LOCUS       NM_175483               4564 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus sorting nexin 33 (Snx33), mRNA.
ACCESSION   NM_175483
VERSION     NM_175483.5
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 4564)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 4564)
  AUTHORS   Heiseke,A., Schobel,S., Lichtenthaler,S.F., Vorberg,I.,
            Groschup,M.H., Kretzschmar,H., Schatzl,H.M. and Nunziante,M.
  TITLE     The novel sorting nexin SNX33 interferes with cellular PrP
            formation by modulation of PrP shedding
  JOURNAL   Traffic 9 (7), 1116-1129 (2008)
   PUBMED   18419754
  REMARK    GeneRIF: SNX33 interferes with cellular PrP formation by modulation
            of PrP shedding
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AK142274.1.
            
            On Apr 6, 2007 this sequence version replaced NM_175483.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK142274.1, AK053761.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-4564              AK142274.1         2-4565
FEATURES             Location/Qualifiers
     source          1..4564
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="9"
                     /map="9 30.48 cM"
     gene            1..4564
                     /gene="Snx33"
                     /gene_synonym="E130307J07Rik; Sh3px3"
                     /note="sorting nexin 33"
                     /db_xref="GeneID:235406"
                     /db_xref="MGI:MGI:2443239"
     exon            1..3059
                     /gene="Snx33"
                     /gene_synonym="E130307J07Rik; Sh3px3"
                     /inference="alignment:Splign:2.1.0"
     exon            3060..4564
                     /gene="Snx33"
                     /gene_synonym="E130307J07Rik; Sh3px3"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gagaagcggc tctgggcgcc ggcaactggg ctgctgaaag ctcgcagctc cccgactccc
       61 gggtccattt cctggatccc ggccaccggg actgaaccgg agagagggag ggcgcccgcc
      121 agaaggaaag tgagcggaag gccggcggtg gcaccctggc cgcgggaggg cggagctgtg
      181 cggtccctga ccggccagga cgcacggaag tgcggtagag tttgttgaat tccgtagcct
      241 gctttccctc cctcatacct ccctccctct ctctccaccc ctcacctccc ctactgcttt
      301 agcctccttc ctcggaacgc catctcctgg actcctcccc ccttctcttt tctttctttc
      361 tttttctttt ttctttttct ttttagtttt ttgaagggag ggtgaatgtt tgttttggac
      421 ttggcttcct gctggcagcg ctgaagggct gcgagtgagg ggcaaagagg caagaagctg
      481 gggctcagct agtccctctc gggtcggatc cagagggcat cgcggagaac gaacctacgg
      541 acggactgac aaacacccga ctacgccatc tgttcgacag agctctatct actgactgct
      601 gttgagtgtt ccggggcaca tcaggggcgg ggggtggtga tggtggaggt ttctcctagc
      661 gttacttctg gacaggggtt ctgagactct gatccgggtc agcttcatac tctgaaactg
      721 ccgaggaatt aggcaaacaa aagaggcact gagtgaaaga ggccagaagt tctttgcgct
      781 gcttgtcgcg cccccccttg ttatctgggg gcgggggctg gccatttgca gggcgggaag
      841 agggcaccag agctagcgag acggggtcgc accccctggg tcgagtagtt ttcagccggt
      901 tgtgcaagct ttggcccttg ttttcctggc ctggctcttt tggaggccgg acacatccac
      961 ccttggaatt ggttcaggac tctgctgtta ttctctttgc ccctcttgaa ttttctggat
     1021 tcttgaagac gcggtggccc gggaggagag aggaaggagg aaggagcaga tctccagaag
     1081 aatgtgagag cctcccaaag ccggagccag taagaacgga gagccagagg aggcagaacc
     1141 ttgcctgcgt tcctgggacc gtggtctgag ggtaaatctc ttctgttgta caacactgtt
     1201 ttagtggaaa gtgtgtgtct cgttctggtt ctagcagagc tgctttcttc aagtcatttg
     1261 acttttctgc ttggtgtgtg aggagggaga gacccgctcc tttccagggg ctgccaaggg
     1321 agaggagaaa gactgtggcc atgaccaacc cctccctgct tacaggcaga taccccaagg
     1381 cagtttctgg accatggaca cttctttgac caaaaggcag ctagacagca tctgtgcatg
     1441 ctgaggccct gcccaaagga cttggtaggg cttactagac tttgagctgc aagtacattt
     1501 tttttttttt ttttggacac cctgttgaac atcctgaatc tgggcaaggc attttccttc
