LOCUS       NM_183173               3644 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus sosondowah ankyrin repeat domain family member A
            (Sowaha), mRNA.
ACCESSION   NM_183173
VERSION     NM_183173.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3644)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 3644)
  AUTHORS   Kaiser,M., Wojahn,I., Rudat,C., Ludtke,T.H., Christoffels,V.M.,
            Moon,A., Kispert,A. and Trowe,M.O.
  TITLE     Regulation of otocyst patterning by Tbx2 and Tbx3 is required for
            inner ear morphogenesis in the mouse
  JOURNAL   Development 148 (8) (2021)
   PUBMED   33795231
REFERENCE   3  (bases 1 to 3644)
  AUTHORS   Thompson,C.L., Ng,L., Menon,V., Martinez,S., Lee,C.K.,
            Glattfelder,K., Sunkin,S.M., Henry,A., Lau,C., Dang,C.,
            Garcia-Lopez,R., Martinez-Ferre,A., Pombero,A., Rubenstein,J.L.R.,
            Wakeman,W.B., Hohmann,J., Dee,N., Sodt,A.J., Young,R., Smith,K.,
            Nguyen,T.N., Kidney,J., Kuan,L., Jeromin,A., Kaykas,A., Miller,J.,
            Page,D., Orta,G., Bernard,A., Riley,Z., Smith,S., Wohnoutka,P.,
            Hawrylycz,M.J., Puelles,L. and Jones,A.R.
  TITLE     A high-resolution spatiotemporal atlas of gene expression of the
            developing mouse brain
  JOURNAL   Neuron 83 (2), 309-323 (2014)
   PUBMED   24952961
REFERENCE   4  (bases 1 to 3644)
  AUTHORS   Tucker,E.S., Segall,S., Gopalakrishna,D., Wu,Y., Vernon,M.,
            Polleux,F. and Lamantia,A.S.
  TITLE     Molecular specification and patterning of progenitor cells in the
            lateral and medial ganglionic eminences
  JOURNAL   J Neurosci 28 (38), 9504-9518 (2008)
   PUBMED   18799682
REFERENCE   5  (bases 1 to 3644)
  AUTHORS   Funatsu,N., Inoue,T. and Nakamura,S.
  TITLE     Gene expression analysis of the late embryonic mouse cerebral
            cortex using DNA microarray: identification of several region- and
            layer-specific genes
  JOURNAL   Cereb Cortex 14 (9), 1031-1044 (2004)
   PUBMED   15142957
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL596095.18 and AI451247.1.
            
            On Feb 10, 2007 this sequence version replaced NM_183173.1.
            
            CCDS Note: The coding region has been updated to extend the
            N-terminus to one that is more supported by available transcript
            and homology data.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-3485              AL596095.18        32703-36187         c
            3486-3644           AI451247.1         1-159               c
FEATURES             Location/Qualifiers
     source          1..3644
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="11"
                     /map="11 31.95 cM"
     gene            1..3644
                     /gene="Sowaha"
                     /gene_synonym="A830006N08Rik; Ankrd43"
                     /note="sosondowah ankyrin repeat domain family member A"
                     /db_xref="GeneID:237761"
                     /db_xref="MGI:MGI:2687280"
     exon            1..3618
                     /gene="Sowaha"
                     /gene_synonym="A830006N08Rik; Ankrd43"
                     /inference="alignment:Splign:2.1.0"
     CDS             289..1935
                     /gene="Sowaha"
                     /gene_synonym="A830006N08Rik; Ankrd43"
