780479.1"
                     /db_xref="CCDS:CCDS19435.1"
                     /db_xref="GeneID:78088"
                     /db_xref="MGI:MGI:1925338"
                     /translation="MAGELSQEALLDFLCQAGGRVRNAELLSHFKSFLRDPHVSPGQL
                     QERRERFKGFVNSVAAVRQDPDGTKYVVLKRRYRDLLGEEGLQRPGPVDGKPRGHRRR
                     DPEPQKPPAGAGTQVDVGGSAQKVAGPDPSPEDSPNQRTPEPEAAQARGRCAAVGTRG
                     RCCWECQQNGWGQSTGQPLPEDLGDPAVACEKPERAAPARDDLGAPGWLREGEAAEHA
                     PGSVPPVWPPTAVEAAGSPTSPPALPPHPAPSREPLELFTAGSPNHSTQQLQQQHQRT
                     QEWVARYLQVPEPEIQAPTRAWSVLPDNFLQLPSETAFGVSETSSALPEPALSFHSLL
                     PVVLDESSESWPGNAPSTVFRSIRCQLSLQDLNDFVEQESHGSEESSSGPKESPGTPE
                     EGLQPVLRTSSWGELRDPVEDLFLPPNDSPCLIRRDLGYRGNAPSFRKVPTVAKSLGD
                     HPQEPFPALKFRRSVRRSSRTGRTKSPSSSDEEHPDEDLWKRSRRPPRSRKPSKAGAL
                     PSPRVDAVLVQKLADANAVASQPHSSWIPSRDGSAALIPHRPSEHRSPLVPLDTREHE
                     WIVRLASGSWLHVLTLFWEDPQLALHRDFLTGYTALHWIAKHGDLCALQDLVSGAQKA
                     GIALDVNVRSSCGYTPLHLAAIHGHQGVIKLLVQRLASRVNIRDCSGKKPWQYLNSNV
                     SGETWQLLGAPRGKPIFPVYSLVQSSSPARKVKSREVSRNVTRKTSLAALLKTQHNKW
                     KLASQYEKIHTSKEREEYSD"
     regulatory      3862..3867
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Sowahb"
                     /gene_synonym="5730467H21Rik; Ankrd56"
                     /note="hexamer: AATGAA"
     polyA_site      3883
                     /gene="Sowahb"
                     /gene_synonym="5730467H21Rik; Ankrd56"
                     /note="major polyA site"
     polyA_site      3930
                     /gene="Sowahb"
                     /gene_synonym="5730467H21Rik; Ankrd56"
ORIGIN      
        1 acccgcccct agggaccctc ggccctcctg gagcgccctg gggatgcggg cggcgccggc
       61 ctccgcggct gatggaggcg ggtggcgcca ccctgggcgc aggtgacact ctccaggcct
      121 gggtttcggt cgaaggggaa gtgcgctggg agctcgagac gcagccgccc cagggactaa
      181 ggacccagca gcgatggccg gagagctgag ccaggaggca ctgctggact ttctgtgcca
      241 ggccgggggc cgagtgcgta acgcagagct gctgagccac ttcaagagct tcctgcgcga
      301 ccctcacgtg tctccaggcc agctgcagga gcgtcgcgag cgcttcaagg gcttcgtgaa
      361 ctcggtggcc gcagtgcgcc aggaccccga cggcaccaag tacgtggtgc tcaagaggag
      421 gtacagggac ctactggggg aggagggcct gcagcgaccg ggccctgtag atggaaagcc
      481 gcggggccac cgccgccgtg acccggagcc gcagaagccg ccggcaggtg cggggaccca
      541 ggtggacgta ggtggcagcg cgcagaaggt ggccgggcca gaccccagcc cggaggacag
      601 cccgaaccag aggacaccgg agccagaggc tgctcaagcc agaggcaggt gtgcggctgt
      661 ggggacgcga ggacgctgct gctgggagtg ccagcagaac ggctggggac agtccaccgg
      721 acagccgctg ccagaagatc tcggagaccc tgcagtcgcc tgcgagaagc cggagcgcgc
      781 tgcacctgcc cgggatgacc tcggagctcc ggggtggctg agggaaggag aggccgccga
      841 gcacgcgcct ggatctgtac cgcctgtctg gcctccgacc gccgtcgagg ctgctggcag
      901 cccgacgtcc ccgcctgctc tcccgcccca cccggcgccc tccagagagc cactggagct
      961 gtttaccgcc ggctccccga accattcaac ccagcagctg cagcaacagc accagcgcac
     1021 tcaagagtgg gtagccagat acctgcaggt gcctgagccc gagatccagg cgcccactcg
     1081 cgcctggtcg gtgttgccag acaacttcct ccagctacct tcagaaaccg cctttggggt
     1141 ctcggagacc agctcggcgc tgccagagcc cgctctgtct tttcattctc tccttcccgt
     1201 ggttctcgat gagtcctcag aatcctggcc agggaacgct ccatctaccg tctttcgaag