     1561 cagtcttgac ctaacagata gctgagccat ggcactgaaa ggccgagccc tctatgattt
     1621 ccacagtgag aacaaggagg aaatcagtat ccagcaggac gaagagctgg ttatcttcag
     1681 tgagacctca ctggacggct ggctgcaggg acagaacagc cgtggggaga cagggctctt
     1741 ccctgcttct tacgtcgaga ttgtccgtcc tggcatcagc accaaccatg tggactattc
     1801 caacagccct gcaggctccc tgggcaccca ggggagtttg tatagcagcc cgagtatggc
     1861 cagtccagcc aggagtggtg ggggcagcgg cttcctctca aacccaggaa gcttcgagga
     1921 tgatgatgat gatgattggg atgactggga tgatgggtgc acagtggtag aagagccact
     1981 agctggcggc ctaggtacca atgggcaccc tccactcaac ctctcctacc cgggtgccta
     2041 ccccaaccag catatggctt tccgacccaa ggcacccctg gaaaggcagg acagcctggc
     2101 gtctgccaag cggggcagtg tggtaggacg gaacctcaat cgtttctcgt gcttcgtacg
     2161 ctctggagtg gaggccttca tccttggtga tgtgcccatg atggccaaga ttgctgagac
     2221 ttactccatt gagatgggcc cacgtggccc tcagtggaag gccaaccccc acccatttgc
     2281 ctgctccata gaggacccca ccaaacagac caagttcaaa ggcattaaaa gttacatctc
     2341 ttacaagctt acacccaccc acgcaggctc gcctgtttac cggcgctaca aacactttga
     2401 ttggctgtac aaccgccttc tacacaagtt cacagtgatc tcagtgcccc acctgcctga
     2461 gaagcaggcc acaggccgct tcgaagagga cttcatcgag aagcgcaagc gaaggctcat
     2521 cctctggatg gaccacatga ccagccaccc tgtgctctcc cagtatgagg gcttccagca
     2581 cttcctcagc tgcctggatg acaagcagtg gaagatgggt aagcgccggg cagagaagga
     2641 tgagatggtg ggcgccagtt ttctgctcac tttccagatc cccacagagc accaggatct
     2701 gcaggatgta gaggaccgcg tggatacatt caaggctttc agtaagaaga tggatgacag
     2761 cgtcctacag cttagcaacg tggcggcgga gctggtgcgg aagcatgtgg ggggcttccg
     2821 caaggaattc cagaagctag gaagtgcctt ccaggccatt agccatgcct tccagatgga
     2881 ccctcccttt aggtctgatg ctctcaacaa tgccatttct cacactggcc ggacctatga
     2941 aaccgttggc gaaatgtttg cggaacagcc caagcacgac ctcttccaaa tgcttgacac
     3001 actgtctctc taccagggcc tactctccaa cttccctgac attatccacc tgcagaaagg
     3061 tgcctttgcc aaggtgaagg aaagccagcg catgagtgat gagggccgaa tggctcagga
     3121 agaggcagat ggcattcgca ggcgctgccg tgtggtaggc ttcgccctgc aggccgagat
     3181 gaaccatttc caccagcgcc gtgagctcga ttttaagcat atgatgcaaa gctacctgcg
     3241 ccagcagatt cttttctacc agcgggtagg ccagcagctg gagaagactc tccacatgta
     3301 tgaccacctc tgacagactc tgaccagctc tgcagggcct cttcccacct gtctattcca
     3361 ctcctgtcat tagcagtggc tctggtgccc ggggcgggtg aggtgagtgg cctgttcttt
     3421 ctaggagaag acaagggact tttgagaagt cctggtatcc ctggaatact ttcccctgac
     3481 tttagagata gatgaatggc agtagccctc tgagccaaag cctgggctgc tggtcagtcc
     3541 ctaaagatga agcttctctt gagcctatag tgcacactca tctggccacc acaccctgtt
     3601 cattccgtgg actccataga ctgctgtggc cttggctgag acatgggtga tcaaggctag
     3661 aacttgtctg tcctggaaga gccacttttc aagacaatag acttagcaaa caatgcagaa
     3721 tgagaggcga cacttaaaga ttcctggaaa ctcctcagag gaccacagaa ctctgctggt
     3781 tagggggaca cttcacggag taggtgacat tccggcagta tcttgaagag taacaaggac
     3841 ctgcaaaaga cagtaaatgg agtgaaggac attttgggca gaagagcgat gtggtccctc
     3901 ctcttaccat tcccaaagca agtttggtgt cctctctgtg ggttttgctc tgtatgacag
     3961 aggggaggga ccatccgtgc tctgtgctct ctgtctttcc ctgtcctacc catgcctctg
     4021 caggagggac tgcaggccaa ctccctccta taggccttgg attcctcaat atgttggttg
     4081 agggacacct ccctccccca cttttccttg attaggggac catgcaaata ctttcccttc
     4141 tgtaggctca aggtgctcaa tccagggagc actgggccct ggtggtgcct ttctggaggg
     4201 gaactttcaa aagttaccag cgtaactccc cattctccta gcaggtccag gcacctttgt
     4261 ttctgtggct tggtcttctc aaattactct tgttgcacag tgggaaggaa atctgaccga
     4321 aatcccagaa gctgggatct ctcgaccccc atgtgtggcc agactcactg gtcagtttgt
     4381 gcagtcaccc acctatgttt acatcctcca ggcattgctg ccctgtaacc ctcaggcctg
     4441 tgtgtggccc agtagctggt tgttgggaag tgaccctgcc cccccttgcc tccctgggaa
     4501 gccatgttct gctcctgggt cctgctgctt aactcttttc ttgataaacc ttttccagtt
     4561 aact
//