                     /note="ankyrin repeat domain-containing protein 43;
                     ankyrin repeat domain 43; protein sosondowah homolog A;
                     ankyrin repeat domain-containing protein SOWAHA"
                     /codon_start=1
                     /product="ankyrin repeat domain-containing protein SOWAHA
                     precursor"
                     /protein_id="NP_898996.2"
                     /db_xref="CCDS:CCDS24681.2"
                     /db_xref="GeneID:237761"
                     /db_xref="MGI:MGI:2687280"
                     /translation="MALAAAAAAAAAAAGVSQAAVLGFLREHGGQVRNSELLSRFKPL
                     LDAGDPRGRAARRDRFKQFVNNVAVVKELDGVKFVVLRKKPRPPEGPEAPLPSSPGVP
                     AALAQCAAVPAEDNCAPGAPHSPQRSGEPPEDSSAPSELQHTPETLPSEVTQVEAPSG
                     SAPQPGGPEDPALPRSSELARPASVPSGLALTSTESPGPEPAPPTAQVPPQKPCMLPV
                     RCVVPGPAALRIRAEEQGLRRQRSEEPSPRGSPMLLRRLSVEESGLGLHLGPGRSPHL
                     RRLSRAGPRLLSPDTEEMPVAPLPSPAVPLEPTEHEWLVRTASGRWSHQLHGLLLRDR
                     GLAAKRDFMSGFTALHWAAKNGDREMALQLVEVARRGGAPVDVNARSHGGYTPLHLAA
                     LHGHEDAAVLLVVRLGAQVHVRDYSGRRAYQYLRPGSSYALRRLLGDPGLRSMMEPDA
                     ASGGSGSLVSRHPVQVAATILSSTTSAFLGVLADDLMLQDLARGLKKSSSFSKFLGAS
                     PMAPRKKTKIRGGLPSFTEISHRSTPGPLAGLVPSLPPPT"
     regulatory      2910..2915
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Sowaha"
                     /gene_synonym="A830006N08Rik; Ankrd43"
                     /note="hexamer: AACAAA"
     polyA_site      2953
                     /gene="Sowaha"
                     /gene_synonym="A830006N08Rik; Ankrd43"
     regulatory      3598..3603
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Sowaha"
                     /gene_synonym="A830006N08Rik; Ankrd43"
                     /note="hexamer: AATAAA"
     polyA_site      3618
                     /gene="Sowaha"
                     /gene_synonym="A830006N08Rik; Ankrd43"
                     /note="major polyA site"
ORIGIN      
        1 ctttcccatt ccctccgcac ctccagtggc agctgtcacc tgtaagccga gcgccgcaca
       61 ggggcatgga gcctggcgcc cattggacag gacctctcag cagcaaccta ccccccagtc
      121 tgggggccag gcctggcgca ggcggaggat aggagtccca ggtgcccttc gcccggagac
      181 ttctcagcac ggcggcgagg gcgtgactgc agtccagttt cggaaatcag agtcccaggt
      241 gagcccggct gggcggctgg ggcgaccccg gagtcgcaga caccgagaat ggcgctggca
      301 gccgccgccg ctgccgccgc tgctgccgca ggggtgagcc aggcggcggt gttgggcttc
      361 ctgcgggagc acggcgggca ggtgcgcaac tccgagctgc tgagccgctt caagccgctg
      421 ctggacgctg gggacccacg gggccgcgcg gcccgtaggg accgcttcaa gcagttcgtc
      481 aacaacgtgg ccgtggtgaa ggagctggat ggggtcaagt tcgtggtgct gagaaagaag
      541 ccccggccgc cggaaggacc cgaggcccca ctcccctcca gccctggagt gccagccgcg
      601 ctggcccagt gcgctgctgt cccagcggag gacaactgtg cccccggggc tccccactcc
      661 ccacagcgat caggagaacc gccggaggac tcgtccgcac catccgagct acagcacacc
      721 cctgagaccc taccctcaga ggtcacccag gttgaggcgc catcaggctc agcgccacag
      781 cccggggggc cggaggatcc ggcgctacct cggtcctcgg agctagcccg acccgccagc
      841 gtgccgtcgg ggctggccct gacgagcaca gagtcgccag gcccggagcc tgcacctccc
      901 acggcgcaag tgccaccgca gaagccttgc atgctgccgg tgcgctgcgt cgttcctggc
      961 cccgcggcgc tgcggatccg cgcggaggag cagggcctgc gccggcagcg ctcggaggag