     1261 cattcgttgt cagctgtccc tccaggatct gaatgacttt gtggagcaag agagccatgg
     1321 aagtgaggag agcagcagtg gacccaaaga atctcccgga acccccgaag aggggctgca
     1381 acctgtcttg agaacttcct cctgggggga gctcagggat ccagttgagg atctgttttt
     1441 gccaccaaac gacagccctt gcctgatccg gcgggacctc ggatatagag ggaatgcgcc
     1501 cagttttcgg aaggtcccaa cagtggctaa aagccttgga gaccaccccc aagagccctt
     1561 ccctgccctc aagttccgaa ggtctgtcag gaggagctct cgaacaggaa gaaccaaatc
     1621 tccttcttcc tcagacgagg agcatcctga tgaggacttg tggaaaagga gtcggcgccc
     1681 acctcggtcc aggaaacctt ccaaggcagg agccctgccc agcccaaggg tggatgctgt
     1741 tttggtacag aaattggcag atgctaatgc tgtggccagt cagccacact cttcatggat
     1801 cccaagcagg gatggatctg cagccttgat accccacaga ccttctgagc acaggtcccc
     1861 ccttgtccct ctagacacca gggagcatga gtggattgtg aggcttgcca gtggttcctg
     1921 gcttcacgtg ctgactttgt tctgggagga cccccagctg gctttgcaca gagacttcct
     1981 gactgggtac acagccttgc actggatagc aaagcatggt gacctgtgtg cccttcagga
     2041 tttggtctct ggagcccaga aggcgggcat tgcactagat gtaaatgtga ggtccagttg
     2101 tggctatacc ccactgcacc ttgcagctat tcacgggcac cagggagtca tcaaattgct
     2161 agtgcaaaga ctggcttctc gggtgaacat tcgggactgc agtggcaaga agccatggca
     2221 gtatctgaac agtaacgtct ctggggaaac gtggcagctc ctgggtgcac cccggggcaa
     2281 acctatcttc cctgtctatt ccttagtcca aagctcttcc ccagccagga aggtcaagag
     2341 ccgggaagtg tctagaaatg tcacccggaa gacttccttg gctgctttgc tcaaaactca
     2401 gcacaacaaa tggaaattgg ccagccaata tgagaaaatc cacacctcaa aggagagaga
     2461 agagtatagt gactgaggtg ggcttttttc tccaagaggc gcacgcatgc gcgcgcacac
     2521 acacacacac acacacacac acacacacac acacactccc caagctacta agtaggtgga
     2581 gagaacccaa gggaaacaga aactgttagg agttgataaa gattgaggag cagtgaaatg
     2641 gtgtcctcaa gggtcatctc aatttcttga aggctcatat gtttggactg tgaaatgtgg
     2701 accaaagctg atccaggcac tcaagcctgc gaagggttcc tctctctcct gagccagcca
     2761 ggggtcaggg cacaggaagg cacagtattt tctgaggcag tgccagccag gccttactag
     2821 aaagggaaag gacgcgtcaa agggaggcaa ttcatggaag tgccggaact cacactcttc
     2881 tctggctgga agttctttgg cttctattca tctctagaat gaatcttggc tgagtggaaa
     2941 gcaccagttt gaagtcagat ggcttccctt cattttcttt atgtgccttt tggcaagtcc
     3001 agccagtgaa ataaaattgt tgctggagag tgtaacatct gactgaagag atttcctcag
     3061 tcctgcacct tcctgcgagc atcgtctaca gtgcttggtg taaactgatg actgtcttct
     3121 cggggtgtca ttgccattga ccggagaagc agatgagtga cattcaggaa tgattgtgac
     3181 tccactccct agacaaatga taacactcag actcggtttt gttttctgtt tgtttttgct
     3241 gttgtttgtt tttgtaccaa ctcaaagtga gctttccaag aggaaacgca ttttagttca
     3301 tctgtgttat gactgaaact cttcatcctg cagggggaaa ctccatgtgt agcaagcagg
     3361 gtcatctctg acagcgttcc acatgtctga agatcaaagt tggtactcgg gaaaagagct
     3421 ggattccctt tggggaagca gtaagtgtta aaagcatcag aactttgtga agctgctaag
     3481 tataacttta tttgcactaa actttttgcc aattaagatt aactattagc cctgaagtac
     3541 tgaatgtcta acaggaagtg tcccgttcgg ttctcaggaa gaggctaatc cttgcaggtc
     3601 cctggctgaa ggtgactctg tgaccccagg agaatgtgta aattctgaat gtaaatccaa
     3661 agagggctgg aaagttcatt gatcaaacag agattacttt ttttatggaa atagtttcat
     3721 gtgtgatgct gtattttttt aaaaagtatt cttctgttat tgtcctgcat taaaagacca
     3781 gcagattgat tgttatgtta ttatattgta tcaagctgtt attatattgt gtcaagctga
     3841 tcgttgctga tgttcttaca taatgaagtc tgtgattgtc caatcttttt tgtttcattg
     3901 taatctaact atataacttt gctgaaatca
//
