LOCUS       XM_006497876             864 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus spermatogenesis and oogenesis specific
            basic helix-loop-helix 1 (Sohlh1), transcript variant X2, mRNA.
ACCESSION   XM_006497876
VERSION     XM_006497876.3
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000068.8) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jun 22, 2016 this sequence version replaced XM_006497876.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..864
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="2"
     gene            1..864
                     /gene="Sohlh1"
                     /gene_synonym="Gm110; Nohlh"
                     /note="spermatogenesis and oogenesis specific basic
                     helix-loop-helix 1; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 7 ESTs, and 96% coverage
                     of the annotated genomic feature by RNAseq alignments,
                     including 1 sample with support for all annotated introns"
                     /db_xref="GeneID:227631"
                     /db_xref="MGI:MGI:2684956"
     CDS             131..706
                     /gene="Sohlh1"
                     /gene_synonym="Gm110; Nohlh"
                     /codon_start=1
                     /product="spermatogenesis- and oogenesis-specific basic
                     helix-loop-helix-containing protein 1 isoform X2"
                     /protein_id="XP_006497939.1"
                     /db_xref="GeneID:227631"
                     /db_xref="MGI:MGI:2684956"
                     /translation="MLDTDQSQATERESELLERPSSCPGHRQSALSFSEPESSSLGPG
                     LPPWIPHSWQPATPEASDIVPGGSHQVASLAGDPESSGMLAEEANLVLASVPDARYTT
                     GAGSDVVDGAPFLMTTNPDWWLGSVEGRGGPALARSSPVDGAEPSFIGDPELCSQELQ
                     AGPGELWGLDFGSPGLALKDEADSIFPDFFP"
ORIGIN      
        1 agcattagct gtgtaatagt gtcacacacc tgtgacatca ctgcttgtgc tcaaatgcct
       61 ttagatggtc ccttgagagc ctgctgtgac acaacattac acaggggtac aggatccccc
      121 atgctttggg atgctggata cagaccagag ccaggctact gagagagagt cagagctgct
      181 ggagagacct tcctcctgcc ctggtcatcg ccagagcgcg ttgtcattca gtgagccaga
      241 gtcttccagc ttgggtcctg ggctcccacc ctggatccct cactcatggc agccagccac
      301 tcccgaggca agtgacattg ttcctggtgg gtcacaccag gtggcatccc tggccgggga
      361 ccctgaatct tccggcatgc tggctgagga ggccaacttg gtcttggcat ctgtgcctga
      421 tgccaggtac accacagggg cagggtccga tgtggtggat ggagcaccct ttctgatgac
      481 caccaatcct gactggtggt tggggtcggt ggagggcaga ggaggcccag cccttgccag
      541 gagcagccca gtggatgggg cagagccaag cttcatcgga gaccctgagc tttgctccca
      601 ggagctccag gctggtcctg gagagctgtg gggtttggat tttggcagcc ctggcctggc
      661 cctgaaggat gaagcggaca gcatcttccc tgactttttc ccctgatagc tgagtccccc
      721 agagtttagt ttgctgggga gctgtcctgt gcctgggtgt tgtattttgg gcttggtttg
      781 cagctgaggc ctaatttgag ggagcctggc agggctgtga gtggagtttg tattaaagag
      841 gaaagtggtt tttctggcag aaac
//