     1021 ccgagcccac ggggctcccc gatgctcctg cggaggcttt cggtagagga gtcgggtctg
     1081 ggactccacc tgggacccgg ccgttccccg catctcaggc gcctgtcccg cgccggtccg
     1141 cgcctgctga gtccggacac ggaggagatg cccgtcgcgc cgctaccgtc acccgcggtg
     1201 cccctggagc ccacggagca cgagtggctg gtgcgcacgg ccagcggtcg ttggagtcac
     1261 cagctgcacg ggttgctctt gcgggaccgc ggcctggctg ccaagcgcga cttcatgtcc
     1321 ggcttcaccg cgctacactg ggcggccaag aacggcgacc gggagatggc tttacagctg
     1381 gtggaggtgg cgcggcgtgg aggcgcgccc gtggacgtga acgcgcgctc tcacggtggc
     1441 tacacgccgc tgcacctggc ggctctgcac ggccacgagg atgctgctgt gctgctagtg
     1501 gtgcgcttgg gtgcccaagt gcacgtccgc gactacagcg gccggcgtgc ctaccagtac
     1561 ctacggcctg gctcctccta cgcgctgagg cgtttactgg gtgaccctgg cctgcgatct
     1621 atgatggagc ctgatgcggc cagtggtggc agtgggagcc ttgtgtctcg gcaccccgtg
     1681 caggtagccg ccaccatcct cagctccacc actagtgcgt ttctgggcgt cctggccgat
     1741 gacttgatgc tccaggacct ggctcgtggc ttgaagaagt caagttcctt cagcaagttc
     1801 ttgggtgcct cgcccatggc tccccgaaaa aagaccaaga ttcgcggtgg cctgccgtcc
     1861 ttcaccgaaa tctctcatcg atccactcca ggacctttag ctggtttagt gcccagtctg
     1921 ccccctccaa cctgaatggc attggagcta ccacctacca gggcctgtgg cacgctgtct
     1981 aagcctgtcc aagacaggcc ccaaaccggc agtctgtctc atttccgatt ttatctattg
     2041 cagcctggtg taaccagatg ggcctccacc ttctgtttga aatttgacgt gcctacagag
     2101 atgggattct ttttcccccg ttagagaaac caagcagtca tgcccgatct tgggaggaga
     2161 cttgaagttt agggtcaaag gttaaggggc agcagctggt ctggcccctg gaggtgttaa
     2221 ccagaggcct ctgggtggac acattcccaa atcagaagta gagggtggct ttccagatgt
     2281 tcaaagatgg cgacttaaga tctgcagtgg ctttgtaatt tgatgctttt attctgtttt
     2341 taaattagaa tggggtacag caactttgat aatacctttg aaattctatt tttttccatt
     2401 tttaggcaaa gtagtaagac actttcagtt ttttgctaaa tattttggaa atttatcttt
     2461 taaagagatg gttgagtcta aaagaaatta gtcctaagcc aacaacacta aagcttatct
     2521 acctcattgt aggcagtaca gattctggaa tcttgaacat ggagtaacta ttgtgagcct
     2581 aatgaatgta actaatccca attatactgt gaatgtcgaa tattgagaaa caagggtatg
     2641 gttgggcttg tgagccatgt ttttaatcct agcacttggg aggcagggac aggcagatct
     2701 ctgtgagttt aagaccaacc tggtctacag agcaagttct aggccagcca gggctacaca
     2761 gagagactct gactcaaaac aaaacaaaca acctccgtgc acacacacac acggacaaag
     2821 acagacagac agacagaaac acacacacac acacaaatcc cacaccagaa gaaaaaaaaa
     2881 cctcaaagtg gacagaaaat gaacaaacaa acaaaagtgt atcttgagag tgaaagtgaa
     2941 gtgatttaac gcagaaagaa cgagacgttt tggtaaatac ttttaaacta ctccggaaca
     3001 tgtgttcatc actaaccggt ggctgctttg atttggcatg ccattttaat ttttttttaa
     3061 ttatgattta attgtgaatt ctgaatccat agttttcagt gcaatgggtg actgactagt
     3121 caaacaaaaa aagaagttat tataccagaa ggaaaaaaaa ctgataaata gaaactgaag
     3181 tgattgctac ttttttatat gaaagttctg aacaaataag tatgtgatat tcatttttca
     3241 aaaaccattt gaaatagcaa atgtagagca gagacctcga tgagtggttt aacttctgcc
     3301 ccttcgttcc ttcctatgaa tggggcaggc tcatgggccc cgaggtctgg gtgggcacag
     3361 gagaactgta aaagtaatcc cccccctctg aggtatgaca tctctttgct cagtcaactt
     3421 tttgtatgaa atcatgatat attactgttt ttgaaaatta tgtttgcatg tcatcagtca
     3481 tactgaatgg ttcttgtggc acatggagta tggcttcctt tcctatattt gtcagtgaga
     3541 cctttgaaat cattaaaggc atcctaatcg tcaattatgg aacaatgtaa gcaatgaaat
     3601 aaatagtttc tggttttaaa aaaaaaaaaa aaaaaaaaaa aaaa
//
